RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 TECPR2O15040 1411 aa22.38■■□□□ 1.17
EXOSC4-203ENST00000527954 PNPLA6Q8IY17 1366 aa22.38■■□□□ 1.17
EXOSC4-203ENST00000527954 CFAP70Q5T0N1 1121 aa22.36■■□□□ 1.17
EXOSC4-203ENST00000527954 C14orf93Q9H972 538 aaKnown RBP22.36■■□□□ 1.17
EXOSC4-203ENST00000527954 PLEKHH1Q9ULM0 1364 aa22.36■■□□□ 1.17
EXOSC4-203ENST00000527954 YTHDC2Q9H6S0 1430 aaKnown RBP22.35■■□□□ 1.17
EXOSC4-203ENST00000527954 ESCO1Q5FWF5 840 aa22.35■■□□□ 1.17
EXOSC4-203ENST00000527954 SOS2Q07890 1332 aaPredicted RBP22.34■■□□□ 1.17
EXOSC4-203ENST00000527954 CDC42BPGQ6DT37 1551 aa22.34■■□□□ 1.17
EXOSC4-203ENST00000527954 NUTM2FA1L443 756 aa22.34■■□□□ 1.17
EXOSC4-203ENST00000527954 MYOM2P54296 1465 aa22.33■■□□□ 1.16
EXOSC4-203ENST00000527954 NRXN1Q9ULB1 1477 aa22.33■■□□□ 1.16
EXOSC4-203ENST00000527954 LAMC1P11047 1609 aa22.32■■□□□ 1.16
EXOSC4-203ENST00000527954 AFF2P51816 1311 aa22.31■■□□□ 1.16
EXOSC4-203ENST00000527954 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
EXOSC4-203ENST00000527954 HRCP23327 699 aa22.3■■□□□ 1.16
EXOSC4-203ENST00000527954 C8orf37Q96NL8 207 aa22.3■■□□□ 1.16
EXOSC4-203ENST00000527954 KNDC1Q76NI1 1749 aa22.3■■□□□ 1.16
EXOSC4-203ENST00000527954 SIRT1Q96EB6 747 aa22.29■■□□□ 1.16
EXOSC4-203ENST00000527954 ADAMTS2O95450 1211 aa22.28■■□□□ 1.16
EXOSC4-203ENST00000527954 NPHP3Q7Z494 1330 aa22.28■■□□□ 1.16
EXOSC4-203ENST00000527954 FOXO3O43524 673 aa22.27■■□□□ 1.16
EXOSC4-203ENST00000527954 RXRBP28702 533 aa22.27■■□□□ 1.16
EXOSC4-203ENST00000527954 KDM2AQ9Y2K7 1162 aa22.27■■□□□ 1.16
EXOSC4-203ENST00000527954 XPCQ01831 940 aaPredicted RBP22.26■■□□□ 1.15
EXOSC4-203ENST00000527954 SAFB2Q14151 953 aaKnown RBP eCLIP22.25■■□□□ 1.15
EXOSC4-203ENST00000527954 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
EXOSC4-203ENST00000527954 PRAM1Q96QH2 718 aa22.25■■□□□ 1.15
EXOSC4-203ENST00000527954 NGLY1Q96IV0 654 aa22.24■■□□□ 1.15
EXOSC4-203ENST00000527954 PXDNQ92626 1479 aa22.23■■□□□ 1.15
EXOSC4-203ENST00000527954 FMN2Q9NZ56 1722 aa22.22■■□□□ 1.15
EXOSC4-203ENST00000527954 QTRT2Q9H974 415 aaKnown RBP22.21■■□□□ 1.15
EXOSC4-203ENST00000527954 POGKQ9P215 609 aa22.21■■□□□ 1.15
EXOSC4-203ENST00000527954 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
EXOSC4-203ENST00000527954 ADGRB1O14514 1584 aa22.18■■□□□ 1.14
EXOSC4-203ENST00000527954 COL22A1Q8NFW1 1626 aaPredicted RBP22.17■■□□□ 1.14
EXOSC4-203ENST00000527954 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
EXOSC4-203ENST00000527954 RBM6P78332 1123 aaKnown RBP22.16■■□□□ 1.14
EXOSC4-203ENST00000527954 KRT28Q7Z3Y7 464 aa22.16■■□□□ 1.14
EXOSC4-203ENST00000527954 STAC3Q96MF2 364 aa22.16■■□□□ 1.14
EXOSC4-203ENST00000527954 PHF8Q9UPP1 1060 aa22.16■■□□□ 1.14
EXOSC4-203ENST00000527954 CDK12Q9NYV4 1490 aaPredicted RBP22.15■■□□□ 1.14
EXOSC4-203ENST00000527954 USP21Q9UK80 565 aa22.15■■□□□ 1.14
EXOSC4-203ENST00000527954 SPATA31A3Q5VYP0 1347 aa22.14■■□□□ 1.14
EXOSC4-203ENST00000527954 KIF1AQ12756 1690 aa22.14■■□□□ 1.13
EXOSC4-203ENST00000527954 FNBP4Q8N3X1 1017 aaPredicted RBP22.13■■□□□ 1.13
EXOSC4-203ENST00000527954 HIRIP3Q9BW71 556 aaPredicted RBP22.13■■□□□ 1.13
EXOSC4-203ENST00000527954 UPF1Q92900 1129 aaKnown RBP eCLIP22.12■■□□□ 1.13
EXOSC4-203ENST00000527954 MINK1Q8N4C8 1332 aaPredicted RBP22.11■■□□□ 1.13
EXOSC4-203ENST00000527954 RGPD8O14715 1765 aaPredicted RBP22.1■■□□□ 1.13
EXOSC4-203ENST00000527954 RGS12O14924 1447 aa22.1■■□□□ 1.13
EXOSC4-203ENST00000527954 PSME1Q06323 249 aa22.09■■□□□ 1.13
EXOSC4-203ENST00000527954 PMFBP1Q8TBY8 1022 aa22.09■■□□□ 1.13
EXOSC4-203ENST00000527954 TRPC5Q9UL62 973 aaPredicted RBP22.09■■□□□ 1.13
EXOSC4-203ENST00000527954 ADGRB2O60241 1585 aa22.08■■□□□ 1.12
EXOSC4-203ENST00000527954 ANKARQ7Z5J8 1434 aa22.07■■□□□ 1.12
EXOSC4-203ENST00000527954 USP32Q8NFA0 1604 aa22.06■■□□□ 1.12
EXOSC4-203ENST00000527954 PLEKHG5O94827 1062 aa22.06■■□□□ 1.12
EXOSC4-203ENST00000527954 ATRNO75882 1429 aa22.06■■□□□ 1.12
EXOSC4-203ENST00000527954 TNS3Q68CZ2 1445 aa22.06■■□□□ 1.12
EXOSC4-203ENST00000527954 BCL9LQ86UU0 1499 aa22.05■■□□□ 1.12
EXOSC4-203ENST00000527954 WASLO00401 505 aaPredicted RBP22.05■■□□□ 1.12
EXOSC4-203ENST00000527954 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
EXOSC4-203ENST00000527954 PRR36Q9H6K5 1346 aa22.05■■□□□ 1.12
EXOSC4-203ENST00000527954 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
EXOSC4-203ENST00000527954 SBNO1A3KN83 1393 aa22.03■■□□□ 1.12
EXOSC4-203ENST00000527954 HAP1P54257 671 aaPredicted RBP22.03■■□□□ 1.12
EXOSC4-203ENST00000527954 MARF1Q9Y4F3 1742 aaKnown RBP22.02■■□□□ 1.12
EXOSC4-203ENST00000527954 EIF3AQ14152 1382 aaKnown RBP22.01■■□□□ 1.11
EXOSC4-203ENST00000527954 TULP4Q9NRJ4 1543 aa22.01■■□□□ 1.11
EXOSC4-203ENST00000527954 NBPF1Q3BBV0 1214 aa21.99■■□□□ 1.11
EXOSC4-203ENST00000527954 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
EXOSC4-203ENST00000527954 ARHGEF28Q8N1W1 1705 aaKnown RBP21.98■■□□□ 1.11
EXOSC4-203ENST00000527954 UNC5CLQ8IV45 518 aa21.98■■□□□ 1.11
EXOSC4-203ENST00000527954 GJD4Q96KN9 370 aaPredicted RBP21.98■■□□□ 1.11
EXOSC4-203ENST00000527954 GPRASP1Q5JY77 1395 aa21.98■■□□□ 1.11
EXOSC4-203ENST00000527954 SLIT2O94813 1529 aa21.97■■□□□ 1.11
EXOSC4-203ENST00000527954 NGDNQ8NEJ9 315 aaKnown RBP21.97■■□□□ 1.11
EXOSC4-203ENST00000527954 NUDT16Q96DE0 195 aaKnown RBP21.96■■□□□ 1.11
EXOSC4-203ENST00000527954 CDK19Q9BWU1 502 aa21.94■■□□□ 1.1
EXOSC4-203ENST00000527954 ATAD2Q6PL18 1390 aa21.93■■□□□ 1.1
EXOSC4-203ENST00000527954 SIN3AQ96ST3 1273 aa21.93■■□□□ 1.1
EXOSC4-203ENST00000527954 KIAA1210Q9ULL0 1709 aa21.93■■□□□ 1.1
EXOSC4-203ENST00000527954 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
EXOSC4-203ENST00000527954 PAK3O75914 559 aaPredicted RBP21.92■■□□□ 1.1
EXOSC4-203ENST00000527954 L3MBTL2Q969R5 705 aa21.92■■□□□ 1.1
EXOSC4-203ENST00000527954 ATP7BP35670 1465 aa21.91■■□□□ 1.1
EXOSC4-203ENST00000527954 FAM83GA6ND36 823 aa21.91■■□□□ 1.1
EXOSC4-203ENST00000527954 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.91■■□□□ 1.1
EXOSC4-203ENST00000527954 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
EXOSC4-203ENST00000527954 ABCA3Q99758 1704 aa21.9■■□□□ 1.1
EXOSC4-203ENST00000527954 GLI3P10071 1580 aa21.88■■□□□ 1.09
EXOSC4-203ENST00000527954 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
EXOSC4-203ENST00000527954 VPS72Q15906 364 aa21.88■■□□□ 1.09
EXOSC4-203ENST00000527954 ALS2Q96Q42 1657 aa21.88■■□□□ 1.09
EXOSC4-203ENST00000527954 CCDC9Q9Y3X0 531 aaKnown RBP21.87■■□□□ 1.09
EXOSC4-203ENST00000527954 CCDC61Q9Y6R9 512 aa21.86■■□□□ 1.09
EXOSC4-203ENST00000527954 PLCH1Q4KWH8 1693 aa21.85■■□□□ 1.09
EXOSC4-203ENST00000527954 ACEP12821 1306 aa21.85■■□□□ 1.09
EXOSC4-203ENST00000527954 CENPJQ9HC77 1338 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms