RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 MEX3CQ5U5Q3 659 aaKnown RBP14.06□□□□□ -0.16
SYVN1-214ENST00000532771 ORAI2Q96SN7 254 aa14.06□□□□□ -0.16
SYVN1-214ENST00000532771 KNDC1Q76NI1 1749 aa14.06□□□□□ -0.16
SYVN1-214ENST00000532771 YTHDC2Q9H6S0 1430 aaKnown RBP14.06□□□□□ -0.16
SYVN1-214ENST00000532771 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
SYVN1-214ENST00000532771 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
SYVN1-214ENST00000532771 SOS2Q07890 1332 aaPredicted RBP14.04□□□□□ -0.16
SYVN1-214ENST00000532771 PLEKHH1Q9ULM0 1364 aa14.04□□□□□ -0.16
SYVN1-214ENST00000532771 NUTM2BA6NNL0 878 aaPredicted RBP14.03□□□□□ -0.16
SYVN1-214ENST00000532771 NUTM2EB1AL46 878 aaPredicted RBP14.03□□□□□ -0.16
SYVN1-214ENST00000532771 CFAP70Q5T0N1 1121 aa14.03□□□□□ -0.16
SYVN1-214ENST00000532771 NUTM2AQ8IVF1 878 aaPredicted RBP14.03□□□□□ -0.16
SYVN1-214ENST00000532771 SIRT1Q96EB6 747 aa14.03□□□□□ -0.16
SYVN1-214ENST00000532771 ZNF772Q68DY9 489 aaPredicted RBP14.02□□□□□ -0.17
SYVN1-214ENST00000532771 DHX57Q6P158 1386 aaKnown RBP14.01□□□□□ -0.17
SYVN1-214ENST00000532771 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
SYVN1-214ENST00000532771 NPHP3Q7Z494 1330 aa14□□□□□ -0.17
SYVN1-214ENST00000532771 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
SYVN1-214ENST00000532771 ADGRB1O14514 1584 aa13.97□□□□□ -0.17
SYVN1-214ENST00000532771 AFF2P51816 1311 aa13.97□□□□□ -0.17
SYVN1-214ENST00000532771 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
SYVN1-214ENST00000532771 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
SYVN1-214ENST00000532771 FOXO3O43524 673 aa13.97□□□□□ -0.17
SYVN1-214ENST00000532771 DCAF11Q8TEB1 546 aa13.97□□□□□ -0.17
SYVN1-214ENST00000532771 FMN2Q9NZ56 1722 aa13.97□□□□□ -0.17
SYVN1-214ENST00000532771 PXDNQ92626 1479 aa13.97□□□□□ -0.17
SYVN1-214ENST00000532771 C8orf37Q96NL8 207 aa13.96□□□□□ -0.17
SYVN1-214ENST00000532771 PRAM1Q96QH2 718 aa13.96□□□□□ -0.17
SYVN1-214ENST00000532771 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.17
SYVN1-214ENST00000532771 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
SYVN1-214ENST00000532771 ADAMTS2O95450 1211 aa13.94□□□□□ -0.18
SYVN1-214ENST00000532771 RXRBP28702 533 aa13.94□□□□□ -0.18
SYVN1-214ENST00000532771 XPCQ01831 940 aaPredicted RBP13.94□□□□□ -0.18
SYVN1-214ENST00000532771 SAFB2Q14151 953 aaKnown RBP eCLIP13.93□□□□□ -0.18
SYVN1-214ENST00000532771 POGKQ9P215 609 aa13.93□□□□□ -0.18
SYVN1-214ENST00000532771 KIF1AQ12756 1690 aa13.93□□□□□ -0.18
SYVN1-214ENST00000532771 CDK12Q9NYV4 1490 aaPredicted RBP13.93□□□□□ -0.18
SYVN1-214ENST00000532771 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
SYVN1-214ENST00000532771 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
SYVN1-214ENST00000532771 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
SYVN1-214ENST00000532771 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.18
SYVN1-214ENST00000532771 QTRT2Q9H974 415 aaKnown RBP13.9□□□□□ -0.18
SYVN1-214ENST00000532771 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
SYVN1-214ENST00000532771 SPATA31A3Q5VYP0 1347 aa13.9□□□□□ -0.19
SYVN1-214ENST00000532771 RBM6P78332 1123 aaKnown RBP13.89□□□□□ -0.19
SYVN1-214ENST00000532771 KRT28Q7Z3Y7 464 aa13.89□□□□□ -0.19
SYVN1-214ENST00000532771 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
SYVN1-214ENST00000532771 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
SYVN1-214ENST00000532771 USP32Q8NFA0 1604 aa13.87□□□□□ -0.19
SYVN1-214ENST00000532771 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
SYVN1-214ENST00000532771 USP21Q9UK80 565 aa13.87□□□□□ -0.19
SYVN1-214ENST00000532771 MINK1Q8N4C8 1332 aaPredicted RBP13.87□□□□□ -0.19
SYVN1-214ENST00000532771 EIF3AQ14152 1382 aaKnown RBP13.86□□□□□ -0.19
SYVN1-214ENST00000532771 PSME1Q06323 249 aa13.86□□□□□ -0.19
SYVN1-214ENST00000532771 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
SYVN1-214ENST00000532771 RGS12O14924 1447 aa13.86□□□□□ -0.19
SYVN1-214ENST00000532771 TNS3Q68CZ2 1445 aa13.86□□□□□ -0.19
SYVN1-214ENST00000532771 SBNO1A3KN83 1393 aa13.85□□□□□ -0.19
SYVN1-214ENST00000532771 ATRNO75882 1429 aa13.85□□□□□ -0.19
SYVN1-214ENST00000532771 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
SYVN1-214ENST00000532771 PRR36Q9H6K5 1346 aa13.85□□□□□ -0.19
SYVN1-214ENST00000532771 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
SYVN1-214ENST00000532771 ARHGEF28Q8N1W1 1705 aaKnown RBP13.84□□□□□ -0.19
SYVN1-214ENST00000532771 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
SYVN1-214ENST00000532771 PMFBP1Q8TBY8 1022 aa13.84□□□□□ -0.19
SYVN1-214ENST00000532771 UPF1Q92900 1129 aaKnown RBP eCLIP13.84□□□□□ -0.19
SYVN1-214ENST00000532771 BCL9LQ86UU0 1499 aa13.84□□□□□ -0.19
SYVN1-214ENST00000532771 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
SYVN1-214ENST00000532771 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
SYVN1-214ENST00000532771 SLIT2O94813 1529 aa13.8□□□□□ -0.2
SYVN1-214ENST00000532771 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
SYVN1-214ENST00000532771 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
SYVN1-214ENST00000532771 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
SYVN1-214ENST00000532771 ATP7BP35670 1465 aa13.8□□□□□ -0.2
SYVN1-214ENST00000532771 TRPM3Q9HCF6 1732 aaPredicted RBP13.79□□□□□ -0.2
SYVN1-214ENST00000532771 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
SYVN1-214ENST00000532771 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
SYVN1-214ENST00000532771 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
SYVN1-214ENST00000532771 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
SYVN1-214ENST00000532771 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
SYVN1-214ENST00000532771 NUDT16Q96DE0 195 aaKnown RBP13.78□□□□□ -0.2
SYVN1-214ENST00000532771 GJD4Q96KN9 370 aaPredicted RBP13.78□□□□□ -0.2
SYVN1-214ENST00000532771 NGDNQ8NEJ9 315 aaKnown RBP13.77□□□□□ -0.21
SYVN1-214ENST00000532771 ABCA3Q99758 1704 aa13.77□□□□□ -0.21
SYVN1-214ENST00000532771 CDK19Q9BWU1 502 aa13.77□□□□□ -0.21
SYVN1-214ENST00000532771 ITSN1Q15811 1721 aa13.76□□□□□ -0.21
SYVN1-214ENST00000532771 ALS2Q96Q42 1657 aa13.76□□□□□ -0.21
SYVN1-214ENST00000532771 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
SYVN1-214ENST00000532771 SIN3AQ96ST3 1273 aa13.76□□□□□ -0.21
SYVN1-214ENST00000532771 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
SYVN1-214ENST00000532771 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
SYVN1-214ENST00000532771 POLR3AO14802 1390 aaPredicted RBP13.74□□□□□ -0.21
SYVN1-214ENST00000532771 CENPJQ9HC77 1338 aaPredicted RBP13.74□□□□□ -0.21
SYVN1-214ENST00000532771 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
SYVN1-214ENST00000532771 GLI3P10071 1580 aa13.74□□□□□ -0.21
SYVN1-214ENST00000532771 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
SYVN1-214ENST00000532771 PLCH1Q4KWH8 1693 aa13.73□□□□□ -0.21
SYVN1-214ENST00000532771 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
SYVN1-214ENST00000532771 FAM83GA6ND36 823 aa13.73□□□□□ -0.21
SYVN1-214ENST00000532771 VPS72Q15906 364 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms