RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 COL22A1Q8NFW1 1626 aaPredicted RBP27.59■■■□□ 2.01
SSSCA1-206ENST00000531405 KNDC1Q76NI1 1749 aa27.59■■■□□ 2.01
SSSCA1-206ENST00000531405 RGS12O14924 1447 aa27.58■■■□□ 2.01
SSSCA1-206ENST00000531405 QTRT2Q9H974 415 aaKnown RBP27.58■■■□□ 2.01
SSSCA1-206ENST00000531405 MARF1Q9Y4F3 1742 aaKnown RBP27.56■■■□□ 2
SSSCA1-206ENST00000531405 NGLY1Q96IV0 654 aa27.56■■■□□ 2
SSSCA1-206ENST00000531405 MPHOSPH9Q99550 1183 aa27.56■■■□□ 2
SSSCA1-206ENST00000531405 STK26Q9P289 416 aa27.56■■■□□ 2
SSSCA1-206ENST00000531405 TECPR2O15040 1411 aa27.53■■■□□ 2
SSSCA1-206ENST00000531405 RBM6P78332 1123 aaKnown RBP27.53■■■□□ 2
SSSCA1-206ENST00000531405 ESCO1Q5FWF5 840 aa27.53■■■□□ 2
SSSCA1-206ENST00000531405 WAPLQ7Z5K2 1190 aa27.53■■■□□ 2
SSSCA1-206ENST00000531405 PXDNQ92626 1479 aa27.52■■■□□ 2
SSSCA1-206ENST00000531405 ANKRD30BQ9BXX2 1392 aa27.52■■■□□ 2
SSSCA1-206ENST00000531405 FMN2Q9NZ56 1722 aa27.52■■■□□ 2
SSSCA1-206ENST00000531405 RGPD8O14715 1765 aaPredicted RBP27.51■■□□□ 1.99
SSSCA1-206ENST00000531405 TMEM132EQ6IEE7 984 aa27.51■■□□□ 1.99
SSSCA1-206ENST00000531405 PIK3C2GO75747 1445 aa27.5■■□□□ 1.99
SSSCA1-206ENST00000531405 LRPPRCP42704 1394 aaKnown RBP27.5■■□□□ 1.99
SSSCA1-206ENST00000531405 NUTM2FA1L443 756 aa27.5■■□□□ 1.99
SSSCA1-206ENST00000531405 PLEKHH1Q9ULM0 1364 aa27.49■■□□□ 1.99
SSSCA1-206ENST00000531405 XPCQ01831 940 aaPredicted RBP27.49■■□□□ 1.99
SSSCA1-206ENST00000531405 NPHP3Q7Z494 1330 aa27.48■■□□□ 1.99
SSSCA1-206ENST00000531405 MYOM2P54296 1465 aa27.47■■□□□ 1.99
SSSCA1-206ENST00000531405 USP21Q9UK80 565 aa27.47■■□□□ 1.99
SSSCA1-206ENST00000531405 FOXO3O43524 673 aa27.46■■□□□ 1.99
SSSCA1-206ENST00000531405 ABCC11Q96J66 1382 aa27.46■■□□□ 1.99
SSSCA1-206ENST00000531405 YTHDC2Q9H6S0 1430 aaKnown RBP27.44■■□□□ 1.98
SSSCA1-206ENST00000531405 KIF1AQ12756 1690 aa27.43■■□□□ 1.98
SSSCA1-206ENST00000531405 EP400Q96L91 3159 aa27.43■■□□□ 1.98
SSSCA1-206ENST00000531405 FNBP4Q8N3X1 1017 aaPredicted RBP27.42■■□□□ 1.98
SSSCA1-206ENST00000531405 ATRNO75882 1429 aa27.41■■□□□ 1.98
SSSCA1-206ENST00000531405 TRPC5Q9UL62 973 aaPredicted RBP27.4■■□□□ 1.98
SSSCA1-206ENST00000531405 NRXN1Q9ULB1 1477 aa27.38■■□□□ 1.97
SSSCA1-206ENST00000531405 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.36■■□□□ 1.97
SSSCA1-206ENST00000531405 BCL9LQ86UU0 1499 aa27.36■■□□□ 1.97
SSSCA1-206ENST00000531405 CFAP70Q5T0N1 1121 aa27.34■■□□□ 1.97
SSSCA1-206ENST00000531405 C14orf93Q9H972 538 aaKnown RBP27.34■■□□□ 1.97
SSSCA1-206ENST00000531405 ATAD2Q6PL18 1390 aa27.34■■□□□ 1.97
SSSCA1-206ENST00000531405 USP32Q8NFA0 1604 aa27.31■■□□□ 1.96
SSSCA1-206ENST00000531405 SPATA31A3Q5VYP0 1347 aa27.31■■□□□ 1.96
SSSCA1-206ENST00000531405 DHX57Q6P158 1386 aaKnown RBP27.3■■□□□ 1.96
SSSCA1-206ENST00000531405 RAB3GAP2Q9H2M9 1393 aa27.3■■□□□ 1.96
SSSCA1-206ENST00000531405 ABCA3Q99758 1704 aa27.3■■□□□ 1.96
SSSCA1-206ENST00000531405 SAFB2Q14151 953 aaKnown RBP eCLIP27.29■■□□□ 1.96
SSSCA1-206ENST00000531405 SIRT1Q96EB6 747 aa27.29■■□□□ 1.96
SSSCA1-206ENST00000531405 KRT28Q7Z3Y7 464 aa27.28■■□□□ 1.96
SSSCA1-206ENST00000531405 SRCAPQ6ZRS2 3230 aa27.28■■□□□ 1.96
SSSCA1-206ENST00000531405 ACIN1Q9UKV3 1341 aaKnown RBP27.27■■□□□ 1.96
SSSCA1-206ENST00000531405 BRWD3Q6RI45 1802 aa27.27■■□□□ 1.96
SSSCA1-206ENST00000531405 PRAM1Q96QH2 718 aa27.26■■□□□ 1.95
SSSCA1-206ENST00000531405 PLCH1Q4KWH8 1693 aa27.26■■□□□ 1.95
SSSCA1-206ENST00000531405 GLI3P10071 1580 aa27.26■■□□□ 1.95
SSSCA1-206ENST00000531405 PHF8Q9UPP1 1060 aa27.25■■□□□ 1.95
SSSCA1-206ENST00000531405 TNS3Q68CZ2 1445 aa27.24■■□□□ 1.95
SSSCA1-206ENST00000531405 GJD4Q96KN9 370 aaPredicted RBP27.24■■□□□ 1.95
SSSCA1-206ENST00000531405 SLIT2O94813 1529 aa27.24■■□□□ 1.95
SSSCA1-206ENST00000531405 DLC1Q96QB1 1528 aa27.24■■□□□ 1.95
SSSCA1-206ENST00000531405 PLEKHG5O94827 1062 aa27.23■■□□□ 1.95
SSSCA1-206ENST00000531405 ADGRB1O14514 1584 aa27.22■■□□□ 1.95
SSSCA1-206ENST00000531405 ADGRB2O60241 1585 aa27.22■■□□□ 1.95
SSSCA1-206ENST00000531405 RALGAPBQ86X10 1494 aa27.21■■□□□ 1.95
SSSCA1-206ENST00000531405 UNC5CLQ8IV45 518 aa27.2■■□□□ 1.94
SSSCA1-206ENST00000531405 CABLES1Q8TDN4 633 aa27.2■■□□□ 1.94
SSSCA1-206ENST00000531405 NWD2Q9ULI1 1742 aa27.2■■□□□ 1.94
SSSCA1-206ENST00000531405 POGKQ9P215 609 aa27.19■■□□□ 1.94
SSSCA1-206ENST00000531405 TRPM3Q9HCF6 1732 aaPredicted RBP27.19■■□□□ 1.94
SSSCA1-206ENST00000531405 PSME1Q06323 249 aa27.18■■□□□ 1.94
SSSCA1-206ENST00000531405 HAP1P54257 671 aaPredicted RBP27.17■■□□□ 1.94
SSSCA1-206ENST00000531405 LMOD2Q6P5Q4 547 aa27.16■■□□□ 1.94
SSSCA1-206ENST00000531405 PMFBP1Q8TBY8 1022 aa27.16■■□□□ 1.94
SSSCA1-206ENST00000531405 SBNO1A3KN83 1393 aa27.15■■□□□ 1.94
SSSCA1-206ENST00000531405 TRAK1Q9UPV9 953 aa27.15■■□□□ 1.94
SSSCA1-206ENST00000531405 ANKARQ7Z5J8 1434 aa27.15■■□□□ 1.94
SSSCA1-206ENST00000531405 HIRIP3Q9BW71 556 aaPredicted RBP27.14■■□□□ 1.94
SSSCA1-206ENST00000531405 KDM2AQ9Y2K7 1162 aa27.14■■□□□ 1.94
SSSCA1-206ENST00000531405 ALS2Q96Q42 1657 aa27.13■■□□□ 1.93
SSSCA1-206ENST00000531405 ARHGEF28Q8N1W1 1705 aaKnown RBP27.12■■□□□ 1.93
SSSCA1-206ENST00000531405 ARHGEF10O15013 1369 aa27.11■■□□□ 1.93
SSSCA1-206ENST00000531405 DCAF11Q8TEB1 546 aa27.11■■□□□ 1.93
SSSCA1-206ENST00000531405 MINK1Q8N4C8 1332 aaPredicted RBP27.11■■□□□ 1.93
SSSCA1-206ENST00000531405 NRAPQ86VF7 1730 aa27.1■■□□□ 1.93
SSSCA1-206ENST00000531405 TULP4Q9NRJ4 1543 aa27.08■■□□□ 1.93
SSSCA1-206ENST00000531405 PRR36Q9H6K5 1346 aa27.08■■□□□ 1.93
SSSCA1-206ENST00000531405 CRYBG1Q9Y4K1 1723 aa27.07■■□□□ 1.92
SSSCA1-206ENST00000531405 CCDC125Q86Z20 511 aa27.07■■□□□ 1.92
SSSCA1-206ENST00000531405 VPS72Q15906 364 aa27.06■■□□□ 1.92
SSSCA1-206ENST00000531405 ITSN1Q15811 1721 aa27.06■■□□□ 1.92
SSSCA1-206ENST00000531405 CCDC9Q9Y3X0 531 aaKnown RBP27.05■■□□□ 1.92
SSSCA1-206ENST00000531405 FAM83GA6ND36 823 aa27.04■■□□□ 1.92
SSSCA1-206ENST00000531405 SEPT12Q8IYM1 358 aa27.04■■□□□ 1.92
SSSCA1-206ENST00000531405 ZRANB1Q9UGI0 708 aa27.04■■□□□ 1.92
SSSCA1-206ENST00000531405 COL14A1Q05707 1796 aaKnown RBP27.04■■□□□ 1.92
SSSCA1-206ENST00000531405 BLMP54132 1417 aaPredicted RBP27.02■■□□□ 1.92
SSSCA1-206ENST00000531405 EIF3AQ14152 1382 aaKnown RBP27.02■■□□□ 1.92
SSSCA1-206ENST00000531405 GPRASP1Q5JY77 1395 aa27.01■■□□□ 1.91
SSSCA1-206ENST00000531405 WASLO00401 505 aaPredicted RBP27.01■■□□□ 1.91
SSSCA1-206ENST00000531405 ATP7BP35670 1465 aa26.96■■□□□ 1.91
SSSCA1-206ENST00000531405 ONECUT3O60422 494 aaPredicted RBP26.96■■□□□ 1.91
SSSCA1-206ENST00000531405 DEFB132Q7Z7B7 95 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms