RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 FAM161AQ3B820 660 aa24.47■■□□□ 1.51
TM9SF1-206ENST00000528669 DDRGK1Q96HY6 314 aa24.47■■□□□ 1.51
TM9SF1-206ENST00000528669 NEFMP07197 916 aa24.46■■□□□ 1.51
TM9SF1-206ENST00000528669 NGEFQ8N5V2 710 aa24.46■■□□□ 1.51
TM9SF1-206ENST00000528669 SLC4A3P48751 1232 aa24.44■■□□□ 1.5
TM9SF1-206ENST00000528669 MLH3Q9UHC1 1453 aa24.44■■□□□ 1.5
TM9SF1-206ENST00000528669 CANXP27824 592 aaKnown RBP24.43■■□□□ 1.5
TM9SF1-206ENST00000528669 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
TM9SF1-206ENST00000528669 IGHDP01880 384 aa24.43■■□□□ 1.5
TM9SF1-206ENST00000528669 PANK1Q8TE04 598 aa24.43■■□□□ 1.5
TM9SF1-206ENST00000528669 MTHFSP49914 203 aa24.42■■□□□ 1.5
TM9SF1-206ENST00000528669 RUNDC1Q96C34 613 aa24.42■■□□□ 1.5
TM9SF1-206ENST00000528669 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
TM9SF1-206ENST00000528669 ABCC3O15438 1527 aa24.42■■□□□ 1.5
TM9SF1-206ENST00000528669 TCP11L2Q8N4U5 519 aa24.42■■□□□ 1.5
TM9SF1-206ENST00000528669 COG6Q9Y2V7 657 aa24.41■■□□□ 1.5
TM9SF1-206ENST00000528669 RPGRIP1LQ68CZ1 1315 aa24.41■■□□□ 1.5
TM9SF1-206ENST00000528669 RAPGEF3O95398 923 aa24.4■■□□□ 1.5
TM9SF1-206ENST00000528669 FRAT1Q92837 279 aaPredicted RBP24.4■■□□□ 1.5
TM9SF1-206ENST00000528669 CFAP74Q9C0B2 1584 aa24.4■■□□□ 1.5
TM9SF1-206ENST00000528669 SIGLEC1Q9BZZ2 1709 aa24.39■■□□□ 1.5
TM9SF1-206ENST00000528669 CGNL1Q0VF96 1302 aa24.39■■□□□ 1.5
TM9SF1-206ENST00000528669 PDE3AQ14432 1141 aa24.39■■□□□ 1.5
TM9SF1-206ENST00000528669 GLI2P10070 1586 aa24.38■■□□□ 1.49
TM9SF1-206ENST00000528669 PPM1GO15355 546 aaPredicted RBP24.38■■□□□ 1.49
TM9SF1-206ENST00000528669 SAFB2Q14151 953 aaKnown RBP eCLIP24.38■■□□□ 1.49
TM9SF1-206ENST00000528669 CAMSAP1Q5T5Y3 1602 aa24.37■■□□□ 1.49
TM9SF1-206ENST00000528669 IQSEC2Q5JU85 1478 aa24.36■■□□□ 1.49
TM9SF1-206ENST00000528669 CABP2Q9NPB3 220 aa24.36■■□□□ 1.49
TM9SF1-206ENST00000528669 EVC2Q86UK5 1308 aa24.36■■□□□ 1.49
TM9SF1-206ENST00000528669 CLUAP1Q96AJ1 413 aa24.35■■□□□ 1.49
TM9SF1-206ENST00000528669 TULP4Q9NRJ4 1543 aa24.34■■□□□ 1.49
TM9SF1-206ENST00000528669 CFAP53Q96M91 514 aa24.34■■□□□ 1.49
TM9SF1-206ENST00000528669 USP32Q8NFA0 1604 aa24.34■■□□□ 1.49
TM9SF1-206ENST00000528669 RARSP54136 660 aaKnown RBP24.34■■□□□ 1.49
TM9SF1-206ENST00000528669 ARHGEF28Q8N1W1 1705 aaKnown RBP24.34■■□□□ 1.49
TM9SF1-206ENST00000528669 VGFO15240 615 aaPredicted RBP24.33■■□□□ 1.49
TM9SF1-206ENST00000528669 BCL2L13Q9BXK5 485 aa24.33■■□□□ 1.49
TM9SF1-206ENST00000528669 USP35Q9P2H5 1018 aa24.33■■□□□ 1.49
TM9SF1-206ENST00000528669 DAXXQ9UER7 740 aaPredicted RBP24.33■■□□□ 1.48
TM9SF1-206ENST00000528669 TNNQ9UQP3 1299 aa24.33■■□□□ 1.48
TM9SF1-206ENST00000528669 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
TM9SF1-206ENST00000528669 NINLQ9Y2I6 1382 aa24.32■■□□□ 1.48
TM9SF1-206ENST00000528669 NEXMIFQ5QGS0 1516 aa24.32■■□□□ 1.48
TM9SF1-206ENST00000528669 ANKRD36BQ8N2N9 1353 aa24.31■■□□□ 1.48
TM9SF1-206ENST00000528669 STK26Q9P289 416 aa24.31■■□□□ 1.48
TM9SF1-206ENST00000528669 U2AF1L5P0DN76 240 aaPredicted RBP24.3■■□□□ 1.48
TM9SF1-206ENST00000528669 U2AF1Q01081 240 aaKnown RBP eCLIP24.3■■□□□ 1.48
TM9SF1-206ENST00000528669 WDR63Q8IWG1 891 aa24.3■■□□□ 1.48
TM9SF1-206ENST00000528669 OSCARQ8IYS5 282 aa24.3■■□□□ 1.48
TM9SF1-206ENST00000528669 PIK3C2BO00750 1634 aa24.29■■□□□ 1.48
TM9SF1-206ENST00000528669 IDI1Q13907 227 aa24.29■■□□□ 1.48
TM9SF1-206ENST00000528669 RLBP1P12271 317 aa24.29■■□□□ 1.48
TM9SF1-206ENST00000528669 PUS7Q96PZ0 661 aaKnown RBP24.25■■□□□ 1.47
TM9SF1-206ENST00000528669 CCDC27Q2M243 656 aa24.25■■□□□ 1.47
TM9SF1-206ENST00000528669 DIP2CQ9Y2E4 1556 aa24.25■■□□□ 1.47
TM9SF1-206ENST00000528669 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
TM9SF1-206ENST00000528669 NFKBIBQ15653 356 aa24.24■■□□□ 1.47
TM9SF1-206ENST00000528669 NSD2O96028 1365 aa24.24■■□□□ 1.47
TM9SF1-206ENST00000528669 PCDHB15Q9Y5E8 787 aa24.23■■□□□ 1.47
TM9SF1-206ENST00000528669 A0A1W2PP64 1363 aa24.23■■□□□ 1.47
TM9SF1-206ENST00000528669 GGNBP2Q9H3C7 697 aa24.23■■□□□ 1.47
TM9SF1-206ENST00000528669 VIRMAQ69YN4 1812 aaKnown RBP24.22■■□□□ 1.47
TM9SF1-206ENST00000528669 MYH16Q9H6N6 1097 aa24.21■■□□□ 1.47
TM9SF1-206ENST00000528669 NEO1Q92859 1461 aa24.21■■□□□ 1.47
TM9SF1-206ENST00000528669 MYO5BQ9ULV0 1848 aa24.21■■□□□ 1.47
TM9SF1-206ENST00000528669 MAPK8IP3Q9UPT6 1336 aa24.21■■□□□ 1.47
TM9SF1-206ENST00000528669 SEC24BO95487 1268 aa24.21■■□□□ 1.47
TM9SF1-206ENST00000528669 U2SURPO15042 1029 aaKnown RBP24.2■■□□□ 1.46
TM9SF1-206ENST00000528669 USP19O94966 1318 aa24.19■■□□□ 1.46
TM9SF1-206ENST00000528669 MINK1Q8N4C8 1332 aaPredicted RBP24.19■■□□□ 1.46
TM9SF1-206ENST00000528669 PMFBP1Q8TBY8 1022 aa24.19■■□□□ 1.46
TM9SF1-206ENST00000528669 TSR2Q969E8 191 aaKnown RBP24.19■■□□□ 1.46
TM9SF1-206ENST00000528669 ARHGAP31Q2M1Z3 1444 aa24.18■■□□□ 1.46
TM9SF1-206ENST00000528669 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
TM9SF1-206ENST00000528669 ABCC11Q96J66 1382 aa24.17■■□□□ 1.46
TM9SF1-206ENST00000528669 ADGRB2O60241 1585 aa24.16■■□□□ 1.46
TM9SF1-206ENST00000528669 SLC52A1Q9NWF4 448 aa24.16■■□□□ 1.46
TM9SF1-206ENST00000528669 PRAM1Q96QH2 718 aa24.15■■□□□ 1.46
TM9SF1-206ENST00000528669 PDZRN3Q9UPQ7 1066 aa24.14■■□□□ 1.45
TM9SF1-206ENST00000528669 RICTORQ6R327 1708 aa24.14■■□□□ 1.45
TM9SF1-206ENST00000528669 PLEKHF1Q96S99 279 aa24.13■■□□□ 1.45
TM9SF1-206ENST00000528669 POGKQ9P215 609 aa24.13■■□□□ 1.45
TM9SF1-206ENST00000528669 ZFYVE9O95405 1425 aa24.13■■□□□ 1.45
TM9SF1-206ENST00000528669 FYB1O15117 783 aa24.13■■□□□ 1.45
TM9SF1-206ENST00000528669 PTPRMP28827 1452 aa24.12■■□□□ 1.45
TM9SF1-206ENST00000528669 TMPOP42166 694 aaKnown RBP24.12■■□□□ 1.45
TM9SF1-206ENST00000528669 EXOSC9Q06265 439 aaKnown RBP24.12■■□□□ 1.45
TM9SF1-206ENST00000528669 AAMPQ13685 434 aa24.12■■□□□ 1.45
TM9SF1-206ENST00000528669 MVPQ14764 893 aaKnown RBP24.11■■□□□ 1.45
TM9SF1-206ENST00000528669 NCBP3Q53F19 620 aaKnown RBP24.11■■□□□ 1.45
TM9SF1-206ENST00000528669 ZKSCAN2Q63HK3 967 aa24.11■■□□□ 1.45
TM9SF1-206ENST00000528669 FBXO31Q5XUX0 539 aaPredicted RBP24.11■■□□□ 1.45
TM9SF1-206ENST00000528669 FTSJ3Q8IY81 847 aaKnown RBP24.11■■□□□ 1.45
TM9SF1-206ENST00000528669 TRIM35Q9UPQ4 493 aa24.11■■□□□ 1.45
TM9SF1-206ENST00000528669 TMEM131LA2VDJ0 1609 aa24.1■■□□□ 1.45
TM9SF1-206ENST00000528669 PREX1Q8TCU6 1659 aa24.1■■□□□ 1.45
TM9SF1-206ENST00000528669 RWDD1Q9H446 243 aaPredicted RBP24.1■■□□□ 1.45
TM9SF1-206ENST00000528669 SMC4Q9NTJ3 1288 aa24.1■■□□□ 1.45
TM9SF1-206ENST00000528669 TERF2IPQ9NYB0 399 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms