RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 CDC42BPGQ6DT37 1551 aa33.85■■■■□ 3.01
PKP3-206ENST00000528036 ZNF772Q68DY9 489 aaPredicted RBP33.85■■■■□ 3.01
PKP3-206ENST00000528036 LAMC1P11047 1609 aa33.85■■■■□ 3.01
PKP3-206ENST00000528036 WAPLQ7Z5K2 1190 aa33.84■■■■□ 3.01
PKP3-206ENST00000528036 CFAP70Q5T0N1 1121 aa33.83■■■■□ 3.01
PKP3-206ENST00000528036 POTEAQ6S8J7 498 aa33.83■■■■□ 3.01
PKP3-206ENST00000528036 ORAI2Q96SN7 254 aa33.83■■■■□ 3.01
PKP3-206ENST00000528036 KNDC1Q76NI1 1749 aa33.82■■■■□ 3
PKP3-206ENST00000528036 SOS2Q07890 1332 aaPredicted RBP33.81■■■■□ 3
PKP3-206ENST00000528036 NPHP3Q7Z494 1330 aa33.79■■■■□ 3
PKP3-206ENST00000528036 LRP6O75581 1613 aa33.79■■■■□ 3
PKP3-206ENST00000528036 ESCO1Q5FWF5 840 aa33.79■■■■□ 3
PKP3-206ENST00000528036 NUTM2BA6NNL0 878 aaPredicted RBP33.77■■■■□ 3
PKP3-206ENST00000528036 NUTM2EB1AL46 878 aaPredicted RBP33.77■■■■□ 3
PKP3-206ENST00000528036 NUTM2AQ8IVF1 878 aaPredicted RBP33.77■■■■□ 3
PKP3-206ENST00000528036 DCAF11Q8TEB1 546 aa33.77■■■■□ 3
PKP3-206ENST00000528036 DDX17Q92841 729 aaKnown RBP33.77■■■■□ 3
PKP3-206ENST00000528036 PNPLA6Q8IY17 1366 aa33.76■■■■□ 3
PKP3-206ENST00000528036 PLEKHH1Q9ULM0 1364 aa33.73■■■□□ 2.99
PKP3-206ENST00000528036 KDM2AQ9Y2K7 1162 aa33.71■■■□□ 2.99
PKP3-206ENST00000528036 DLC1Q96QB1 1528 aa33.7■■■□□ 2.99
PKP3-206ENST00000528036 POGKQ9P215 609 aa33.7■■■□□ 2.99
PKP3-206ENST00000528036 PRAM1Q96QH2 718 aa33.68■■■□□ 2.98
PKP3-206ENST00000528036 FOXO3O43524 673 aa33.65■■■□□ 2.98
PKP3-206ENST00000528036 AFF2P51816 1311 aa33.62■■■□□ 2.97
PKP3-206ENST00000528036 NUTM2FA1L443 756 aa33.62■■■□□ 2.97
PKP3-206ENST00000528036 ADGRB1O14514 1584 aa33.62■■■□□ 2.97
PKP3-206ENST00000528036 RXRBP28702 533 aa33.6■■■□□ 2.97
PKP3-206ENST00000528036 C8orf37Q96NL8 207 aa33.59■■■□□ 2.97
PKP3-206ENST00000528036 TRAK1Q9UPV9 953 aa33.59■■■□□ 2.97
PKP3-206ENST00000528036 FMN2Q9NZ56 1722 aa33.59■■■□□ 2.97
PKP3-206ENST00000528036 EIF3AQ14152 1382 aaKnown RBP33.59■■■□□ 2.97
PKP3-206ENST00000528036 PXDNQ92626 1479 aa33.58■■■□□ 2.97
PKP3-206ENST00000528036 NGLY1Q96IV0 654 aa33.57■■■□□ 2.96
PKP3-206ENST00000528036 PHF8Q9UPP1 1060 aa33.57■■■□□ 2.96
PKP3-206ENST00000528036 KIF1AQ12756 1690 aa33.56■■■□□ 2.96
PKP3-206ENST00000528036 PSME1Q06323 249 aa33.56■■■□□ 2.96
PKP3-206ENST00000528036 SAFB2Q14151 953 aaKnown RBP eCLIP33.56■■■□□ 2.96
PKP3-206ENST00000528036 ANKARQ7Z5J8 1434 aa33.55■■■□□ 2.96
PKP3-206ENST00000528036 ADAMTS2O95450 1211 aa33.54■■■□□ 2.96
PKP3-206ENST00000528036 KRT28Q7Z3Y7 464 aa33.52■■■□□ 2.96
PKP3-206ENST00000528036 COL22A1Q8NFW1 1626 aaPredicted RBP33.52■■■□□ 2.96
PKP3-206ENST00000528036 CDK12Q9NYV4 1490 aaPredicted RBP33.51■■■□□ 2.96
PKP3-206ENST00000528036 QTRT2Q9H974 415 aaKnown RBP33.5■■■□□ 2.95
PKP3-206ENST00000528036 ADGRB2O60241 1585 aa33.5■■■□□ 2.95
PKP3-206ENST00000528036 SPATA31A3Q5VYP0 1347 aa33.5■■■□□ 2.95
PKP3-206ENST00000528036 XPCQ01831 940 aaPredicted RBP33.49■■■□□ 2.95
PKP3-206ENST00000528036 RBM6P78332 1123 aaKnown RBP33.48■■■□□ 2.95
PKP3-206ENST00000528036 FNBP4Q8N3X1 1017 aaPredicted RBP33.48■■■□□ 2.95
PKP3-206ENST00000528036 WASLO00401 505 aaPredicted RBP33.45■■■□□ 2.95
PKP3-206ENST00000528036 SBNO1A3KN83 1393 aa33.45■■■□□ 2.94
PKP3-206ENST00000528036 USP21Q9UK80 565 aa33.44■■■□□ 2.94
PKP3-206ENST00000528036 MINK1Q8N4C8 1332 aaPredicted RBP33.44■■■□□ 2.94
PKP3-206ENST00000528036 TRPC5Q9UL62 973 aaPredicted RBP33.43■■■□□ 2.94
PKP3-206ENST00000528036 HIRIP3Q9BW71 556 aaPredicted RBP33.41■■■□□ 2.94
PKP3-206ENST00000528036 ARHGEF10O15013 1369 aa33.4■■■□□ 2.94
PKP3-206ENST00000528036 KIAA1210Q9ULL0 1709 aa33.39■■■□□ 2.94
PKP3-206ENST00000528036 TNS3Q68CZ2 1445 aa33.39■■■□□ 2.94
PKP3-206ENST00000528036 GPRASP1Q5JY77 1395 aa33.37■■■□□ 2.93
PKP3-206ENST00000528036 TULP4Q9NRJ4 1543 aa33.37■■■□□ 2.93
PKP3-206ENST00000528036 PMFBP1Q8TBY8 1022 aa33.35■■■□□ 2.93
PKP3-206ENST00000528036 HAP1P54257 671 aaPredicted RBP33.33■■■□□ 2.93
PKP3-206ENST00000528036 RGPD8O14715 1765 aaPredicted RBP33.3■■■□□ 2.92
PKP3-206ENST00000528036 NGDNQ8NEJ9 315 aaKnown RBP33.3■■■□□ 2.92
PKP3-206ENST00000528036 L3MBTL2Q969R5 705 aa33.3■■■□□ 2.92
PKP3-206ENST00000528036 PRR36Q9H6K5 1346 aa33.29■■■□□ 2.92
PKP3-206ENST00000528036 USP32Q8NFA0 1604 aa33.29■■■□□ 2.92
PKP3-206ENST00000528036 LMOD2Q6P5Q4 547 aa33.29■■■□□ 2.92
PKP3-206ENST00000528036 ATRNO75882 1429 aa33.28■■■□□ 2.92
PKP3-206ENST00000528036 ARHGEF28Q8N1W1 1705 aaKnown RBP33.28■■■□□ 2.92
PKP3-206ENST00000528036 NBPF1Q3BBV0 1214 aa33.28■■■□□ 2.92
PKP3-206ENST00000528036 NUDT16Q96DE0 195 aaKnown RBP33.27■■■□□ 2.92
PKP3-206ENST00000528036 BCL9LQ86UU0 1499 aa33.25■■■□□ 2.91
PKP3-206ENST00000528036 UPF1Q92900 1129 aaKnown RBP eCLIP33.25■■■□□ 2.91
PKP3-206ENST00000528036 CDK19Q9BWU1 502 aa33.25■■■□□ 2.91
PKP3-206ENST00000528036 UNC5CLQ8IV45 518 aa33.24■■■□□ 2.91
PKP3-206ENST00000528036 RGS12O14924 1447 aa33.23■■■□□ 2.91
PKP3-206ENST00000528036 CCDC61Q9Y6R9 512 aa33.23■■■□□ 2.91
PKP3-206ENST00000528036 MARF1Q9Y4F3 1742 aaKnown RBP33.22■■■□□ 2.91
PKP3-206ENST00000528036 SIN3AQ96ST3 1273 aa33.22■■■□□ 2.91
PKP3-206ENST00000528036 CENPJQ9HC77 1338 aaPredicted RBP33.22■■■□□ 2.91
PKP3-206ENST00000528036 SLIT2O94813 1529 aa33.2■■■□□ 2.91
PKP3-206ENST00000528036 NEUROD1Q13562 356 aa33.2■■■□□ 2.91
PKP3-206ENST00000528036 GJD4Q96KN9 370 aaPredicted RBP33.2■■■□□ 2.91
PKP3-206ENST00000528036 ATP7BP35670 1465 aa33.19■■■□□ 2.9
PKP3-206ENST00000528036 CABLES1Q8TDN4 633 aa33.17■■■□□ 2.9
PKP3-206ENST00000528036 PLEKHG3A1L390 1219 aa33.16■■■□□ 2.9
PKP3-206ENST00000528036 ITSN1Q15811 1721 aa33.16■■■□□ 2.9
PKP3-206ENST00000528036 TRIM26Q12899 539 aaPredicted RBP33.15■■■□□ 2.9
PKP3-206ENST00000528036 ATAD2Q6PL18 1390 aa33.14■■■□□ 2.9
PKP3-206ENST00000528036 PAK3O75914 559 aaPredicted RBP33.14■■■□□ 2.9
PKP3-206ENST00000528036 POLR3AO14802 1390 aaPredicted RBP33.12■■■□□ 2.89
PKP3-206ENST00000528036 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.12■■■□□ 2.89
PKP3-206ENST00000528036 SRPK2P78362 688 aaKnown RBP33.12■■■□□ 2.89
PKP3-206ENST00000528036 TRPM3Q9HCF6 1732 aaPredicted RBP33.11■■■□□ 2.89
PKP3-206ENST00000528036 VPS72Q15906 364 aa33.1■■■□□ 2.89
PKP3-206ENST00000528036 NBPF8Q3BBV2 869 aa33.09■■■□□ 2.89
PKP3-206ENST00000528036 ROCK2O75116 1388 aaKnown RBP33.09■■■□□ 2.89
PKP3-206ENST00000528036 ACEP12821 1306 aa33.08■■■□□ 2.89
PKP3-206ENST00000528036 PLEKHG5O94827 1062 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms