RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PTPRUQ92729 1446 aa11.07□□□□□ -0.64
SSBP3-211ENST00000528787 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
SSBP3-211ENST00000528787 ZNF335Q9H4Z2 1342 aaPredicted RBP11.07□□□□□ -0.64
SSBP3-211ENST00000528787 ADGRL3Q9HAR2 1447 aa11.06□□□□□ -0.64
SSBP3-211ENST00000528787 TMEM94Q12767 1356 aa11.05□□□□□ -0.64
SSBP3-211ENST00000528787 ROBO2Q9HCK4 1378 aa11.05□□□□□ -0.64
SSBP3-211ENST00000528787 LRRC7Q96NW7 1537 aa11.05□□□□□ -0.64
SSBP3-211ENST00000528787 CDC42BPGQ6DT37 1551 aa11.05□□□□□ -0.64
SSBP3-211ENST00000528787 NINLQ9Y2I6 1382 aa11.04□□□□□ -0.64
SSBP3-211ENST00000528787 STRCP1A6NGW2 1772 aa11.04□□□□□ -0.64
SSBP3-211ENST00000528787 TOM1O60784 492 aa11.04□□□□□ -0.64
SSBP3-211ENST00000528787 LTBP4Q8N2S1 1624 aa11.04□□□□□ -0.64
SSBP3-211ENST00000528787 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
SSBP3-211ENST00000528787 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
SSBP3-211ENST00000528787 ANKARQ7Z5J8 1434 aa11.03□□□□□ -0.64
SSBP3-211ENST00000528787 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
SSBP3-211ENST00000528787 NALCNQ8IZF0 1738 aa11.01□□□□□ -0.65
SSBP3-211ENST00000528787 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-211ENST00000528787 WASLO00401 505 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-211ENST00000528787 HSPA5P11021 654 aaKnown RBP11.01□□□□□ -0.65
SSBP3-211ENST00000528787 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
SSBP3-211ENST00000528787 WAPLQ7Z5K2 1190 aa11.01□□□□□ -0.65
SSBP3-211ENST00000528787 SAFB2Q14151 953 aaKnown RBP eCLIP11□□□□□ -0.65
SSBP3-211ENST00000528787 CERKQ8TCT0 537 aa11□□□□□ -0.65
SSBP3-211ENST00000528787 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
SSBP3-211ENST00000528787 XIRP1Q702N8 1843 aaKnown RBP11□□□□□ -0.65
SSBP3-211ENST00000528787 TULP4Q9NRJ4 1543 aa10.99□□□□□ -0.65
SSBP3-211ENST00000528787 FMN2Q9NZ56 1722 aa10.99□□□□□ -0.65
SSBP3-211ENST00000528787 KIF1AQ12756 1690 aa10.98□□□□□ -0.65
SSBP3-211ENST00000528787 TESK2Q96S53 571 aa10.98□□□□□ -0.65
SSBP3-211ENST00000528787 CDK19Q9BWU1 502 aa10.98□□□□□ -0.65
SSBP3-211ENST00000528787 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
SSBP3-211ENST00000528787 TERF2IPQ9NYB0 399 aa10.97□□□□□ -0.65
SSBP3-211ENST00000528787 BRD4O60885 1362 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-211ENST00000528787 PLEKHH1Q9ULM0 1364 aa10.97□□□□□ -0.65
SSBP3-211ENST00000528787 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-211ENST00000528787 SLAIN2Q9P270 581 aa10.96□□□□□ -0.65
SSBP3-211ENST00000528787 HDGFL2Q7Z4V5 671 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-211ENST00000528787 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
SSBP3-211ENST00000528787 HIRIP3Q9BW71 556 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-211ENST00000528787 ATP7BP35670 1465 aa10.94□□□□□ -0.66
SSBP3-211ENST00000528787 PSME1Q06323 249 aa10.94□□□□□ -0.66
SSBP3-211ENST00000528787 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
SSBP3-211ENST00000528787 MST1RQ04912 1400 aa10.93□□□□□ -0.66
SSBP3-211ENST00000528787 NPHP3Q7Z494 1330 aa10.93□□□□□ -0.66
SSBP3-211ENST00000528787 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-211ENST00000528787 PPIP5K1Q6PFW1 1433 aa10.92□□□□□ -0.66
SSBP3-211ENST00000528787 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
SSBP3-211ENST00000528787 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
SSBP3-211ENST00000528787 UBAP1LF5GYI3 381 aa10.92□□□□□ -0.66
SSBP3-211ENST00000528787 ESCO1Q5FWF5 840 aa10.92□□□□□ -0.66
SSBP3-211ENST00000528787 NGDNQ8NEJ9 315 aaKnown RBP10.92□□□□□ -0.66
SSBP3-211ENST00000528787 TMC1Q8TDI8 760 aa10.92□□□□□ -0.66
SSBP3-211ENST00000528787 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
SSBP3-211ENST00000528787 CABP2Q9NPB3 220 aa10.91□□□□□ -0.66
SSBP3-211ENST00000528787 CCDC7Q96M83 1385 aa10.9□□□□□ -0.66
SSBP3-211ENST00000528787 DISP3Q9P2K9 1392 aa10.9□□□□□ -0.66
SSBP3-211ENST00000528787 RGPD8O14715 1765 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-211ENST00000528787 RBM33Q96EV2 1170 aaKnown RBP10.9□□□□□ -0.66
SSBP3-211ENST00000528787 POLR3GLQ9BT43 218 aa10.9□□□□□ -0.66
SSBP3-211ENST00000528787 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.67
SSBP3-211ENST00000528787 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.67
SSBP3-211ENST00000528787 KIF7Q2M1P5 1343 aa10.89□□□□□ -0.67
SSBP3-211ENST00000528787 WASHC2AQ641Q2 1341 aa10.88□□□□□ -0.67
SSBP3-211ENST00000528787 USP32Q8NFA0 1604 aa10.88□□□□□ -0.67
SSBP3-211ENST00000528787 AKAP12Q02952 1782 aa10.88□□□□□ -0.67
SSBP3-211ENST00000528787 CABP1Q9NZU7 370 aa10.88□□□□□ -0.67
SSBP3-211ENST00000528787 ROBO1Q9Y6N7 1651 aa10.88□□□□□ -0.67
SSBP3-211ENST00000528787 TTC21AQ8NDW8 1320 aa10.87□□□□□ -0.67
SSBP3-211ENST00000528787 SCAF1Q9H7N4 1312 aaKnown RBP10.87□□□□□ -0.67
SSBP3-211ENST00000528787 KTN1Q86UP2 1357 aaKnown RBP10.87□□□□□ -0.67
SSBP3-211ENST00000528787 NHSL1Q5SYE7 1610 aa10.87□□□□□ -0.67
SSBP3-211ENST00000528787 AHDC1Q5TGY3 1603 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-211ENST00000528787 EDC4Q6P2E9 1401 aaKnown RBP10.86□□□□□ -0.67
SSBP3-211ENST00000528787 NUTM2FA1L443 756 aa10.86□□□□□ -0.67
SSBP3-211ENST00000528787 BRINP3Q76B58 766 aa10.86□□□□□ -0.67
SSBP3-211ENST00000528787 LRRC59Q96AG4 307 aaKnown RBP10.86□□□□□ -0.67
SSBP3-211ENST00000528787 KNSTRNQ9Y448 316 aa10.86□□□□□ -0.67
SSBP3-211ENST00000528787 SBNO1A3KN83 1393 aa10.86□□□□□ -0.67
SSBP3-211ENST00000528787 ARHGEF10O15013 1369 aa10.86□□□□□ -0.67
SSBP3-211ENST00000528787 NSD2O96028 1365 aa10.86□□□□□ -0.67
SSBP3-211ENST00000528787 MON2Q7Z3U7 1717 aa10.86□□□□□ -0.67
SSBP3-211ENST00000528787 MYOM1P52179 1685 aa10.85□□□□□ -0.67
SSBP3-211ENST00000528787 ACEP12821 1306 aa10.85□□□□□ -0.67
SSBP3-211ENST00000528787 CGNL1Q0VF96 1302 aa10.85□□□□□ -0.67
SSBP3-211ENST00000528787 PRR36Q9H6K5 1346 aa10.85□□□□□ -0.67
SSBP3-211ENST00000528787 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
SSBP3-211ENST00000528787 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
SSBP3-211ENST00000528787 PHLPP1O60346 1717 aa10.84□□□□□ -0.67
SSBP3-211ENST00000528787 FOXO3O43524 673 aa10.84□□□□□ -0.67
SSBP3-211ENST00000528787 KRT28Q7Z3Y7 464 aa10.84□□□□□ -0.67
SSBP3-211ENST00000528787 FBXO41Q8TF61 875 aa10.84□□□□□ -0.67
SSBP3-211ENST00000528787 ORAI2Q96SN7 254 aa10.84□□□□□ -0.67
SSBP3-211ENST00000528787 SLC12A5Q9H2X9 1139 aa10.84□□□□□ -0.67
SSBP3-211ENST00000528787 USP6P35125 1406 aa10.84□□□□□ -0.67
SSBP3-211ENST00000528787 PMFBP1Q8TBY8 1022 aa10.83□□□□□ -0.68
SSBP3-211ENST00000528787 SOS2Q07890 1332 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-211ENST00000528787 A0A1W2PP64 1363 aa10.82□□□□□ -0.68
SSBP3-211ENST00000528787 NPC1L1Q9UHC9 1359 aa10.82□□□□□ -0.68
SSBP3-211ENST00000528787 PAK3O75914 559 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms