RNA–Protein interactions for RNA: ENST00000530170.1

RPS3-215, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-215ENST00000530170 CEP170BQ9Y4F5 1589 aaPredicted RBP12.31□□□□□ -0.44
RPS3-215ENST00000530170 ZFYVE9O95405 1425 aa12.31□□□□□ -0.44
RPS3-215ENST00000530170 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
RPS3-215ENST00000530170 BCANQ96GW7 911 aa12.31□□□□□ -0.44
RPS3-215ENST00000530170 RPGRIP1LQ68CZ1 1315 aa12.31□□□□□ -0.44
RPS3-215ENST00000530170 NEXMIFQ5QGS0 1516 aa12.31□□□□□ -0.44
RPS3-215ENST00000530170 RGL3Q3MIN7 710 aa12.3□□□□□ -0.44
RPS3-215ENST00000530170 KIF3BO15066 747 aa12.29□□□□□ -0.44
RPS3-215ENST00000530170 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
RPS3-215ENST00000530170 ALKQ9UM73 1620 aa12.28□□□□□ -0.44
RPS3-215ENST00000530170 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.45
RPS3-215ENST00000530170 THEMISQ8N1K5 641 aaPredicted RBP12.26□□□□□ -0.45
RPS3-215ENST00000530170 PUS7Q96PZ0 661 aaKnown RBP12.26□□□□□ -0.45
RPS3-215ENST00000530170 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
RPS3-215ENST00000530170 FANCIQ9NVI1 1328 aa12.26□□□□□ -0.45
RPS3-215ENST00000530170 A2ML1A8K2U0 1454 aa12.26□□□□□ -0.45
RPS3-215ENST00000530170 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
RPS3-215ENST00000530170 NGEFQ8N5V2 710 aa12.25□□□□□ -0.45
RPS3-215ENST00000530170 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
RPS3-215ENST00000530170 FBXO31Q5XUX0 539 aaPredicted RBP12.24□□□□□ -0.45
RPS3-215ENST00000530170 PANK3Q9H999 370 aa12.24□□□□□ -0.45
RPS3-215ENST00000530170 TMEM131LA2VDJ0 1609 aa12.23□□□□□ -0.45
RPS3-215ENST00000530170 ZNF142P52746 1687 aaPredicted RBP12.22□□□□□ -0.45
RPS3-215ENST00000530170 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
RPS3-215ENST00000530170 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
RPS3-215ENST00000530170 NINLQ9Y2I6 1382 aa12.22□□□□□ -0.45
RPS3-215ENST00000530170 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
RPS3-215ENST00000530170 MYO5BQ9ULV0 1848 aa12.22□□□□□ -0.45
RPS3-215ENST00000530170 LRRC7Q96NW7 1537 aa12.21□□□□□ -0.45
RPS3-215ENST00000530170 KNSTRNQ9Y448 316 aa12.21□□□□□ -0.45
RPS3-215ENST00000530170 CFAP65Q6ZU64 1925 aaKnown RBP12.21□□□□□ -0.46
RPS3-215ENST00000530170 NSD2O96028 1365 aa12.2□□□□□ -0.46
RPS3-215ENST00000530170 TNRQ92752 1358 aa12.2□□□□□ -0.46
RPS3-215ENST00000530170 SETD1AO15047 1707 aaKnown RBP12.2□□□□□ -0.46
RPS3-215ENST00000530170 RRP1P56182 461 aaKnown RBP12.19□□□□□ -0.46
RPS3-215ENST00000530170 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
RPS3-215ENST00000530170 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
RPS3-215ENST00000530170 ZNF521Q96K83 1311 aa12.18□□□□□ -0.46
RPS3-215ENST00000530170 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
RPS3-215ENST00000530170 TULP4Q9NRJ4 1543 aa12.18□□□□□ -0.46
RPS3-215ENST00000530170 PPP2R1AP30153 589 aa12.18□□□□□ -0.46
RPS3-215ENST00000530170 C14orf93Q9H972 538 aaKnown RBP12.18□□□□□ -0.46
RPS3-215ENST00000530170 DLC1Q96QB1 1528 aa12.17□□□□□ -0.46
RPS3-215ENST00000530170 MED14O60244 1454 aa12.17□□□□□ -0.46
RPS3-215ENST00000530170 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
RPS3-215ENST00000530170 MSH5O43196 834 aa12.16□□□□□ -0.46
RPS3-215ENST00000530170 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
RPS3-215ENST00000530170 ZNF772Q68DY9 489 aaPredicted RBP12.16□□□□□ -0.46
RPS3-215ENST00000530170 RCAN3Q9UKA8 241 aa12.16□□□□□ -0.46
RPS3-215ENST00000530170 KNDC1Q76NI1 1749 aa12.16□□□□□ -0.46
RPS3-215ENST00000530170 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
RPS3-215ENST00000530170 SLC52A1Q9NWF4 448 aa12.15□□□□□ -0.46
RPS3-215ENST00000530170 RXRBP28702 533 aa12.14□□□□□ -0.47
RPS3-215ENST00000530170 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
RPS3-215ENST00000530170 CFAP70Q5T0N1 1121 aa12.14□□□□□ -0.47
RPS3-215ENST00000530170 CC2D1BQ5T0F9 858 aaKnown RBP12.13□□□□□ -0.47
RPS3-215ENST00000530170 ANP32EQ9BTT0 268 aa12.13□□□□□ -0.47
RPS3-215ENST00000530170 KIF20BQ96Q89 1820 aa12.13□□□□□ -0.47
RPS3-215ENST00000530170 ANKRD36BQ8N2N9 1353 aa12.12□□□□□ -0.47
RPS3-215ENST00000530170 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
RPS3-215ENST00000530170 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPS3-215ENST00000530170 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
RPS3-215ENST00000530170 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
RPS3-215ENST00000530170 VIRMAQ69YN4 1812 aaKnown RBP12.1□□□□□ -0.47
RPS3-215ENST00000530170 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
RPS3-215ENST00000530170 B4GALNT3Q6L9W6 998 aa12.1□□□□□ -0.47
RPS3-215ENST00000530170 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
RPS3-215ENST00000530170 NKTRP30414 1462 aaKnown RBP12.09□□□□□ -0.47
RPS3-215ENST00000530170 JCADQ9P266 1359 aa12.09□□□□□ -0.47
RPS3-215ENST00000530170 RBM33Q96EV2 1170 aaKnown RBP12.09□□□□□ -0.47
RPS3-215ENST00000530170 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
RPS3-215ENST00000530170 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
RPS3-215ENST00000530170 TRMT2AQ8IZ69 625 aaKnown RBP12.08□□□□□ -0.48
RPS3-215ENST00000530170 ABCC11Q96J66 1382 aa12.07□□□□□ -0.48
RPS3-215ENST00000530170 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
RPS3-215ENST00000530170 MS4A1P11836 297 aa12.07□□□□□ -0.48
RPS3-215ENST00000530170 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
RPS3-215ENST00000530170 ADAMTS8Q9UP79 889 aa12.07□□□□□ -0.48
RPS3-215ENST00000530170 NLRP1Q9C000 1473 aa12.07□□□□□ -0.48
RPS3-215ENST00000530170 STRCP1A6NGW2 1772 aa12.06□□□□□ -0.48
RPS3-215ENST00000530170 DUSP27Q5VZP5 1158 aa12.06□□□□□ -0.48
RPS3-215ENST00000530170 PROSER2Q86WR7 435 aaPredicted RBP12.06□□□□□ -0.48
RPS3-215ENST00000530170 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
RPS3-215ENST00000530170 EVC2Q86UK5 1308 aa12.06□□□□□ -0.48
RPS3-215ENST00000530170 TMEM94Q12767 1356 aa12.05□□□□□ -0.48
RPS3-215ENST00000530170 NRXN3Q9Y4C0 1643 aa12.05□□□□□ -0.48
RPS3-215ENST00000530170 NUTM2BA6NNL0 878 aaPredicted RBP12.05□□□□□ -0.48
RPS3-215ENST00000530170 NUTM2EB1AL46 878 aaPredicted RBP12.05□□□□□ -0.48
RPS3-215ENST00000530170 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
RPS3-215ENST00000530170 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
RPS3-215ENST00000530170 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
RPS3-215ENST00000530170 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
RPS3-215ENST00000530170 NUTM2AQ8IVF1 878 aaPredicted RBP12.05□□□□□ -0.48
RPS3-215ENST00000530170 ATP7BP35670 1465 aa12.05□□□□□ -0.48
RPS3-215ENST00000530170 YTHDC2Q9H6S0 1430 aaKnown RBP12.04□□□□□ -0.48
RPS3-215ENST00000530170 COL3A1P02461 1466 aaPredicted RBP12.04□□□□□ -0.48
RPS3-215ENST00000530170 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.04□□□□□ -0.48
RPS3-215ENST00000530170 CARD14Q9BXL6 1004 aa12.04□□□□□ -0.48
RPS3-215ENST00000530170 SLAIN2Q9P270 581 aa12.04□□□□□ -0.48
RPS3-215ENST00000530170 E9PSI1 815 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms