RNA–Protein interactions for RNA: ENST00000528900.5

RDX-206, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-206ENST00000528900 SAFB2Q14151 953 aaKnown RBP eCLIP37.62■■■■□ 3.61
RDX-206ENST00000528900 SIRT1Q96EB6 747 aa37.62■■■■□ 3.61
RDX-206ENST00000528900 GTF3C3Q9Y5Q9 886 aa37.62■■■■□ 3.61
RDX-206ENST00000528900 TXNDC2Q86VQ3 553 aa37.61■■■■□ 3.61
RDX-206ENST00000528900 TECPR2O15040 1411 aa37.61■■■■□ 3.61
RDX-206ENST00000528900 PLPPR3Q6T4P5 718 aa37.6■■■■□ 3.61
RDX-206ENST00000528900 LTKP29376 864 aa37.59■■■■□ 3.61
RDX-206ENST00000528900 BCANQ96GW7 911 aa37.59■■■■□ 3.61
RDX-206ENST00000528900 ADAMTS13Q76LX8 1427 aa37.59■■■■□ 3.61
RDX-206ENST00000528900 CARD14Q9BXL6 1004 aa37.58■■■■□ 3.61
RDX-206ENST00000528900 FAM135BQ49AJ0 1406 aa37.57■■■■□ 3.61
RDX-206ENST00000528900 ATAD2Q6PL18 1390 aa37.57■■■■□ 3.61
RDX-206ENST00000528900 MINK1Q8N4C8 1332 aaPredicted RBP37.57■■■■□ 3.6
RDX-206ENST00000528900 SLC12A5Q9H2X9 1139 aa37.57■■■■□ 3.6
RDX-206ENST00000528900 CEP170BQ9Y4F5 1589 aaPredicted RBP37.56■■■■□ 3.6
RDX-206ENST00000528900 CPS1P31327 1500 aa37.55■■■■□ 3.6
RDX-206ENST00000528900 MED14O60244 1454 aa37.54■■■■□ 3.6
RDX-206ENST00000528900 CABP2Q9NPB3 220 aa37.54■■■■□ 3.6
RDX-206ENST00000528900 USP32Q8NFA0 1604 aa37.54■■■■□ 3.6
RDX-206ENST00000528900 SRPK2P78362 688 aaKnown RBP37.53■■■■□ 3.6
RDX-206ENST00000528900 ANKRD36BQ8N2N9 1353 aa37.53■■■■□ 3.6
RDX-206ENST00000528900 NSD3Q9BZ95 1437 aa37.49■■■■□ 3.59
RDX-206ENST00000528900 ZBED9Q6R2W3 1325 aa37.49■■■■□ 3.59
RDX-206ENST00000528900 ZNF142P52746 1687 aaPredicted RBP37.48■■■■□ 3.59
RDX-206ENST00000528900 PPP2R1AP30153 589 aa37.47■■■■□ 3.59
RDX-206ENST00000528900 WAPLQ7Z5K2 1190 aa37.47■■■■□ 3.59
RDX-206ENST00000528900 DIP2AQ14689 1571 aa37.47■■■■□ 3.59
RDX-206ENST00000528900 PLEKHH1Q9ULM0 1364 aa37.46■■■■□ 3.59
RDX-206ENST00000528900 CDK19Q9BWU1 502 aa37.46■■■■□ 3.59
RDX-206ENST00000528900 SETD1BQ9UPS6 1966 aaKnown RBP37.46■■■■□ 3.59
RDX-206ENST00000528900 TBX22Q9Y458 520 aa37.44■■■■□ 3.58
RDX-206ENST00000528900 INSRP06213 1382 aa37.44■■■■□ 3.58
RDX-206ENST00000528900 CGNL1Q0VF96 1302 aa37.4■■■■□ 3.58
RDX-206ENST00000528900 NSD2O96028 1365 aa37.39■■■■□ 3.58
RDX-206ENST00000528900 TERF2IPQ9NYB0 399 aa37.38■■■■□ 3.58
RDX-206ENST00000528900 WASLO00401 505 aaPredicted RBP37.34■■■■□ 3.57
RDX-206ENST00000528900 SLC26A8Q96RN1 970 aa37.34■■■■□ 3.57
RDX-206ENST00000528900 A0A1W2PP64 1363 aa37.34■■■■□ 3.57
RDX-206ENST00000528900 ROBO2Q9HCK4 1378 aa37.33■■■■□ 3.57
RDX-206ENST00000528900 PTPRUQ92729 1446 aa37.31■■■■□ 3.56
RDX-206ENST00000528900 ADGRB2O60241 1585 aa37.3■■■■□ 3.56
RDX-206ENST00000528900 CD163L1Q9NR16 1453 aa37.3■■■■□ 3.56
RDX-206ENST00000528900 HDGFL2Q7Z4V5 671 aaPredicted RBP37.29■■■■□ 3.56
RDX-206ENST00000528900 MORC1Q86VD1 984 aa37.29■■■■□ 3.56
RDX-206ENST00000528900 ATP7BP35670 1465 aa37.29■■■■□ 3.56
RDX-206ENST00000528900 PIK3R4Q99570 1358 aa37.28■■■■□ 3.56
RDX-206ENST00000528900 PTCH1Q13635 1447 aa37.27■■■■□ 3.56
RDX-206ENST00000528900 ANKLE2Q86XL3 938 aa37.27■■■■□ 3.56
RDX-206ENST00000528900 CABP1Q9NZU7 370 aa37.24■■■■□ 3.55
RDX-206ENST00000528900 AMOTL2Q9Y2J4 779 aa37.24■■■■□ 3.55
RDX-206ENST00000528900 BLMP54132 1417 aaPredicted RBP37.24■■■■□ 3.55
RDX-206ENST00000528900 XRN1Q8IZH2 1706 aaKnown RBP37.21■■■■□ 3.55
RDX-206ENST00000528900 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.21■■■■□ 3.55
RDX-206ENST00000528900 WDR43Q15061 677 aaKnown RBP eCLIP37.19■■■■□ 3.54
RDX-206ENST00000528900 POLR3AO14802 1390 aaPredicted RBP37.18■■■■□ 3.54
RDX-206ENST00000528900 ANKRD26Q9UPS8 1709 aa37.18■■■■□ 3.54
RDX-206ENST00000528900 PPIP5K1Q6PFW1 1433 aa37.17■■■■□ 3.54
RDX-206ENST00000528900 NUDT16Q96DE0 195 aaKnown RBP37.17■■■■□ 3.54
RDX-206ENST00000528900 CCDC61Q9Y6R9 512 aa37.16■■■■□ 3.54
RDX-206ENST00000528900 CPSF1Q10570 1443 aaKnown RBP37.13■■■■□ 3.53
RDX-206ENST00000528900 ADAMTS8Q9UP79 889 aa37.12■■■■□ 3.53
RDX-206ENST00000528900 CDC42BPGQ6DT37 1551 aa37.12■■■■□ 3.53
RDX-206ENST00000528900 KIF20BQ96Q89 1820 aa37.11■■■■□ 3.53
RDX-206ENST00000528900 FYB1O15117 783 aa37.09■■■■□ 3.53
RDX-206ENST00000528900 SMG6Q86US8 1419 aaKnown RBP37.08■■■■□ 3.53
RDX-206ENST00000528900 EDC4Q6P2E9 1401 aaKnown RBP37.07■■■■□ 3.52
RDX-206ENST00000528900 CHD2O14647 1828 aaKnown RBP37.06■■■■□ 3.52
RDX-206ENST00000528900 TOPAZ1Q8N9V7 1692 aa37.06■■■■□ 3.52
RDX-206ENST00000528900 AKAP12Q02952 1782 aa37.05■■■■□ 3.52
RDX-206ENST00000528900 PRR36Q9H6K5 1346 aa37.04■■■■□ 3.52
RDX-206ENST00000528900 ITSN1Q15811 1721 aa37.04■■■■□ 3.52
RDX-206ENST00000528900 MON2Q7Z3U7 1717 aa37.04■■■■□ 3.52
RDX-206ENST00000528900 TNNT2P45379 298 aaPredicted RBP37.03■■■■□ 3.52
RDX-206ENST00000528900 ZNF692Q9BU19 519 aaPredicted RBP37.03■■■■□ 3.52
RDX-206ENST00000528900 CFAP53Q96M91 514 aa37.03■■■■□ 3.52
RDX-206ENST00000528900 GGNBP2Q9H3C7 697 aa37.03■■■■□ 3.52
RDX-206ENST00000528900 NPHP4O75161 1426 aaPredicted RBP37.02■■■■□ 3.52
RDX-206ENST00000528900 NEFLP07196 543 aa37.01■■■■□ 3.52
RDX-206ENST00000528900 PDE3BQ13370 1112 aa37.01■■■■□ 3.52
RDX-206ENST00000528900 KCNA6P17658 529 aa37■■■■□ 3.51
RDX-206ENST00000528900 NUDCQ9Y266 331 aa37■■■■□ 3.51
RDX-206ENST00000528900 MTHFSP49914 203 aa36.99■■■■□ 3.51
RDX-206ENST00000528900 PLEKHG3A1L390 1219 aa36.98■■■■□ 3.51
RDX-206ENST00000528900 SHPRHQ149N8 1683 aa36.96■■■■□ 3.51
RDX-206ENST00000528900 SUPT16HQ9Y5B9 1047 aaKnown RBP36.94■■■■□ 3.5
RDX-206ENST00000528900 NCKAP5LQ9HCH0 1330 aa36.93■■■■□ 3.5
RDX-206ENST00000528900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.92■■■■□ 3.5
RDX-206ENST00000528900 ANKARQ7Z5J8 1434 aa36.9■■■■□ 3.5
RDX-206ENST00000528900 SENP3-EIF4A1A0A087X0R7 540 aa36.89■■■■□ 3.5
RDX-206ENST00000528900 NGEFQ8N5V2 710 aa36.88■■■■□ 3.49
RDX-206ENST00000528900 FKBP8Q14318 412 aa36.87■■■■□ 3.49
RDX-206ENST00000528900 ACEP12821 1306 aa36.85■■■■□ 3.49
RDX-206ENST00000528900 SALL2Q9Y467 1007 aaPredicted RBP36.85■■■■□ 3.49
RDX-206ENST00000528900 FMN2Q9NZ56 1722 aa36.85■■■■□ 3.49
RDX-206ENST00000528900 NRKQ7Z2Y5 1582 aa36.85■■■■□ 3.49
RDX-206ENST00000528900 NKTRP30414 1462 aaKnown RBP36.84■■■■□ 3.49
RDX-206ENST00000528900 NWD1Q149M9 1564 aa36.81■■■■□ 3.48
RDX-206ENST00000528900 USP6P35125 1406 aa36.81■■■■□ 3.48
RDX-206ENST00000528900 NUTM2FA1L443 756 aa36.8■■■■□ 3.48
RDX-206ENST00000528900 COL3A1P02461 1466 aaPredicted RBP36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms