RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 C14orf93Q9H972 538 aaKnown RBP19.31■□□□□ 0.68
SF3B2-212ENST00000531589 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
SF3B2-212ENST00000531589 SIRT1Q96EB6 747 aa19.29■□□□□ 0.68
SF3B2-212ENST00000531589 MYOM2P54296 1465 aa19.28■□□□□ 0.68
SF3B2-212ENST00000531589 YTHDC2Q9H6S0 1430 aaKnown RBP19.28■□□□□ 0.68
SF3B2-212ENST00000531589 ESCO1Q5FWF5 840 aa19.28■□□□□ 0.68
SF3B2-212ENST00000531589 WAPLQ7Z5K2 1190 aa19.28■□□□□ 0.68
SF3B2-212ENST00000531589 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
SF3B2-212ENST00000531589 CDC42BPGQ6DT37 1551 aa19.27■□□□□ 0.68
SF3B2-212ENST00000531589 SOS2Q07890 1332 aaPredicted RBP19.27■□□□□ 0.68
SF3B2-212ENST00000531589 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
SF3B2-212ENST00000531589 NPHP3Q7Z494 1330 aa19.26■□□□□ 0.67
SF3B2-212ENST00000531589 STAC3Q96MF2 364 aa19.26■□□□□ 0.67
SF3B2-212ENST00000531589 NRXN1Q9ULB1 1477 aa19.26■□□□□ 0.67
SF3B2-212ENST00000531589 LAMC1P11047 1609 aa19.25■□□□□ 0.67
SF3B2-212ENST00000531589 CFAP70Q5T0N1 1121 aa19.25■□□□□ 0.67
SF3B2-212ENST00000531589 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
SF3B2-212ENST00000531589 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
SF3B2-212ENST00000531589 AFF2P51816 1311 aa19.22■□□□□ 0.67
SF3B2-212ENST00000531589 RXRBP28702 533 aa19.21■□□□□ 0.67
SF3B2-212ENST00000531589 C8orf37Q96NL8 207 aa19.21■□□□□ 0.67
SF3B2-212ENST00000531589 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
SF3B2-212ENST00000531589 FOXO3O43524 673 aa19.2■□□□□ 0.66
SF3B2-212ENST00000531589 DCAF11Q8TEB1 546 aa19.2■□□□□ 0.66
SF3B2-212ENST00000531589 NGLY1Q96IV0 654 aa19.19■□□□□ 0.66
SF3B2-212ENST00000531589 POGKQ9P215 609 aa19.19■□□□□ 0.66
SF3B2-212ENST00000531589 ADAMTS2O95450 1211 aa19.18■□□□□ 0.66
SF3B2-212ENST00000531589 KDM2AQ9Y2K7 1162 aa19.18■□□□□ 0.66
SF3B2-212ENST00000531589 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
SF3B2-212ENST00000531589 QTRT2Q9H974 415 aaKnown RBP19.15■□□□□ 0.66
SF3B2-212ENST00000531589 PXDNQ92626 1479 aa19.15■□□□□ 0.66
SF3B2-212ENST00000531589 DLC1Q96QB1 1528 aa19.15■□□□□ 0.66
SF3B2-212ENST00000531589 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.65
SF3B2-212ENST00000531589 RBM6P78332 1123 aaKnown RBP19.13■□□□□ 0.65
SF3B2-212ENST00000531589 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
SF3B2-212ENST00000531589 SAFB2Q14151 953 aaKnown RBP eCLIP19.13■□□□□ 0.65
SF3B2-212ENST00000531589 CDK12Q9NYV4 1490 aaPredicted RBP19.13■□□□□ 0.65
SF3B2-212ENST00000531589 PSME1Q06323 249 aa19.12■□□□□ 0.65
SF3B2-212ENST00000531589 PHF8Q9UPP1 1060 aa19.12■□□□□ 0.65
SF3B2-212ENST00000531589 TRAK1Q9UPV9 953 aa19.12■□□□□ 0.65
SF3B2-212ENST00000531589 KIF1AQ12756 1690 aa19.11■□□□□ 0.65
SF3B2-212ENST00000531589 COL22A1Q8NFW1 1626 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-212ENST00000531589 KRT28Q7Z3Y7 464 aa19.11■□□□□ 0.65
SF3B2-212ENST00000531589 USP21Q9UK80 565 aa19.11■□□□□ 0.65
SF3B2-212ENST00000531589 ADGRB1O14514 1584 aa19.1■□□□□ 0.65
SF3B2-212ENST00000531589 FNBP4Q8N3X1 1017 aaPredicted RBP19.1■□□□□ 0.65
SF3B2-212ENST00000531589 EIF3AQ14152 1382 aaKnown RBP19.09■□□□□ 0.65
SF3B2-212ENST00000531589 SPATA31A3Q5VYP0 1347 aa19.09■□□□□ 0.65
SF3B2-212ENST00000531589 TRPC5Q9UL62 973 aaPredicted RBP19.08■□□□□ 0.64
SF3B2-212ENST00000531589 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.64
SF3B2-212ENST00000531589 ADGRB2O60241 1585 aa19.05■□□□□ 0.64
SF3B2-212ENST00000531589 MINK1Q8N4C8 1332 aaPredicted RBP19.04■□□□□ 0.64
SF3B2-212ENST00000531589 HAP1P54257 671 aaPredicted RBP19.04■□□□□ 0.64
SF3B2-212ENST00000531589 UPF1Q92900 1129 aaKnown RBP eCLIP19.04■□□□□ 0.64
SF3B2-212ENST00000531589 HIRIP3Q9BW71 556 aaPredicted RBP19.04■□□□□ 0.64
SF3B2-212ENST00000531589 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
SF3B2-212ENST00000531589 SBNO1A3KN83 1393 aa19.03■□□□□ 0.64
SF3B2-212ENST00000531589 TNS3Q68CZ2 1445 aa19.02■□□□□ 0.64
SF3B2-212ENST00000531589 PMFBP1Q8TBY8 1022 aa19.02■□□□□ 0.64
SF3B2-212ENST00000531589 ARHGEF10O15013 1369 aa19.02■□□□□ 0.64
SF3B2-212ENST00000531589 LMOD2Q6P5Q4 547 aa19.01■□□□□ 0.63
SF3B2-212ENST00000531589 RGS12O14924 1447 aa19■□□□□ 0.63
SF3B2-212ENST00000531589 GPRASP1Q5JY77 1395 aa19■□□□□ 0.63
SF3B2-212ENST00000531589 RGPD8O14715 1765 aaPredicted RBP18.99■□□□□ 0.63
SF3B2-212ENST00000531589 TULP4Q9NRJ4 1543 aa18.99■□□□□ 0.63
SF3B2-212ENST00000531589 ATRNO75882 1429 aa18.99■□□□□ 0.63
SF3B2-212ENST00000531589 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
SF3B2-212ENST00000531589 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
SF3B2-212ENST00000531589 MARF1Q9Y4F3 1742 aaKnown RBP18.97■□□□□ 0.63
SF3B2-212ENST00000531589 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
SF3B2-212ENST00000531589 UNC5CLQ8IV45 518 aa18.96■□□□□ 0.63
SF3B2-212ENST00000531589 GJD4Q96KN9 370 aaPredicted RBP18.96■□□□□ 0.63
SF3B2-212ENST00000531589 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
SF3B2-212ENST00000531589 KIAA1210Q9ULL0 1709 aa18.95■□□□□ 0.62
SF3B2-212ENST00000531589 CABLES1Q8TDN4 633 aa18.95■□□□□ 0.62
SF3B2-212ENST00000531589 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
SF3B2-212ENST00000531589 SLIT2O94813 1529 aa18.94■□□□□ 0.62
SF3B2-212ENST00000531589 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
SF3B2-212ENST00000531589 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
SF3B2-212ENST00000531589 CDK19Q9BWU1 502 aa18.93■□□□□ 0.62
SF3B2-212ENST00000531589 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
SF3B2-212ENST00000531589 NBPF1Q3BBV0 1214 aa18.92■□□□□ 0.62
SF3B2-212ENST00000531589 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
SF3B2-212ENST00000531589 L3MBTL2Q969R5 705 aa18.9■□□□□ 0.62
SF3B2-212ENST00000531589 CCDC61Q9Y6R9 512 aa18.9■□□□□ 0.62
SF3B2-212ENST00000531589 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.89■□□□□ 0.61
SF3B2-212ENST00000531589 ATP7BP35670 1465 aa18.89■□□□□ 0.61
SF3B2-212ENST00000531589 VPS72Q15906 364 aa18.88■□□□□ 0.61
SF3B2-212ENST00000531589 CENPJQ9HC77 1338 aaPredicted RBP18.88■□□□□ 0.61
SF3B2-212ENST00000531589 ITSN1Q15811 1721 aa18.88■□□□□ 0.61
SF3B2-212ENST00000531589 SIN3AQ96ST3 1273 aa18.87■□□□□ 0.61
SF3B2-212ENST00000531589 TRPM3Q9HCF6 1732 aaPredicted RBP18.86■□□□□ 0.61
SF3B2-212ENST00000531589 RALGAPBQ86X10 1494 aa18.86■□□□□ 0.61
SF3B2-212ENST00000531589 NEUROD1Q13562 356 aa18.86■□□□□ 0.61
SF3B2-212ENST00000531589 CCDC125Q86Z20 511 aa18.86■□□□□ 0.61
SF3B2-212ENST00000531589 CCDC9Q9Y3X0 531 aaKnown RBP18.86■□□□□ 0.61
SF3B2-212ENST00000531589 PLEKHG3A1L390 1219 aa18.85■□□□□ 0.61
SF3B2-212ENST00000531589 FAM83GA6ND36 823 aa18.85■□□□□ 0.61
SF3B2-212ENST00000531589 SRPK2P78362 688 aaKnown RBP18.85■□□□□ 0.61
SF3B2-212ENST00000531589 POLR3AO14802 1390 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms