RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
CLINT1-210ENST00000530742 KNDC1Q76NI1 1749 aa16.57■□□□□ 0.24
CLINT1-210ENST00000530742 EXOC6Q8TAG9 804 aa16.57■□□□□ 0.24
CLINT1-210ENST00000530742 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
CLINT1-210ENST00000530742 MYT1LQ9UL68 1186 aa16.57■□□□□ 0.24
CLINT1-210ENST00000530742 KIF20BQ96Q89 1820 aa16.56■□□□□ 0.24
CLINT1-210ENST00000530742 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
CLINT1-210ENST00000530742 TCERG1O14776 1098 aaKnown RBP16.55■□□□□ 0.24
CLINT1-210ENST00000530742 GOLGA2Q08379 1002 aa16.55■□□□□ 0.24
CLINT1-210ENST00000530742 CDC42BPGQ6DT37 1551 aa16.54■□□□□ 0.24
CLINT1-210ENST00000530742 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
CLINT1-210ENST00000530742 ARHGEF40Q8TER5 1519 aa16.53■□□□□ 0.24
CLINT1-210ENST00000530742 VIRMAQ69YN4 1812 aaKnown RBP16.53■□□□□ 0.24
CLINT1-210ENST00000530742 GGT6Q6P531 493 aa16.53■□□□□ 0.24
CLINT1-210ENST00000530742 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
CLINT1-210ENST00000530742 COL3A1P02461 1466 aaPredicted RBP16.53■□□□□ 0.24
CLINT1-210ENST00000530742 NLRP1Q9C000 1473 aa16.53■□□□□ 0.24
CLINT1-210ENST00000530742 KIF13AQ9H1H9 1805 aa16.52■□□□□ 0.24
CLINT1-210ENST00000530742 CD163L1Q9NR16 1453 aa16.52■□□□□ 0.24
CLINT1-210ENST00000530742 ABCC11Q96J66 1382 aa16.52■□□□□ 0.24
CLINT1-210ENST00000530742 NRXN3Q9Y4C0 1643 aa16.51■□□□□ 0.23
CLINT1-210ENST00000530742 EVC2Q86UK5 1308 aa16.51■□□□□ 0.23
CLINT1-210ENST00000530742 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
CLINT1-210ENST00000530742 IDI1Q13907 227 aa16.5■□□□□ 0.23
CLINT1-210ENST00000530742 E9PSI1 815 aa16.5■□□□□ 0.23
CLINT1-210ENST00000530742 CGNL1Q0VF96 1302 aa16.49■□□□□ 0.23
CLINT1-210ENST00000530742 YTHDC2Q9H6S0 1430 aaKnown RBP16.48■□□□□ 0.23
CLINT1-210ENST00000530742 A2ML1A8K2U0 1454 aa16.47■□□□□ 0.23
CLINT1-210ENST00000530742 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
CLINT1-210ENST00000530742 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
CLINT1-210ENST00000530742 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
CLINT1-210ENST00000530742 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.45■□□□□ 0.22
CLINT1-210ENST00000530742 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
CLINT1-210ENST00000530742 ATP7BP35670 1465 aa16.43■□□□□ 0.22
CLINT1-210ENST00000530742 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
CLINT1-210ENST00000530742 TSPOAP1O95153 1857 aa16.43■□□□□ 0.22
CLINT1-210ENST00000530742 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
CLINT1-210ENST00000530742 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
CLINT1-210ENST00000530742 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
CLINT1-210ENST00000530742 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
CLINT1-210ENST00000530742 APAF1O14727 1248 aa16.42■□□□□ 0.22
CLINT1-210ENST00000530742 BACH2Q9BYV9 841 aa16.42■□□□□ 0.22
CLINT1-210ENST00000530742 AKAP12Q02952 1782 aa16.42■□□□□ 0.22
CLINT1-210ENST00000530742 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
CLINT1-210ENST00000530742 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
CLINT1-210ENST00000530742 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
CLINT1-210ENST00000530742 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
CLINT1-210ENST00000530742 AAMPQ13685 434 aa16.42■□□□□ 0.22
CLINT1-210ENST00000530742 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
CLINT1-210ENST00000530742 MORC1Q86VD1 984 aa16.41■□□□□ 0.22
CLINT1-210ENST00000530742 WWC1Q8IX03 1113 aa16.41■□□□□ 0.22
CLINT1-210ENST00000530742 CPS1P31327 1500 aa16.41■□□□□ 0.22
CLINT1-210ENST00000530742 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
CLINT1-210ENST00000530742 TECPR2O15040 1411 aa16.4■□□□□ 0.22
CLINT1-210ENST00000530742 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
CLINT1-210ENST00000530742 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
CLINT1-210ENST00000530742 PLIN1O60240 522 aa16.39■□□□□ 0.21
CLINT1-210ENST00000530742 C20orf194Q5TEA3 1177 aa16.39■□□□□ 0.21
CLINT1-210ENST00000530742 ZMYM3Q14202 1370 aa16.39■□□□□ 0.21
CLINT1-210ENST00000530742 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
CLINT1-210ENST00000530742 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
CLINT1-210ENST00000530742 PDE4AP27815 886 aa16.37■□□□□ 0.21
CLINT1-210ENST00000530742 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
CLINT1-210ENST00000530742 NOP58Q9Y2X3 529 aaKnown RBP16.36■□□□□ 0.21
CLINT1-210ENST00000530742 TOPAZ1Q8N9V7 1692 aa16.36■□□□□ 0.21
CLINT1-210ENST00000530742 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
CLINT1-210ENST00000530742 C3P01024 1663 aa16.35■□□□□ 0.21
CLINT1-210ENST00000530742 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
CLINT1-210ENST00000530742 CFAP53Q96M91 514 aa16.35■□□□□ 0.21
CLINT1-210ENST00000530742 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
CLINT1-210ENST00000530742 RIMS2Q9UQ26 1411 aa16.35■□□□□ 0.21
CLINT1-210ENST00000530742 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
CLINT1-210ENST00000530742 CPSF1Q10570 1443 aaKnown RBP16.34■□□□□ 0.21
CLINT1-210ENST00000530742 MTHFSP49914 203 aa16.34■□□□□ 0.21
CLINT1-210ENST00000530742 NRKQ7Z2Y5 1582 aa16.33■□□□□ 0.21
CLINT1-210ENST00000530742 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
CLINT1-210ENST00000530742 ITSN1Q15811 1721 aa16.33■□□□□ 0.2
CLINT1-210ENST00000530742 IL16Q14005 1332 aa16.32■□□□□ 0.2
CLINT1-210ENST00000530742 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
CLINT1-210ENST00000530742 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
CLINT1-210ENST00000530742 TCP11L2Q8N4U5 519 aa16.31■□□□□ 0.2
CLINT1-210ENST00000530742 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
CLINT1-210ENST00000530742 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
CLINT1-210ENST00000530742 RIMS1Q86UR5 1692 aaKnown RBP16.3■□□□□ 0.2
CLINT1-210ENST00000530742 NALCNQ8IZF0 1738 aa16.29■□□□□ 0.2
CLINT1-210ENST00000530742 PPIP5K1Q6PFW1 1433 aa16.29■□□□□ 0.2
CLINT1-210ENST00000530742 FYB1O15117 783 aa16.29■□□□□ 0.2
CLINT1-210ENST00000530742 RARSP54136 660 aaKnown RBP16.28■□□□□ 0.2
CLINT1-210ENST00000530742 FBXO31Q5XUX0 539 aaPredicted RBP16.28■□□□□ 0.2
CLINT1-210ENST00000530742 PRAM1Q96QH2 718 aa16.27■□□□□ 0.2
CLINT1-210ENST00000530742 BCAR3O75815 825 aa16.27■□□□□ 0.2
CLINT1-210ENST00000530742 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
CLINT1-210ENST00000530742 AATKQ6ZMQ8 1374 aa16.27■□□□□ 0.19
CLINT1-210ENST00000530742 EDC4Q6P2E9 1401 aaKnown RBP16.27■□□□□ 0.19
CLINT1-210ENST00000530742 CDK12Q9NYV4 1490 aaPredicted RBP16.27■□□□□ 0.19
CLINT1-210ENST00000530742 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
CLINT1-210ENST00000530742 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLINT1-210ENST00000530742 PAK3O75914 559 aaPredicted RBP16.24■□□□□ 0.19
CLINT1-210ENST00000530742 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
CLINT1-210ENST00000530742 ERICH6Q7L0X2 663 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms