RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-233ENST00000529552 NAIPQ13075 1403 aa13.81□□□□□ -0.2
FGFR1-233ENST00000529552 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
FGFR1-233ENST00000529552 TRIM52Q96A61 297 aa13.79□□□□□ -0.2
FGFR1-233ENST00000529552 LRRC59Q96AG4 307 aaKnown RBP13.79□□□□□ -0.2
FGFR1-233ENST00000529552 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
FGFR1-233ENST00000529552 RXRBP28702 533 aa13.78□□□□□ -0.2
FGFR1-233ENST00000529552 PTCH1Q13635 1447 aa13.78□□□□□ -0.2
FGFR1-233ENST00000529552 PPLO60437 1756 aa13.78□□□□□ -0.2
FGFR1-233ENST00000529552 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
FGFR1-233ENST00000529552 HFM1A2PYH4 1435 aa13.76□□□□□ -0.21
FGFR1-233ENST00000529552 AFF2P51816 1311 aa13.76□□□□□ -0.21
FGFR1-233ENST00000529552 ABCB7O75027 752 aa13.76□□□□□ -0.21
FGFR1-233ENST00000529552 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
FGFR1-233ENST00000529552 PNPLA6Q8IY17 1366 aa13.75□□□□□ -0.21
FGFR1-233ENST00000529552 RPGRIP1LQ68CZ1 1315 aa13.75□□□□□ -0.21
FGFR1-233ENST00000529552 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
FGFR1-233ENST00000529552 LAMC1P11047 1609 aa13.74□□□□□ -0.21
FGFR1-233ENST00000529552 C8orf37Q96NL8 207 aa13.73□□□□□ -0.21
FGFR1-233ENST00000529552 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
FGFR1-233ENST00000529552 DDX17Q92841 729 aaKnown RBP13.72□□□□□ -0.21
FGFR1-233ENST00000529552 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
FGFR1-233ENST00000529552 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
FGFR1-233ENST00000529552 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.22
FGFR1-233ENST00000529552 RBM6P78332 1123 aaKnown RBP13.69□□□□□ -0.22
FGFR1-233ENST00000529552 NGLY1Q96IV0 654 aa13.69□□□□□ -0.22
FGFR1-233ENST00000529552 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
FGFR1-233ENST00000529552 ADAMTS2O95450 1211 aa13.68□□□□□ -0.22
FGFR1-233ENST00000529552 ORAI2Q96SN7 254 aa13.68□□□□□ -0.22
FGFR1-233ENST00000529552 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
FGFR1-233ENST00000529552 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
FGFR1-233ENST00000529552 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
FGFR1-233ENST00000529552 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
FGFR1-233ENST00000529552 RGS12O14924 1447 aa13.67□□□□□ -0.22
FGFR1-233ENST00000529552 KNDC1Q76NI1 1749 aa13.67□□□□□ -0.22
FGFR1-233ENST00000529552 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
FGFR1-233ENST00000529552 MARF1Q9Y4F3 1742 aaKnown RBP13.65□□□□□ -0.22
FGFR1-233ENST00000529552 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
FGFR1-233ENST00000529552 LRPPRCP42704 1394 aaKnown RBP13.64□□□□□ -0.23
FGFR1-233ENST00000529552 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
FGFR1-233ENST00000529552 USP21Q9UK80 565 aa13.64□□□□□ -0.23
FGFR1-233ENST00000529552 TRPC5Q9UL62 973 aaPredicted RBP13.63□□□□□ -0.23
FGFR1-233ENST00000529552 TECPR2O15040 1411 aa13.63□□□□□ -0.23
FGFR1-233ENST00000529552 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
FGFR1-233ENST00000529552 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
FGFR1-233ENST00000529552 RGL3Q3MIN7 710 aa13.62□□□□□ -0.23
FGFR1-233ENST00000529552 STK26Q9P289 416 aa13.62□□□□□ -0.23
FGFR1-233ENST00000529552 ADGRF5Q8IZF2 1346 aa13.62□□□□□ -0.23
FGFR1-233ENST00000529552 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
FGFR1-233ENST00000529552 SPATA31E1Q6ZUB1 1445 aa13.61□□□□□ -0.23
FGFR1-233ENST00000529552 MYOM2P54296 1465 aa13.61□□□□□ -0.23
FGFR1-233ENST00000529552 PXDNQ92626 1479 aa13.61□□□□□ -0.23
FGFR1-233ENST00000529552 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
FGFR1-233ENST00000529552 PIK3C2GO75747 1445 aa13.59□□□□□ -0.23
FGFR1-233ENST00000529552 ATRNO75882 1429 aa13.59□□□□□ -0.23
FGFR1-233ENST00000529552 FNBP4Q8N3X1 1017 aaPredicted RBP13.59□□□□□ -0.23
FGFR1-233ENST00000529552 MPHOSPH9Q99550 1183 aa13.59□□□□□ -0.23
FGFR1-233ENST00000529552 ABCC11Q96J66 1382 aa13.58□□□□□ -0.23
FGFR1-233ENST00000529552 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
FGFR1-233ENST00000529552 FOXO3O43524 673 aa13.58□□□□□ -0.24
FGFR1-233ENST00000529552 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
FGFR1-233ENST00000529552 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
FGFR1-233ENST00000529552 YTHDC2Q9H6S0 1430 aaKnown RBP13.57□□□□□ -0.24
FGFR1-233ENST00000529552 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
FGFR1-233ENST00000529552 RGPD8O14715 1765 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-233ENST00000529552 TMEM132EQ6IEE7 984 aa13.55□□□□□ -0.24
FGFR1-233ENST00000529552 PLEKHH1Q9ULM0 1364 aa13.55□□□□□ -0.24
FGFR1-233ENST00000529552 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
FGFR1-233ENST00000529552 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
FGFR1-233ENST00000529552 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
FGFR1-233ENST00000529552 BCL9LQ86UU0 1499 aa13.53□□□□□ -0.24
FGFR1-233ENST00000529552 SIRT1Q96EB6 747 aa13.52□□□□□ -0.25
FGFR1-233ENST00000529552 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
FGFR1-233ENST00000529552 NRXN1Q9ULB1 1477 aa13.51□□□□□ -0.25
FGFR1-233ENST00000529552 TNS3Q68CZ2 1445 aa13.51□□□□□ -0.25
FGFR1-233ENST00000529552 PSME1Q06323 249 aa13.51□□□□□ -0.25
FGFR1-233ENST00000529552 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
FGFR1-233ENST00000529552 GJD4Q96KN9 370 aaPredicted RBP13.51□□□□□ -0.25
FGFR1-233ENST00000529552 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
FGFR1-233ENST00000529552 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
FGFR1-233ENST00000529552 CCDC125Q86Z20 511 aa13.5□□□□□ -0.25
FGFR1-233ENST00000529552 UNC5CLQ8IV45 518 aa13.5□□□□□ -0.25
FGFR1-233ENST00000529552 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
FGFR1-233ENST00000529552 PHF8Q9UPP1 1060 aa13.5□□□□□ -0.25
FGFR1-233ENST00000529552 ABCA3Q99758 1704 aa13.5□□□□□ -0.25
FGFR1-233ENST00000529552 NWD2Q9ULI1 1742 aa13.5□□□□□ -0.25
FGFR1-233ENST00000529552 SLIT2O94813 1529 aa13.49□□□□□ -0.25
FGFR1-233ENST00000529552 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
FGFR1-233ENST00000529552 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
FGFR1-233ENST00000529552 ARHGEF10O15013 1369 aa13.48□□□□□ -0.25
FGFR1-233ENST00000529552 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
FGFR1-233ENST00000529552 PRAM1Q96QH2 718 aa13.48□□□□□ -0.25
FGFR1-233ENST00000529552 POGKQ9P215 609 aa13.48□□□□□ -0.25
FGFR1-233ENST00000529552 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
FGFR1-233ENST00000529552 ADGRB2O60241 1585 aa13.48□□□□□ -0.25
FGFR1-233ENST00000529552 GLI3P10071 1580 aa13.48□□□□□ -0.25
FGFR1-233ENST00000529552 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
FGFR1-233ENST00000529552 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
FGFR1-233ENST00000529552 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
FGFR1-233ENST00000529552 BRWD3Q6RI45 1802 aa13.47□□□□□ -0.25
FGFR1-233ENST00000529552 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms