RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 RCAN3Q9UKA8 241 aa25.02■■□□□ 1.6
LTBP3-217ENST00000530785 C14orf93Q9H972 538 aaKnown RBP25.01■■□□□ 1.59
LTBP3-217ENST00000530785 ADAMTS8Q9UP79 889 aa25.01■■□□□ 1.59
LTBP3-217ENST00000530785 RPGRIP1LQ68CZ1 1315 aa25■■□□□ 1.59
LTBP3-217ENST00000530785 CENPJQ9HC77 1338 aaPredicted RBP25■■□□□ 1.59
LTBP3-217ENST00000530785 CDCA7LQ96GN5 454 aa25■■□□□ 1.59
LTBP3-217ENST00000530785 QRICH2Q9H0J4 1663 aa24.99■■□□□ 1.59
LTBP3-217ENST00000530785 TRAK1Q9UPV9 953 aa24.98■■□□□ 1.59
LTBP3-217ENST00000530785 ARHGAP31Q2M1Z3 1444 aa24.98■■□□□ 1.59
LTBP3-217ENST00000530785 NEXMIFQ5QGS0 1516 aa24.97■■□□□ 1.59
LTBP3-217ENST00000530785 WDR43Q15061 677 aaKnown RBP eCLIP24.95■■□□□ 1.58
LTBP3-217ENST00000530785 TMEM132EQ6IEE7 984 aa24.95■■□□□ 1.58
LTBP3-217ENST00000530785 CARD14Q9BXL6 1004 aa24.95■■□□□ 1.58
LTBP3-217ENST00000530785 NUTM2DQ5VT03 806 aaPredicted RBP24.91■■□□□ 1.58
LTBP3-217ENST00000530785 PREX1Q8TCU6 1659 aa24.89■■□□□ 1.57
LTBP3-217ENST00000530785 ARHGEF28Q8N1W1 1705 aaKnown RBP24.88■■□□□ 1.57
LTBP3-217ENST00000530785 PLEKHH1Q9ULM0 1364 aa24.88■■□□□ 1.57
LTBP3-217ENST00000530785 IDI1Q13907 227 aa24.88■■□□□ 1.57
LTBP3-217ENST00000530785 VGFO15240 615 aaPredicted RBP24.88■■□□□ 1.57
LTBP3-217ENST00000530785 SLC4A3P48751 1232 aa24.87■■□□□ 1.57
LTBP3-217ENST00000530785 MYO5BQ9ULV0 1848 aa24.87■■□□□ 1.57
LTBP3-217ENST00000530785 NSD3Q9BZ95 1437 aa24.84■■□□□ 1.57
LTBP3-217ENST00000530785 SLC52A1Q9NWF4 448 aa24.84■■□□□ 1.57
LTBP3-217ENST00000530785 ARHGEF40Q8TER5 1519 aa24.83■■□□□ 1.57
LTBP3-217ENST00000530785 TMEM131LA2VDJ0 1609 aa24.83■■□□□ 1.56
LTBP3-217ENST00000530785 SKAP1Q86WV1 359 aa24.82■■□□□ 1.56
LTBP3-217ENST00000530785 SLC12A5Q9H2X9 1139 aa24.82■■□□□ 1.56
LTBP3-217ENST00000530785 ZNF521Q96K83 1311 aa24.82■■□□□ 1.56
LTBP3-217ENST00000530785 FRAT2O75474 233 aaPredicted RBP24.81■■□□□ 1.56
LTBP3-217ENST00000530785 MLECQ14165 292 aa24.81■■□□□ 1.56
LTBP3-217ENST00000530785 PKNOX2Q96KN3 472 aa24.81■■□□□ 1.56
LTBP3-217ENST00000530785 TULP4Q9NRJ4 1543 aa24.81■■□□□ 1.56
LTBP3-217ENST00000530785 ZFYVE9O95405 1425 aa24.81■■□□□ 1.56
LTBP3-217ENST00000530785 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
LTBP3-217ENST00000530785 CRBNQ96SW2 442 aa24.78■■□□□ 1.56
LTBP3-217ENST00000530785 USP32Q8NFA0 1604 aa24.78■■□□□ 1.56
LTBP3-217ENST00000530785 KDM2BQ8NHM5 1336 aa24.78■■□□□ 1.56
LTBP3-217ENST00000530785 REREQ9P2R6 1566 aa24.78■■□□□ 1.56
LTBP3-217ENST00000530785 PLIN1O60240 522 aa24.76■■□□□ 1.55
LTBP3-217ENST00000530785 DUSP27Q5VZP5 1158 aa24.76■■□□□ 1.55
LTBP3-217ENST00000530785 EVC2Q86UK5 1308 aa24.75■■□□□ 1.55
LTBP3-217ENST00000530785 POLR3AO14802 1390 aaPredicted RBP24.74■■□□□ 1.55
LTBP3-217ENST00000530785 GOLGA2Q08379 1002 aa24.74■■□□□ 1.55
LTBP3-217ENST00000530785 FBXO31Q5XUX0 539 aaPredicted RBP24.74■■□□□ 1.55
LTBP3-217ENST00000530785 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
LTBP3-217ENST00000530785 AGLP35573 1532 aa24.74■■□□□ 1.55
LTBP3-217ENST00000530785 FAM161AQ3B820 660 aa24.74■■□□□ 1.55
LTBP3-217ENST00000530785 C8orf34Q49A92 452 aa24.73■■□□□ 1.55
LTBP3-217ENST00000530785 MORC1Q86VD1 984 aa24.73■■□□□ 1.55
LTBP3-217ENST00000530785 APAF1O14727 1248 aa24.72■■□□□ 1.55
LTBP3-217ENST00000530785 PUS7Q96PZ0 661 aaKnown RBP24.72■■□□□ 1.55
LTBP3-217ENST00000530785 SHPRHQ149N8 1683 aa24.72■■□□□ 1.55
LTBP3-217ENST00000530785 SAFB2Q14151 953 aaKnown RBP eCLIP24.7■■□□□ 1.54
LTBP3-217ENST00000530785 ANKRD36BQ8N2N9 1353 aa24.69■■□□□ 1.54
LTBP3-217ENST00000530785 TNNT2P45379 298 aaPredicted RBP24.69■■□□□ 1.54
LTBP3-217ENST00000530785 STK26Q9P289 416 aa24.69■■□□□ 1.54
LTBP3-217ENST00000530785 CENPQQ7L2Z9 268 aaPredicted RBP24.69■■□□□ 1.54
LTBP3-217ENST00000530785 PTPRMP28827 1452 aa24.68■■□□□ 1.54
LTBP3-217ENST00000530785 CGNL1Q0VF96 1302 aa24.68■■□□□ 1.54
LTBP3-217ENST00000530785 SLFN5Q08AF3 891 aa24.68■■□□□ 1.54
LTBP3-217ENST00000530785 GLIPR1L2Q4G1C9 344 aa24.68■■□□□ 1.54
LTBP3-217ENST00000530785 CABP2Q9NPB3 220 aa24.68■■□□□ 1.54
LTBP3-217ENST00000530785 CLTCQ00610 1675 aaKnown RBP24.68■■□□□ 1.54
LTBP3-217ENST00000530785 PLEKHG5O94827 1062 aa24.68■■□□□ 1.54
LTBP3-217ENST00000530785 RRAGDQ9NQL2 400 aaPredicted RBP24.68■■□□□ 1.54
LTBP3-217ENST00000530785 TRMT2AQ8IZ69 625 aaKnown RBP24.64■■□□□ 1.54
LTBP3-217ENST00000530785 SPINK5Q9NQ38 1064 aaPredicted RBP24.64■■□□□ 1.54
LTBP3-217ENST00000530785 YTHDC2Q9H6S0 1430 aaKnown RBP24.64■■□□□ 1.54
LTBP3-217ENST00000530785 C20orf194Q5TEA3 1177 aa24.63■■□□□ 1.53
LTBP3-217ENST00000530785 ALKQ9UM73 1620 aa24.63■■□□□ 1.53
LTBP3-217ENST00000530785 NSD2O96028 1365 aa24.61■■□□□ 1.53
LTBP3-217ENST00000530785 SPATA31D1Q6ZQQ2 1576 aa24.6■■□□□ 1.53
LTBP3-217ENST00000530785 STAG3Q9UJ98 1225 aa24.6■■□□□ 1.53
LTBP3-217ENST00000530785 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
LTBP3-217ENST00000530785 NKTRP30414 1462 aaKnown RBP24.6■■□□□ 1.53
LTBP3-217ENST00000530785 A0A1W2PP64 1363 aa24.6■■□□□ 1.53
LTBP3-217ENST00000530785 SRPK2P78362 688 aaKnown RBP24.6■■□□□ 1.53
LTBP3-217ENST00000530785 NGEFQ8N5V2 710 aa24.6■■□□□ 1.53
LTBP3-217ENST00000530785 PRAM1Q96QH2 718 aa24.6■■□□□ 1.53
LTBP3-217ENST00000530785 DMRT2Q9Y5R5 561 aa24.59■■□□□ 1.53
LTBP3-217ENST00000530785 NINLQ9Y2I6 1382 aa24.59■■□□□ 1.53
LTBP3-217ENST00000530785 MTHFSP49914 203 aa24.59■■□□□ 1.53
LTBP3-217ENST00000530785 POGKQ9P215 609 aa24.59■■□□□ 1.53
LTBP3-217ENST00000530785 L1TD1Q5T7N2 865 aaKnown RBP24.58■■□□□ 1.53
LTBP3-217ENST00000530785 MINK1Q8N4C8 1332 aaPredicted RBP24.58■■□□□ 1.53
LTBP3-217ENST00000530785 E9PSI1 815 aa24.57■■□□□ 1.52
LTBP3-217ENST00000530785 A2ML1A8K2U0 1454 aa24.57■■□□□ 1.52
LTBP3-217ENST00000530785 IQSEC2Q5JU85 1478 aa24.56■■□□□ 1.52
LTBP3-217ENST00000530785 ABCC11Q96J66 1382 aa24.56■■□□□ 1.52
LTBP3-217ENST00000530785 ESF1Q9H501 851 aaKnown RBP24.56■■□□□ 1.52
LTBP3-217ENST00000530785 PODXL2Q9NZ53 605 aa24.56■■□□□ 1.52
LTBP3-217ENST00000530785 ATAD2Q6PL18 1390 aa24.55■■□□□ 1.52
LTBP3-217ENST00000530785 WWC1Q8IX03 1113 aa24.54■■□□□ 1.52
LTBP3-217ENST00000530785 RUNDC1Q96C34 613 aa24.53■■□□□ 1.52
LTBP3-217ENST00000530785 CFAP53Q96M91 514 aa24.53■■□□□ 1.52
LTBP3-217ENST00000530785 VIRMAQ69YN4 1812 aaKnown RBP24.53■■□□□ 1.52
LTBP3-217ENST00000530785 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.53■■□□□ 1.52
LTBP3-217ENST00000530785 CD163L1Q9NR16 1453 aa24.52■■□□□ 1.52
LTBP3-217ENST00000530785 ZMYM3Q14202 1370 aa24.51■■□□□ 1.51
LTBP3-217ENST00000530785 SETD1AO15047 1707 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms