RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 KIAA1210Q9ULL0 1709 aa13.18□□□□□ -0.3
DDB1-204ENST00000535147 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
DDB1-204ENST00000535147 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
DDB1-204ENST00000535147 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
DDB1-204ENST00000535147 FANCAO15360 1455 aa13.18□□□□□ -0.3
DDB1-204ENST00000535147 VWDEQ8N2E2 1590 aa13.17□□□□□ -0.3
DDB1-204ENST00000535147 MYOM2P54296 1465 aa13.17□□□□□ -0.3
DDB1-204ENST00000535147 MTHFSP49914 203 aa13.17□□□□□ -0.3
DDB1-204ENST00000535147 HOMEZQ8IX15 550 aa13.17□□□□□ -0.3
DDB1-204ENST00000535147 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
DDB1-204ENST00000535147 NOS1P29475 1434 aa13.17□□□□□ -0.3
DDB1-204ENST00000535147 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
DDB1-204ENST00000535147 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
DDB1-204ENST00000535147 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
DDB1-204ENST00000535147 PODXL2Q9NZ53 605 aa13.15□□□□□ -0.3
DDB1-204ENST00000535147 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.3
DDB1-204ENST00000535147 MROH1Q8NDA8 1641 aa13.15□□□□□ -0.3
DDB1-204ENST00000535147 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.31
DDB1-204ENST00000535147 INO80Q9ULG1 1556 aaPredicted RBP13.14□□□□□ -0.31
DDB1-204ENST00000535147 ADGRL1O94910 1474 aa13.14□□□□□ -0.31
DDB1-204ENST00000535147 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
DDB1-204ENST00000535147 SBNO2Q9Y2G9 1366 aa13.14□□□□□ -0.31
DDB1-204ENST00000535147 SHPRHQ149N8 1683 aa13.14□□□□□ -0.31
DDB1-204ENST00000535147 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
DDB1-204ENST00000535147 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
DDB1-204ENST00000535147 POGKQ9P215 609 aa13.14□□□□□ -0.31
DDB1-204ENST00000535147 KIF1BO60333 1816 aa13.13□□□□□ -0.31
DDB1-204ENST00000535147 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
DDB1-204ENST00000535147 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
DDB1-204ENST00000535147 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
DDB1-204ENST00000535147 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
DDB1-204ENST00000535147 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
DDB1-204ENST00000535147 VIRMAQ69YN4 1812 aaKnown RBP13.12□□□□□ -0.31
DDB1-204ENST00000535147 CFAP65Q6ZU64 1925 aaKnown RBP13.12□□□□□ -0.31
DDB1-204ENST00000535147 U2AF1L5P0DN76 240 aaPredicted RBP13.12□□□□□ -0.31
DDB1-204ENST00000535147 U2AF1Q01081 240 aaKnown RBP eCLIP13.12□□□□□ -0.312e-7■■□□□ 11.4
DDB1-204ENST00000535147 BECN1Q14457 450 aa13.12□□□□□ -0.31
DDB1-204ENST00000535147 WDR63Q8IWG1 891 aa13.12□□□□□ -0.31
DDB1-204ENST00000535147 EFCAB6Q5THR3 1501 aa13.11□□□□□ -0.31
DDB1-204ENST00000535147 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
DDB1-204ENST00000535147 NRXN1Q9ULB1 1477 aa13.11□□□□□ -0.31
DDB1-204ENST00000535147 GGT6Q6P531 493 aa13.11□□□□□ -0.31
DDB1-204ENST00000535147 C14orf93Q9H972 538 aaKnown RBP13.11□□□□□ -0.31
DDB1-204ENST00000535147 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
DDB1-204ENST00000535147 PPRC1Q5VV67 1664 aaKnown RBP13.1□□□□□ -0.31
DDB1-204ENST00000535147 TSR2Q969E8 191 aaKnown RBP13.1□□□□□ -0.31
DDB1-204ENST00000535147 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
DDB1-204ENST00000535147 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDB1-204ENST00000535147 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
DDB1-204ENST00000535147 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
DDB1-204ENST00000535147 MYO3AQ8NEV4 1616 aa13.09□□□□□ -0.31
DDB1-204ENST00000535147 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
DDB1-204ENST00000535147 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
DDB1-204ENST00000535147 ABCA9Q8IUA7 1624 aa13.09□□□□□ -0.31
DDB1-204ENST00000535147 ZNF518AQ6AHZ1 1483 aa13.09□□□□□ -0.31
DDB1-204ENST00000535147 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
DDB1-204ENST00000535147 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
DDB1-204ENST00000535147 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
DDB1-204ENST00000535147 MVPQ14764 893 aaKnown RBP13.08□□□□□ -0.32
DDB1-204ENST00000535147 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
DDB1-204ENST00000535147 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
DDB1-204ENST00000535147 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
DDB1-204ENST00000535147 FTSJ3Q8IY81 847 aaKnown RBP13.07□□□□□ -0.32
DDB1-204ENST00000535147 QRICH2Q9H0J4 1663 aa13.07□□□□□ -0.32
DDB1-204ENST00000535147 NPATQ14207 1427 aa13.06□□□□□ -0.32
DDB1-204ENST00000535147 ADGRB3O60242 1522 aa13.06□□□□□ -0.32
DDB1-204ENST00000535147 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
DDB1-204ENST00000535147 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
DDB1-204ENST00000535147 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
DDB1-204ENST00000535147 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
DDB1-204ENST00000535147 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
DDB1-204ENST00000535147 AAMPQ13685 434 aa13.05□□□□□ -0.32
DDB1-204ENST00000535147 KIDINS220Q9ULH0 1771 aa13.05□□□□□ -0.32
DDB1-204ENST00000535147 SETBP1Q9Y6X0 1596 aa13.05□□□□□ -0.32
DDB1-204ENST00000535147 SMC4Q9NTJ3 1288 aa13.05□□□□□ -0.32
DDB1-204ENST00000535147 EVC2Q86UK5 1308 aa13.04□□□□□ -0.32
DDB1-204ENST00000535147 TRIM27P14373 513 aa13.03□□□□□ -0.32
DDB1-204ENST00000535147 MFAP1P55081 439 aaKnown RBP13.03□□□□□ -0.32
DDB1-204ENST00000535147 GGNBP2Q9H3C7 697 aa13.03□□□□□ -0.32
DDB1-204ENST00000535147 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
DDB1-204ENST00000535147 SSH1Q8WYL5 1049 aa13.03□□□□□ -0.32
DDB1-204ENST00000535147 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
DDB1-204ENST00000535147 STK26Q9P289 416 aa13.03□□□□□ -0.32
DDB1-204ENST00000535147 ANKRD36BQ8N2N9 1353 aa13.02□□□□□ -0.32
DDB1-204ENST00000535147 ASXL2Q76L83 1435 aa13.02□□□□□ -0.32
DDB1-204ENST00000535147 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
DDB1-204ENST00000535147 PPLO60437 1756 aa13.01□□□□□ -0.33
DDB1-204ENST00000535147 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
DDB1-204ENST00000535147 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
DDB1-204ENST00000535147 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
DDB1-204ENST00000535147 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
DDB1-204ENST00000535147 CD109Q6YHK3 1445 aa13.01□□□□□ -0.33
DDB1-204ENST00000535147 SRPK2P78362 688 aaKnown RBP13□□□□□ -0.33
DDB1-204ENST00000535147 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
DDB1-204ENST00000535147 GZF1Q9H116 711 aaPredicted RBP13□□□□□ -0.33
DDB1-204ENST00000535147 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
DDB1-204ENST00000535147 ZMYM3Q14202 1370 aa12.99□□□□□ -0.33
DDB1-204ENST00000535147 A0A1W2PP64 1363 aa12.99□□□□□ -0.33
DDB1-204ENST00000535147 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
DDB1-204ENST00000535147 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms