RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NUP155O75694 1391 aa17.23■□□□□ 0.35
TRAPPC4-213ENST00000533149 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
TRAPPC4-213ENST00000533149 MARF1Q9Y4F3 1742 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-213ENST00000533149 ESCO1Q5FWF5 840 aa17.21■□□□□ 0.34
TRAPPC4-213ENST00000533149 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
TRAPPC4-213ENST00000533149 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-213ENST00000533149 LRPPRCP42704 1394 aaKnown RBP17.19■□□□□ 0.34
TRAPPC4-213ENST00000533149 ROBO2Q9HCK4 1378 aa17.19■□□□□ 0.34
TRAPPC4-213ENST00000533149 HRCP23327 699 aa17.19■□□□□ 0.34
TRAPPC4-213ENST00000533149 SLIT2O94813 1529 aa17.18■□□□□ 0.34
TRAPPC4-213ENST00000533149 GLI3P10071 1580 aa17.18■□□□□ 0.34
TRAPPC4-213ENST00000533149 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
TRAPPC4-213ENST00000533149 SEPT12Q8IYM1 358 aa17.18■□□□□ 0.34
TRAPPC4-213ENST00000533149 PXDNQ92626 1479 aa17.18■□□□□ 0.34
TRAPPC4-213ENST00000533149 HFM1A2PYH4 1435 aa17.17■□□□□ 0.34
TRAPPC4-213ENST00000533149 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
TRAPPC4-213ENST00000533149 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC4-213ENST00000533149 FOXO3O43524 673 aa17.17■□□□□ 0.34
TRAPPC4-213ENST00000533149 BAG6P46379 1132 aa17.17■□□□□ 0.34
TRAPPC4-213ENST00000533149 NEXMIFQ5QGS0 1516 aa17.16■□□□□ 0.34
TRAPPC4-213ENST00000533149 VGFO15240 615 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC4-213ENST00000533149 XPCQ01831 940 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC4-213ENST00000533149 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
TRAPPC4-213ENST00000533149 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC4-213ENST00000533149 VPS72Q15906 364 aa17.14■□□□□ 0.33
TRAPPC4-213ENST00000533149 BRWD3Q6RI45 1802 aa17.14■□□□□ 0.33
TRAPPC4-213ENST00000533149 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
TRAPPC4-213ENST00000533149 CDC42BPGQ6DT37 1551 aa17.11■□□□□ 0.33
TRAPPC4-213ENST00000533149 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-213ENST00000533149 SPATA31A3Q5VYP0 1347 aa17.09■□□□□ 0.33
TRAPPC4-213ENST00000533149 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC4-213ENST00000533149 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
TRAPPC4-213ENST00000533149 YY1P25490 414 aa17.07■□□□□ 0.32
TRAPPC4-213ENST00000533149 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
TRAPPC4-213ENST00000533149 CLTCL1P53675 1640 aa17.06■□□□□ 0.32
TRAPPC4-213ENST00000533149 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
TRAPPC4-213ENST00000533149 A0A0G2JS52 829 aa17.05■□□□□ 0.32
TRAPPC4-213ENST00000533149 MYT1Q01538 1121 aa17.05■□□□□ 0.32
TRAPPC4-213ENST00000533149 R3HDM1Q15032 1099 aaKnown RBP17.05■□□□□ 0.32
TRAPPC4-213ENST00000533149 KIF1BO60333 1816 aa17.05■□□□□ 0.32
TRAPPC4-213ENST00000533149 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-213ENST00000533149 NAIPQ13075 1403 aa17.04■□□□□ 0.32
TRAPPC4-213ENST00000533149 NUTM2FA1L443 756 aa17.03■□□□□ 0.32
TRAPPC4-213ENST00000533149 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
TRAPPC4-213ENST00000533149 NWD2Q9ULI1 1742 aa17.03■□□□□ 0.32
TRAPPC4-213ENST00000533149 PSME1Q06323 249 aa17.02■□□□□ 0.32
TRAPPC4-213ENST00000533149 KIF1AQ12756 1690 aa17■□□□□ 0.31
TRAPPC4-213ENST00000533149 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-213ENST00000533149 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
TRAPPC4-213ENST00000533149 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
TRAPPC4-213ENST00000533149 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
TRAPPC4-213ENST00000533149 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
TRAPPC4-213ENST00000533149 TNS3Q68CZ2 1445 aa16.99■□□□□ 0.31
TRAPPC4-213ENST00000533149 ITGAEP38570 1179 aa16.98■□□□□ 0.31
TRAPPC4-213ENST00000533149 WAPLQ7Z5K2 1190 aa16.97■□□□□ 0.31
TRAPPC4-213ENST00000533149 FAM83GA6ND36 823 aa16.96■□□□□ 0.31
TRAPPC4-213ENST00000533149 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
TRAPPC4-213ENST00000533149 ARHGEF10O15013 1369 aa16.96■□□□□ 0.31
TRAPPC4-213ENST00000533149 TECPR2O15040 1411 aa16.96■□□□□ 0.31
TRAPPC4-213ENST00000533149 STK26Q9P289 416 aa16.96■□□□□ 0.3
TRAPPC4-213ENST00000533149 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
TRAPPC4-213ENST00000533149 PLEKHG5O94827 1062 aa16.95■□□□□ 0.3
TRAPPC4-213ENST00000533149 EZH2Q15910 746 aaKnown RBP16.95■□□□□ 0.3
TRAPPC4-213ENST00000533149 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
TRAPPC4-213ENST00000533149 PHF8Q9UPP1 1060 aa16.95■□□□□ 0.3
TRAPPC4-213ENST00000533149 ABCC11Q96J66 1382 aa16.94■□□□□ 0.3
TRAPPC4-213ENST00000533149 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
TRAPPC4-213ENST00000533149 PARD3Q8TEW0 1356 aa16.93■□□□□ 0.3
TRAPPC4-213ENST00000533149 BTG4Q9NY30 223 aa16.93■□□□□ 0.3
TRAPPC4-213ENST00000533149 PPLO60437 1756 aa16.92■□□□□ 0.3
TRAPPC4-213ENST00000533149 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
TRAPPC4-213ENST00000533149 CAMKK2Q96RR4 588 aa16.92■□□□□ 0.3
TRAPPC4-213ENST00000533149 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC4-213ENST00000533149 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
TRAPPC4-213ENST00000533149 PLEKHH1Q9ULM0 1364 aa16.9■□□□□ 0.3
TRAPPC4-213ENST00000533149 FAM196AQ6ZSG2 479 aa16.9■□□□□ 0.3
TRAPPC4-213ENST00000533149 NRAPQ86VF7 1730 aa16.89■□□□□ 0.29
TRAPPC4-213ENST00000533149 ABCA3Q99758 1704 aa16.89■□□□□ 0.29
TRAPPC4-213ENST00000533149 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
TRAPPC4-213ENST00000533149 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
TRAPPC4-213ENST00000533149 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC4-213ENST00000533149 TNS1Q9HBL0 1735 aaKnown RBP16.88■□□□□ 0.29
TRAPPC4-213ENST00000533149 NBPF8Q3BBV2 869 aa16.88■□□□□ 0.29
TRAPPC4-213ENST00000533149 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
TRAPPC4-213ENST00000533149 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
TRAPPC4-213ENST00000533149 NRXN1Q9ULB1 1477 aa16.88■□□□□ 0.29
TRAPPC4-213ENST00000533149 ADGRF5Q8IZF2 1346 aa16.87■□□□□ 0.29
TRAPPC4-213ENST00000533149 TRIM37O94972 964 aa16.87■□□□□ 0.29
TRAPPC4-213ENST00000533149 APBA3O96018 575 aa16.87■□□□□ 0.29
TRAPPC4-213ENST00000533149 KNDC1Q76NI1 1749 aa16.86■□□□□ 0.29
TRAPPC4-213ENST00000533149 TMEM132EQ6IEE7 984 aa16.86■□□□□ 0.29
TRAPPC4-213ENST00000533149 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
TRAPPC4-213ENST00000533149 COL14A1Q05707 1796 aaKnown RBP16.86■□□□□ 0.29
TRAPPC4-213ENST00000533149 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
TRAPPC4-213ENST00000533149 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
TRAPPC4-213ENST00000533149 THSD7AQ9UPZ6 1657 aa16.85■□□□□ 0.29
TRAPPC4-213ENST00000533149 ANKRD30BQ9BXX2 1392 aa16.84■□□□□ 0.29
TRAPPC4-213ENST00000533149 YTHDC2Q9H6S0 1430 aaKnown RBP16.83■□□□□ 0.29
TRAPPC4-213ENST00000533149 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
TRAPPC4-213ENST00000533149 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms