RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 WAPLQ7Z5K2 1190 aa27.98■■■□□ 2.07
SSH3-209ENST00000532600 ORAI2Q96SN7 254 aa27.98■■■□□ 2.07
SSH3-209ENST00000532600 C14orf93Q9H972 538 aaKnown RBP27.97■■■□□ 2.07
SSH3-209ENST00000532600 YTHDC2Q9H6S0 1430 aaKnown RBP27.96■■■□□ 2.07
SSH3-209ENST00000532600 CFAP70Q5T0N1 1121 aa27.95■■■□□ 2.06
SSH3-209ENST00000532600 PNPLA6Q8IY17 1366 aa27.9■■■□□ 2.06
SSH3-209ENST00000532600 LRRC59Q96AG4 307 aaKnown RBP27.9■■■□□ 2.06
SSH3-209ENST00000532600 SOS2Q07890 1332 aaPredicted RBP27.89■■■□□ 2.05
SSH3-209ENST00000532600 NUTM2BA6NNL0 878 aaPredicted RBP27.87■■■□□ 2.05
SSH3-209ENST00000532600 NUTM2EB1AL46 878 aaPredicted RBP27.87■■■□□ 2.05
SSH3-209ENST00000532600 NUTM2AQ8IVF1 878 aaPredicted RBP27.87■■■□□ 2.05
SSH3-209ENST00000532600 ADGRB1O14514 1584 aa27.86■■■□□ 2.05
SSH3-209ENST00000532600 SIRT1Q96EB6 747 aa27.86■■■□□ 2.05
SSH3-209ENST00000532600 FMN2Q9NZ56 1722 aa27.86■■■□□ 2.05
SSH3-209ENST00000532600 MEX3CQ5U5Q3 659 aaKnown RBP27.85■■■□□ 2.05
SSH3-209ENST00000532600 DHX57Q6P158 1386 aaKnown RBP27.84■■■□□ 2.05
SSH3-209ENST00000532600 NUTM2FA1L443 756 aa27.82■■■□□ 2.04
SSH3-209ENST00000532600 ESCO1Q5FWF5 840 aa27.82■■■□□ 2.04
SSH3-209ENST00000532600 PXDNQ92626 1479 aa27.82■■■□□ 2.04
SSH3-209ENST00000532600 DCAF11Q8TEB1 546 aa27.8■■■□□ 2.04
SSH3-209ENST00000532600 KDM2AQ9Y2K7 1162 aa27.8■■■□□ 2.04
SSH3-209ENST00000532600 DLC1Q96QB1 1528 aa27.79■■■□□ 2.04
SSH3-209ENST00000532600 PRAM1Q96QH2 718 aa27.77■■■□□ 2.04
SSH3-209ENST00000532600 COL22A1Q8NFW1 1626 aaPredicted RBP27.77■■■□□ 2.04
SSH3-209ENST00000532600 ZNF772Q68DY9 489 aaPredicted RBP27.76■■■□□ 2.03
SSH3-209ENST00000532600 RGPD8O14715 1765 aaPredicted RBP27.76■■■□□ 2.03
SSH3-209ENST00000532600 FOXO3O43524 673 aa27.75■■■□□ 2.03
SSH3-209ENST00000532600 AFF2P51816 1311 aa27.74■■■□□ 2.03
SSH3-209ENST00000532600 NPHP3Q7Z494 1330 aa27.74■■■□□ 2.03
SSH3-209ENST00000532600 XPCQ01831 940 aaPredicted RBP27.74■■■□□ 2.03
SSH3-209ENST00000532600 SAFB2Q14151 953 aaKnown RBP eCLIP27.74■■■□□ 2.03
SSH3-209ENST00000532600 KIF1AQ12756 1690 aa27.72■■■□□ 2.03
SSH3-209ENST00000532600 USP32Q8NFA0 1604 aa27.7■■■□□ 2.03
SSH3-209ENST00000532600 ADGRB2O60241 1585 aa27.7■■■□□ 2.03
SSH3-209ENST00000532600 C8orf37Q96NL8 207 aa27.7■■■□□ 2.02
SSH3-209ENST00000532600 TRAK1Q9UPV9 953 aa27.7■■■□□ 2.02
SSH3-209ENST00000532600 ADAMTS2O95450 1211 aa27.69■■■□□ 2.02
SSH3-209ENST00000532600 STAC3Q96MF2 364 aa27.69■■■□□ 2.02
SSH3-209ENST00000532600 POGKQ9P215 609 aa27.66■■■□□ 2.02
SSH3-209ENST00000532600 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.01
SSH3-209ENST00000532600 RXRBP28702 533 aa27.62■■■□□ 2.01
SSH3-209ENST00000532600 HIRIP3Q9BW71 556 aaPredicted RBP27.62■■■□□ 2.01
SSH3-209ENST00000532600 PHF8Q9UPP1 1060 aa27.62■■■□□ 2.01
SSH3-209ENST00000532600 SPATA31A3Q5VYP0 1347 aa27.61■■■□□ 2.01
SSH3-209ENST00000532600 ANKARQ7Z5J8 1434 aa27.6■■■□□ 2.01
SSH3-209ENST00000532600 NGLY1Q96IV0 654 aa27.6■■■□□ 2.01
SSH3-209ENST00000532600 MARF1Q9Y4F3 1742 aaKnown RBP27.6■■■□□ 2.01
SSH3-209ENST00000532600 MINK1Q8N4C8 1332 aaPredicted RBP27.6■■■□□ 2.01
SSH3-209ENST00000532600 CDK12Q9NYV4 1490 aaPredicted RBP27.59■■■□□ 2.01
SSH3-209ENST00000532600 KRT28Q7Z3Y7 464 aa27.59■■■□□ 2.01
SSH3-209ENST00000532600 QTRT2Q9H974 415 aaKnown RBP27.59■■■□□ 2.01
SSH3-209ENST00000532600 PRR36Q9H6K5 1346 aa27.59■■■□□ 2.01
SSH3-209ENST00000532600 KIAA1210Q9ULL0 1709 aa27.58■■■□□ 2.01
SSH3-209ENST00000532600 FNBP4Q8N3X1 1017 aaPredicted RBP27.57■■■□□ 2
SSH3-209ENST00000532600 RGS12O14924 1447 aa27.55■■■□□ 2
SSH3-209ENST00000532600 TULP4Q9NRJ4 1543 aa27.55■■■□□ 2
SSH3-209ENST00000532600 TRIM26Q12899 539 aaPredicted RBP27.54■■■□□ 2
SSH3-209ENST00000532600 TNS3Q68CZ2 1445 aa27.54■■■□□ 2
SSH3-209ENST00000532600 WASLO00401 505 aaPredicted RBP27.53■■■□□ 2
SSH3-209ENST00000532600 NBPF1Q3BBV0 1214 aa27.53■■■□□ 2
SSH3-209ENST00000532600 PMFBP1Q8TBY8 1022 aa27.53■■■□□ 2
SSH3-209ENST00000532600 BCL9LQ86UU0 1499 aa27.52■■■□□ 2
SSH3-209ENST00000532600 RBM6P78332 1123 aaKnown RBP27.52■■■□□ 2
SSH3-209ENST00000532600 USP21Q9UK80 565 aa27.52■■■□□ 2
SSH3-209ENST00000532600 TRPM3Q9HCF6 1732 aaPredicted RBP27.52■■■□□ 2
SSH3-209ENST00000532600 ATRNO75882 1429 aa27.51■■□□□ 1.99
SSH3-209ENST00000532600 SBNO1A3KN83 1393 aa27.51■■□□□ 1.99
SSH3-209ENST00000532600 SIN3AQ96ST3 1273 aa27.5■■□□□ 1.99
SSH3-209ENST00000532600 ABCA3Q99758 1704 aa27.5■■□□□ 1.99
SSH3-209ENST00000532600 PSME1Q06323 249 aa27.48■■□□□ 1.99
SSH3-209ENST00000532600 ATP7BP35670 1465 aa27.47■■□□□ 1.99
SSH3-209ENST00000532600 UPF1Q92900 1129 aaKnown RBP eCLIP27.47■■□□□ 1.99
SSH3-209ENST00000532600 L3MBTL2Q969R5 705 aa27.47■■□□□ 1.99
SSH3-209ENST00000532600 EIF3AQ14152 1382 aaKnown RBP27.47■■□□□ 1.99
SSH3-209ENST00000532600 CABLES1Q8TDN4 633 aa27.46■■□□□ 1.99
SSH3-209ENST00000532600 TRPC5Q9UL62 973 aaPredicted RBP27.45■■□□□ 1.98
SSH3-209ENST00000532600 ALS2Q96Q42 1657 aa27.45■■□□□ 1.98
SSH3-209ENST00000532600 SLIT2O94813 1529 aa27.45■■□□□ 1.98
SSH3-209ENST00000532600 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.43■■□□□ 1.98
SSH3-209ENST00000532600 ARHGEF10O15013 1369 aa27.41■■□□□ 1.98
SSH3-209ENST00000532600 TOPAZ1Q8N9V7 1692 aa27.4■■□□□ 1.98
SSH3-209ENST00000532600 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
SSH3-209ENST00000532600 CDK19Q9BWU1 502 aa27.4■■□□□ 1.98
SSH3-209ENST00000532600 ITSN1Q15811 1721 aa27.4■■□□□ 1.98
SSH3-209ENST00000532600 PLEKHG5O94827 1062 aa27.39■■□□□ 1.98
SSH3-209ENST00000532600 LMOD2Q6P5Q4 547 aa27.39■■□□□ 1.98
SSH3-209ENST00000532600 TRPM1Q7Z4N2 1603 aa27.38■■□□□ 1.97
SSH3-209ENST00000532600 CRYBG1Q9Y4K1 1723 aa27.37■■□□□ 1.97
SSH3-209ENST00000532600 PLCH1Q4KWH8 1693 aa27.36■■□□□ 1.97
SSH3-209ENST00000532600 GPRASP1Q5JY77 1395 aa27.36■■□□□ 1.97
SSH3-209ENST00000532600 GLI3P10071 1580 aa27.36■■□□□ 1.97
SSH3-209ENST00000532600 NEUROD1Q13562 356 aa27.36■■□□□ 1.97
SSH3-209ENST00000532600 UNC5CLQ8IV45 518 aa27.36■■□□□ 1.97
SSH3-209ENST00000532600 NGDNQ8NEJ9 315 aaKnown RBP27.34■■□□□ 1.97
SSH3-209ENST00000532600 GJD4Q96KN9 370 aaPredicted RBP27.33■■□□□ 1.97
SSH3-209ENST00000532600 QRICH2Q9H0J4 1663 aa27.33■■□□□ 1.97
SSH3-209ENST00000532600 RALGAPBQ86X10 1494 aa27.32■■□□□ 1.96
SSH3-209ENST00000532600 CENPJQ9HC77 1338 aaPredicted RBP27.32■■□□□ 1.96
SSH3-209ENST00000532600 NWD2Q9ULI1 1742 aa27.32■■□□□ 1.96
SSH3-209ENST00000532600 FAM83GA6ND36 823 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms