RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 POTEAQ6S8J7 498 aa34.11■■■■□ 3.05
YIF1A-213ENST00000534374 DHX57Q6P158 1386 aaKnown RBP34.11■■■■□ 3.05
YIF1A-213ENST00000534374 SHPRHQ149N8 1683 aa34.1■■■■□ 3.05
YIF1A-213ENST00000534374 DDX17Q92841 729 aaKnown RBP34.09■■■■□ 3.05
YIF1A-213ENST00000534374 KNDC1Q76NI1 1749 aa34.07■■■■□ 3.04
YIF1A-213ENST00000534374 DCAF11Q8TEB1 546 aa34.05■■■■□ 3.04
YIF1A-213ENST00000534374 CDC42BPGQ6DT37 1551 aa34.05■■■■□ 3.04
YIF1A-213ENST00000534374 PLEKHH1Q9ULM0 1364 aa34.04■■■■□ 3.04
YIF1A-213ENST00000534374 MEX3CQ5U5Q3 659 aaKnown RBP34.04■■■■□ 3.04
YIF1A-213ENST00000534374 LAMC1P11047 1609 aa34.04■■■■□ 3.04
YIF1A-213ENST00000534374 SOS2Q07890 1332 aaPredicted RBP34.04■■■■□ 3.04
YIF1A-213ENST00000534374 KDM2AQ9Y2K7 1162 aa34.03■■■■□ 3.04
YIF1A-213ENST00000534374 LRP6O75581 1613 aa34.03■■■■□ 3.04
YIF1A-213ENST00000534374 ESCO1Q5FWF5 840 aa34.01■■■■□ 3.03
YIF1A-213ENST00000534374 NUTM2BA6NNL0 878 aaPredicted RBP33.99■■■■□ 3.03
YIF1A-213ENST00000534374 NUTM2EB1AL46 878 aaPredicted RBP33.99■■■■□ 3.03
YIF1A-213ENST00000534374 NUTM2AQ8IVF1 878 aaPredicted RBP33.99■■■■□ 3.03
YIF1A-213ENST00000534374 ZNF772Q68DY9 489 aaPredicted RBP33.97■■■■□ 3.03
YIF1A-213ENST00000534374 PNPLA6Q8IY17 1366 aa33.97■■■■□ 3.03
YIF1A-213ENST00000534374 NPHP3Q7Z494 1330 aa33.95■■■■□ 3.03
YIF1A-213ENST00000534374 PRAM1Q96QH2 718 aa33.94■■■■□ 3.02
YIF1A-213ENST00000534374 DLC1Q96QB1 1528 aa33.91■■■■□ 3.02
YIF1A-213ENST00000534374 NUTM2FA1L443 756 aa33.91■■■■□ 3.02
YIF1A-213ENST00000534374 POGKQ9P215 609 aa33.91■■■■□ 3.02
YIF1A-213ENST00000534374 FOXO3O43524 673 aa33.9■■■■□ 3.02
YIF1A-213ENST00000534374 ADGRB1O14514 1584 aa33.89■■■■□ 3.02
YIF1A-213ENST00000534374 TRAK1Q9UPV9 953 aa33.87■■■■□ 3.01
YIF1A-213ENST00000534374 SAFB2Q14151 953 aaKnown RBP eCLIP33.85■■■■□ 3.01
YIF1A-213ENST00000534374 FMN2Q9NZ56 1722 aa33.84■■■■□ 3.01
YIF1A-213ENST00000534374 PXDNQ92626 1479 aa33.82■■■■□ 3
YIF1A-213ENST00000534374 AFF2P51816 1311 aa33.8■■■■□ 3
YIF1A-213ENST00000534374 C8orf37Q96NL8 207 aa33.79■■■■□ 3
YIF1A-213ENST00000534374 XPCQ01831 940 aaPredicted RBP33.78■■■■□ 3
YIF1A-213ENST00000534374 PHF8Q9UPP1 1060 aa33.78■■■■□ 3
YIF1A-213ENST00000534374 ADAMTS2O95450 1211 aa33.76■■■□□ 2.99
YIF1A-213ENST00000534374 RXRBP28702 533 aa33.76■■■□□ 2.99
YIF1A-213ENST00000534374 KRT28Q7Z3Y7 464 aa33.75■■■□□ 2.99
YIF1A-213ENST00000534374 NGLY1Q96IV0 654 aa33.75■■■□□ 2.99
YIF1A-213ENST00000534374 KIF1AQ12756 1690 aa33.74■■■□□ 2.99
YIF1A-213ENST00000534374 COL22A1Q8NFW1 1626 aaPredicted RBP33.73■■■□□ 2.99
YIF1A-213ENST00000534374 ANKARQ7Z5J8 1434 aa33.72■■■□□ 2.99
YIF1A-213ENST00000534374 PSME1Q06323 249 aa33.72■■■□□ 2.99
YIF1A-213ENST00000534374 SPATA31A3Q5VYP0 1347 aa33.72■■■□□ 2.99
YIF1A-213ENST00000534374 RGPD8O14715 1765 aaPredicted RBP33.71■■■□□ 2.99
YIF1A-213ENST00000534374 MINK1Q8N4C8 1332 aaPredicted RBP33.71■■■□□ 2.99
YIF1A-213ENST00000534374 ADGRB2O60241 1585 aa33.7■■■□□ 2.99
YIF1A-213ENST00000534374 HIRIP3Q9BW71 556 aaPredicted RBP33.7■■■□□ 2.99
YIF1A-213ENST00000534374 QTRT2Q9H974 415 aaKnown RBP33.7■■■□□ 2.99
YIF1A-213ENST00000534374 WASLO00401 505 aaPredicted RBP33.69■■■□□ 2.98
YIF1A-213ENST00000534374 FNBP4Q8N3X1 1017 aaPredicted RBP33.68■■■□□ 2.98
YIF1A-213ENST00000534374 EIF3AQ14152 1382 aaKnown RBP33.68■■■□□ 2.98
YIF1A-213ENST00000534374 CDK12Q9NYV4 1490 aaPredicted RBP33.66■■■□□ 2.98
YIF1A-213ENST00000534374 KIAA1210Q9ULL0 1709 aa33.65■■■□□ 2.98
YIF1A-213ENST00000534374 RBM6P78332 1123 aaKnown RBP33.64■■■□□ 2.98
YIF1A-213ENST00000534374 PMFBP1Q8TBY8 1022 aa33.63■■■□□ 2.97
YIF1A-213ENST00000534374 SBNO1A3KN83 1393 aa33.62■■■□□ 2.97
YIF1A-213ENST00000534374 NBPF1Q3BBV0 1214 aa33.62■■■□□ 2.97
YIF1A-213ENST00000534374 L3MBTL2Q969R5 705 aa33.62■■■□□ 2.97
YIF1A-213ENST00000534374 USP21Q9UK80 565 aa33.62■■■□□ 2.97
YIF1A-213ENST00000534374 SIN3AQ96ST3 1273 aa33.61■■■□□ 2.97
YIF1A-213ENST00000534374 USP32Q8NFA0 1604 aa33.6■■■□□ 2.97
YIF1A-213ENST00000534374 PRR36Q9H6K5 1346 aa33.59■■■□□ 2.97
YIF1A-213ENST00000534374 ARHGEF28Q8N1W1 1705 aaKnown RBP33.59■■■□□ 2.97
YIF1A-213ENST00000534374 TNS3Q68CZ2 1445 aa33.57■■■□□ 2.96
YIF1A-213ENST00000534374 UPF1Q92900 1129 aaKnown RBP eCLIP33.57■■■□□ 2.96
YIF1A-213ENST00000534374 TRPC5Q9UL62 973 aaPredicted RBP33.57■■■□□ 2.96
YIF1A-213ENST00000534374 TULP4Q9NRJ4 1543 aa33.57■■■□□ 2.96
YIF1A-213ENST00000534374 ARHGEF10O15013 1369 aa33.53■■■□□ 2.96
YIF1A-213ENST00000534374 GPRASP1Q5JY77 1395 aa33.53■■■□□ 2.96
YIF1A-213ENST00000534374 NEUROD1Q13562 356 aa33.53■■■□□ 2.96
YIF1A-213ENST00000534374 NUDT16Q96DE0 195 aaKnown RBP33.53■■■□□ 2.96
YIF1A-213ENST00000534374 CDK19Q9BWU1 502 aa33.53■■■□□ 2.96
YIF1A-213ENST00000534374 LMOD2Q6P5Q4 547 aa33.5■■■□□ 2.95
YIF1A-213ENST00000534374 NGDNQ8NEJ9 315 aaKnown RBP33.5■■■□□ 2.95
YIF1A-213ENST00000534374 MARF1Q9Y4F3 1742 aaKnown RBP33.5■■■□□ 2.95
YIF1A-213ENST00000534374 BCL9LQ86UU0 1499 aa33.49■■■□□ 2.95
YIF1A-213ENST00000534374 TRIM26Q12899 539 aaPredicted RBP33.48■■■□□ 2.95
YIF1A-213ENST00000534374 HAP1P54257 671 aaPredicted RBP33.47■■■□□ 2.95
YIF1A-213ENST00000534374 ATRNO75882 1429 aa33.46■■■□□ 2.95
YIF1A-213ENST00000534374 CABLES1Q8TDN4 633 aa33.46■■■□□ 2.95
YIF1A-213ENST00000534374 CCDC61Q9Y6R9 512 aa33.45■■■□□ 2.95
YIF1A-213ENST00000534374 CENPJQ9HC77 1338 aaPredicted RBP33.44■■■□□ 2.94
YIF1A-213ENST00000534374 ATP7BP35670 1465 aa33.44■■■□□ 2.94
YIF1A-213ENST00000534374 UNC5CLQ8IV45 518 aa33.43■■■□□ 2.94
YIF1A-213ENST00000534374 RGS12O14924 1447 aa33.42■■■□□ 2.94
YIF1A-213ENST00000534374 SLIT2O94813 1529 aa33.41■■■□□ 2.94
YIF1A-213ENST00000534374 PLEKHG3A1L390 1219 aa33.4■■■□□ 2.94
YIF1A-213ENST00000534374 GJD4Q96KN9 370 aaPredicted RBP33.4■■■□□ 2.94
YIF1A-213ENST00000534374 TRPM3Q9HCF6 1732 aaPredicted RBP33.39■■■□□ 2.94
YIF1A-213ENST00000534374 ITSN1Q15811 1721 aa33.38■■■□□ 2.93
YIF1A-213ENST00000534374 PAK3O75914 559 aaPredicted RBP33.36■■■□□ 2.93
YIF1A-213ENST00000534374 PLEKHG5O94827 1062 aa33.36■■■□□ 2.93
YIF1A-213ENST00000534374 POLR3AO14802 1390 aaPredicted RBP33.35■■■□□ 2.93
YIF1A-213ENST00000534374 NBPF8Q3BBV2 869 aa33.35■■■□□ 2.93
YIF1A-213ENST00000534374 ALS2Q96Q42 1657 aa33.34■■■□□ 2.93
YIF1A-213ENST00000534374 SRPK2P78362 688 aaKnown RBP33.34■■■□□ 2.93
YIF1A-213ENST00000534374 ACEP12821 1306 aa33.33■■■□□ 2.93
YIF1A-213ENST00000534374 FAM83GA6ND36 823 aa33.33■■■□□ 2.93
YIF1A-213ENST00000534374 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.33■■■□□ 2.93
YIF1A-213ENST00000534374 ROCK2O75116 1388 aaKnown RBP33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms