RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
SIPA1-204ENST00000528699 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
SIPA1-204ENST00000528699 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
SIPA1-204ENST00000528699 C14orf93Q9H972 538 aaKnown RBP15.88■□□□□ 0.13
SIPA1-204ENST00000528699 STK26Q9P289 416 aa15.87■□□□□ 0.13
SIPA1-204ENST00000528699 WAPLQ7Z5K2 1190 aa15.86■□□□□ 0.13
SIPA1-204ENST00000528699 ADGRB1O14514 1584 aa15.86■□□□□ 0.13
SIPA1-204ENST00000528699 SOS2Q07890 1332 aaPredicted RBP15.86■□□□□ 0.13
SIPA1-204ENST00000528699 FMN2Q9NZ56 1722 aa15.85■□□□□ 0.13
SIPA1-204ENST00000528699 MEX3CQ5U5Q3 659 aaKnown RBP15.85■□□□□ 0.13
SIPA1-204ENST00000528699 SIRT1Q96EB6 747 aa15.85■□□□□ 0.13
SIPA1-204ENST00000528699 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
SIPA1-204ENST00000528699 PXDNQ92626 1479 aa15.84■□□□□ 0.13
SIPA1-204ENST00000528699 DLC1Q96QB1 1528 aa15.84■□□□□ 0.13
SIPA1-204ENST00000528699 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.13
SIPA1-204ENST00000528699 NUTM2BA6NNL0 878 aaPredicted RBP15.82■□□□□ 0.12
SIPA1-204ENST00000528699 NUTM2EB1AL46 878 aaPredicted RBP15.82■□□□□ 0.12
SIPA1-204ENST00000528699 ZNF772Q68DY9 489 aaPredicted RBP15.82■□□□□ 0.12
SIPA1-204ENST00000528699 NUTM2AQ8IVF1 878 aaPredicted RBP15.82■□□□□ 0.12
SIPA1-204ENST00000528699 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
SIPA1-204ENST00000528699 KIF1AQ12756 1690 aa15.8■□□□□ 0.12
SIPA1-204ENST00000528699 NPHP3Q7Z494 1330 aa15.8■□□□□ 0.12
SIPA1-204ENST00000528699 ESCO1Q5FWF5 840 aa15.8■□□□□ 0.12
SIPA1-204ENST00000528699 ADGRB2O60241 1585 aa15.79■□□□□ 0.12
SIPA1-204ENST00000528699 AFF2P51816 1311 aa15.78■□□□□ 0.12
SIPA1-204ENST00000528699 DCAF11Q8TEB1 546 aa15.77■□□□□ 0.12
SIPA1-204ENST00000528699 PRAM1Q96QH2 718 aa15.77■□□□□ 0.12
SIPA1-204ENST00000528699 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
SIPA1-204ENST00000528699 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
SIPA1-204ENST00000528699 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
SIPA1-204ENST00000528699 USP32Q8NFA0 1604 aa15.76■□□□□ 0.11
SIPA1-204ENST00000528699 FOXO3O43524 673 aa15.75■□□□□ 0.11
SIPA1-204ENST00000528699 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
SIPA1-204ENST00000528699 RGPD8O14715 1765 aaPredicted RBP15.74■□□□□ 0.11
SIPA1-204ENST00000528699 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
SIPA1-204ENST00000528699 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
SIPA1-204ENST00000528699 ANKARQ7Z5J8 1434 aa15.73■□□□□ 0.11
SIPA1-204ENST00000528699 ARHGEF28Q8N1W1 1705 aaKnown RBP15.72■□□□□ 0.11
SIPA1-204ENST00000528699 ADAMTS2O95450 1211 aa15.72■□□□□ 0.11
SIPA1-204ENST00000528699 RXRBP28702 533 aa15.72■□□□□ 0.11
SIPA1-204ENST00000528699 SAFB2Q14151 953 aaKnown RBP eCLIP15.72■□□□□ 0.11
SIPA1-204ENST00000528699 MARF1Q9Y4F3 1742 aaKnown RBP15.71■□□□□ 0.11
SIPA1-204ENST00000528699 POGKQ9P215 609 aa15.71■□□□□ 0.11
SIPA1-204ENST00000528699 TRAK1Q9UPV9 953 aa15.71■□□□□ 0.11
SIPA1-204ENST00000528699 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.1
SIPA1-204ENST00000528699 PHF8Q9UPP1 1060 aa15.7■□□□□ 0.1
SIPA1-204ENST00000528699 SPATA31A3Q5VYP0 1347 aa15.69■□□□□ 0.1
SIPA1-204ENST00000528699 RGS12O14924 1447 aa15.69■□□□□ 0.1
SIPA1-204ENST00000528699 TULP4Q9NRJ4 1543 aa15.69■□□□□ 0.1
SIPA1-204ENST00000528699 NGLY1Q96IV0 654 aa15.69■□□□□ 0.1
SIPA1-204ENST00000528699 TNS3Q68CZ2 1445 aa15.68■□□□□ 0.1
SIPA1-204ENST00000528699 FNBP4Q8N3X1 1017 aaPredicted RBP15.68■□□□□ 0.1
SIPA1-204ENST00000528699 QTRT2Q9H974 415 aaKnown RBP15.68■□□□□ 0.1
SIPA1-204ENST00000528699 EIF3AQ14152 1382 aaKnown RBP15.67■□□□□ 0.1
SIPA1-204ENST00000528699 RBM6P78332 1123 aaKnown RBP15.67■□□□□ 0.1
SIPA1-204ENST00000528699 KRT28Q7Z3Y7 464 aa15.67■□□□□ 0.1
SIPA1-204ENST00000528699 ATRNO75882 1429 aa15.67■□□□□ 0.1
SIPA1-204ENST00000528699 BCL9LQ86UU0 1499 aa15.66■□□□□ 0.1
SIPA1-204ENST00000528699 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
SIPA1-204ENST00000528699 HIRIP3Q9BW71 556 aaPredicted RBP15.66■□□□□ 0.1
SIPA1-204ENST00000528699 MINK1Q8N4C8 1332 aaPredicted RBP15.66■□□□□ 0.1
SIPA1-204ENST00000528699 PRR36Q9H6K5 1346 aa15.66■□□□□ 0.1
SIPA1-204ENST00000528699 ABCA3Q99758 1704 aa15.65■□□□□ 0.1
SIPA1-204ENST00000528699 TRPM3Q9HCF6 1732 aaPredicted RBP15.65■□□□□ 0.1
SIPA1-204ENST00000528699 USP21Q9UK80 565 aa15.65■□□□□ 0.1
SIPA1-204ENST00000528699 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.65■□□□□ 0.1
SIPA1-204ENST00000528699 WASLO00401 505 aaPredicted RBP15.64■□□□□ 0.09
SIPA1-204ENST00000528699 ATP7BP35670 1465 aa15.64■□□□□ 0.09
SIPA1-204ENST00000528699 SLIT2O94813 1529 aa15.63■□□□□ 0.09
SIPA1-204ENST00000528699 PSME1Q06323 249 aa15.63■□□□□ 0.09
SIPA1-204ENST00000528699 TRPC5Q9UL62 973 aaPredicted RBP15.63■□□□□ 0.09
SIPA1-204ENST00000528699 ARHGEF10O15013 1369 aa15.62■□□□□ 0.09
SIPA1-204ENST00000528699 PMFBP1Q8TBY8 1022 aa15.62■□□□□ 0.09
SIPA1-204ENST00000528699 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.09
SIPA1-204ENST00000528699 ALS2Q96Q42 1657 aa15.62■□□□□ 0.09
SIPA1-204ENST00000528699 ITSN1Q15811 1721 aa15.62■□□□□ 0.09
SIPA1-204ENST00000528699 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
SIPA1-204ENST00000528699 TRIM26Q12899 539 aaPredicted RBP15.59■□□□□ 0.09
SIPA1-204ENST00000528699 NBPF1Q3BBV0 1214 aa15.59■□□□□ 0.09
SIPA1-204ENST00000528699 PLCH1Q4KWH8 1693 aa15.59■□□□□ 0.09
SIPA1-204ENST00000528699 CRYBG1Q9Y4K1 1723 aa15.58■□□□□ 0.08
SIPA1-204ENST00000528699 GLI3P10071 1580 aa15.58■□□□□ 0.08
SIPA1-204ENST00000528699 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
SIPA1-204ENST00000528699 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
SIPA1-204ENST00000528699 GPRASP1Q5JY77 1395 aa15.57■□□□□ 0.08
SIPA1-204ENST00000528699 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
SIPA1-204ENST00000528699 L3MBTL2Q969R5 705 aa15.56■□□□□ 0.08
SIPA1-204ENST00000528699 NUDT16Q96DE0 195 aaKnown RBP15.56■□□□□ 0.08
SIPA1-204ENST00000528699 RALGAPBQ86X10 1494 aa15.56■□□□□ 0.08
SIPA1-204ENST00000528699 TRPM1Q7Z4N2 1603 aa15.56■□□□□ 0.08
SIPA1-204ENST00000528699 GJD4Q96KN9 370 aaPredicted RBP15.55■□□□□ 0.08
SIPA1-204ENST00000528699 CDK19Q9BWU1 502 aa15.55■□□□□ 0.08
SIPA1-204ENST00000528699 POLR3AO14802 1390 aaPredicted RBP15.54■□□□□ 0.08
SIPA1-204ENST00000528699 EP400Q96L91 3159 aa15.54■□□□□ 0.08
SIPA1-204ENST00000528699 HAP1P54257 671 aaPredicted RBP15.54■□□□□ 0.08
SIPA1-204ENST00000528699 LMOD2Q6P5Q4 547 aa15.54■□□□□ 0.08
SIPA1-204ENST00000528699 SIN3AQ96ST3 1273 aa15.54■□□□□ 0.08
SIPA1-204ENST00000528699 QRICH2Q9H0J4 1663 aa15.54■□□□□ 0.08
SIPA1-204ENST00000528699 ATAD2Q6PL18 1390 aa15.53■□□□□ 0.08
SIPA1-204ENST00000528699 CENPJQ9HC77 1338 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms