RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
SCARB1-204ENST00000535005 ZNF335Q9H4Z2 1342 aaPredicted RBP17.15■□□□□ 0.34
SCARB1-204ENST00000535005 STRCP1A6NGW2 1772 aa17.14■□□□□ 0.33
SCARB1-204ENST00000535005 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
SCARB1-204ENST00000535005 NCOA3Q9Y6Q9 1424 aa17.13■□□□□ 0.33
SCARB1-204ENST00000535005 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-204ENST00000535005 TMF1P82094 1093 aa17.12■□□□□ 0.33
SCARB1-204ENST00000535005 SAFB2Q14151 953 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCARB1-204ENST00000535005 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
SCARB1-204ENST00000535005 PUS7Q96PZ0 661 aaKnown RBP17.1■□□□□ 0.33
SCARB1-204ENST00000535005 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
SCARB1-204ENST00000535005 ADGRB2O60241 1585 aa17.1■□□□□ 0.33
SCARB1-204ENST00000535005 EVC2Q86UK5 1308 aa17.09■□□□□ 0.33
SCARB1-204ENST00000535005 C11orf95C9JLR9 678 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-204ENST00000535005 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.33
SCARB1-204ENST00000535005 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.33
SCARB1-204ENST00000535005 TMEM94Q12767 1356 aa17.08■□□□□ 0.33
SCARB1-204ENST00000535005 DISP3Q9P2K9 1392 aa17.08■□□□□ 0.33
SCARB1-204ENST00000535005 CDCA8Q53HL2 280 aa17.08■□□□□ 0.33
SCARB1-204ENST00000535005 LTBP4Q8N2S1 1624 aa17.08■□□□□ 0.32
SCARB1-204ENST00000535005 TULP4Q9NRJ4 1543 aa17.07■□□□□ 0.32
SCARB1-204ENST00000535005 WASLO00401 505 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-204ENST00000535005 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
SCARB1-204ENST00000535005 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
SCARB1-204ENST00000535005 RBM33Q96EV2 1170 aaKnown RBP17.05■□□□□ 0.32
SCARB1-204ENST00000535005 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
SCARB1-204ENST00000535005 WASHC2AQ641Q2 1341 aa17.05■□□□□ 0.32
SCARB1-204ENST00000535005 C19orf44Q9H6X5 657 aa17.05■□□□□ 0.32
SCARB1-204ENST00000535005 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
SCARB1-204ENST00000535005 CDC42BPGQ6DT37 1551 aa17.04■□□□□ 0.32
SCARB1-204ENST00000535005 DCCP43146 1447 aa17.03■□□□□ 0.32
SCARB1-204ENST00000535005 C14orf37Q86TY3 774 aa17.03■□□□□ 0.32
SCARB1-204ENST00000535005 XIRP1Q702N8 1843 aaKnown RBP17.01■□□□□ 0.31
SCARB1-204ENST00000535005 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
SCARB1-204ENST00000535005 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
SCARB1-204ENST00000535005 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
SCARB1-204ENST00000535005 MSH6P52701 1360 aa17■□□□□ 0.31
SCARB1-204ENST00000535005 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
SCARB1-204ENST00000535005 FMN2Q9NZ56 1722 aa16.98■□□□□ 0.31
SCARB1-204ENST00000535005 CADPS2Q86UW7 1296 aa16.98■□□□□ 0.31
SCARB1-204ENST00000535005 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
SCARB1-204ENST00000535005 PRR36Q9H6K5 1346 aa16.97■□□□□ 0.31
SCARB1-204ENST00000535005 ATF3P18847 181 aa16.97■□□□□ 0.31
SCARB1-204ENST00000535005 CCDC61Q9Y6R9 512 aa16.97■□□□□ 0.31
SCARB1-204ENST00000535005 ATP7BP35670 1465 aa16.97■□□□□ 0.31
SCARB1-204ENST00000535005 NINLQ9Y2I6 1382 aa16.97■□□□□ 0.31
SCARB1-204ENST00000535005 MIER1Q8N108 512 aa16.96■□□□□ 0.31
SCARB1-204ENST00000535005 POLR3GLQ9BT43 218 aa16.96■□□□□ 0.3
SCARB1-204ENST00000535005 USP32Q8NFA0 1604 aa16.94■□□□□ 0.3
SCARB1-204ENST00000535005 PLEKHG3A1L390 1219 aa16.93■□□□□ 0.3
SCARB1-204ENST00000535005 MST1RQ04912 1400 aa16.93■□□□□ 0.3
SCARB1-204ENST00000535005 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
SCARB1-204ENST00000535005 SLC12A5Q9H2X9 1139 aa16.92■□□□□ 0.3
SCARB1-204ENST00000535005 CABP1Q9NZU7 370 aa16.92■□□□□ 0.3
SCARB1-204ENST00000535005 MYOM1P52179 1685 aa16.92■□□□□ 0.3
SCARB1-204ENST00000535005 TOPAZ1Q8N9V7 1692 aa16.92■□□□□ 0.3
SCARB1-204ENST00000535005 C1orf167Q5SNV9 1468 aa16.92■□□□□ 0.3
SCARB1-204ENST00000535005 PPIP5K1Q6PFW1 1433 aa16.91■□□□□ 0.3
SCARB1-204ENST00000535005 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
SCARB1-204ENST00000535005 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
SCARB1-204ENST00000535005 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
SCARB1-204ENST00000535005 ITSN1Q15811 1721 aa16.89■□□□□ 0.29
SCARB1-204ENST00000535005 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
SCARB1-204ENST00000535005 CERKQ8TCT0 537 aa16.89■□□□□ 0.29
SCARB1-204ENST00000535005 PANK3Q9H999 370 aa16.89■□□□□ 0.29
SCARB1-204ENST00000535005 SLAIN2Q9P270 581 aa16.89■□□□□ 0.29
SCARB1-204ENST00000535005 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
SCARB1-204ENST00000535005 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
SCARB1-204ENST00000535005 TERF2IPQ9NYB0 399 aa16.88■□□□□ 0.29
SCARB1-204ENST00000535005 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
SCARB1-204ENST00000535005 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
SCARB1-204ENST00000535005 POLR3AO14802 1390 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-204ENST00000535005 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
SCARB1-204ENST00000535005 ESCO1Q5FWF5 840 aa16.86■□□□□ 0.29
SCARB1-204ENST00000535005 ORAI2Q96SN7 254 aa16.86■□□□□ 0.29
SCARB1-204ENST00000535005 ZNF692Q9BU19 519 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-204ENST00000535005 HDGFL2Q7Z4V5 671 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-204ENST00000535005 ACEP12821 1306 aa16.85■□□□□ 0.29
SCARB1-204ENST00000535005 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-204ENST00000535005 A0A1W2PP64 1363 aa16.85■□□□□ 0.29
SCARB1-204ENST00000535005 PMFBP1Q8TBY8 1022 aa16.84■□□□□ 0.29
SCARB1-204ENST00000535005 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
SCARB1-204ENST00000535005 KIF1AQ12756 1690 aa16.83■□□□□ 0.28
SCARB1-204ENST00000535005 TOM1O60784 492 aa16.83■□□□□ 0.28
SCARB1-204ENST00000535005 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
SCARB1-204ENST00000535005 BRINP3Q76B58 766 aa16.82■□□□□ 0.28
SCARB1-204ENST00000535005 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-204ENST00000535005 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
SCARB1-204ENST00000535005 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
SCARB1-204ENST00000535005 USP6P35125 1406 aa16.8■□□□□ 0.28
SCARB1-204ENST00000535005 SSH2Q76I76 1423 aa16.8■□□□□ 0.28
SCARB1-204ENST00000535005 EDC4Q6P2E9 1401 aaKnown RBP16.8■□□□□ 0.28
SCARB1-204ENST00000535005 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
SCARB1-204ENST00000535005 FOXO3O43524 673 aa16.79■□□□□ 0.28
SCARB1-204ENST00000535005 KNSTRNQ9Y448 316 aa16.79■□□□□ 0.28
SCARB1-204ENST00000535005 NSD3Q9BZ95 1437 aa16.78■□□□□ 0.28
SCARB1-204ENST00000535005 NPHP3Q7Z494 1330 aa16.78■□□□□ 0.28
SCARB1-204ENST00000535005 NPC1L1Q9UHC9 1359 aa16.78■□□□□ 0.28
SCARB1-204ENST00000535005 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
SCARB1-204ENST00000535005 PSME1Q06323 249 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms