RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 KNDC1Q76NI1 1749 aa12.65□□□□□ -0.38
CHD7-206ENST00000527900 SOS2Q07890 1332 aaPredicted RBP12.65□□□□□ -0.38
CHD7-206ENST00000527900 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
CHD7-206ENST00000527900 ZNF772Q68DY9 489 aaPredicted RBP12.64□□□□□ -0.39
CHD7-206ENST00000527900 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
CHD7-206ENST00000527900 WAPLQ7Z5K2 1190 aa12.64□□□□□ -0.39
CHD7-206ENST00000527900 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
CHD7-206ENST00000527900 C14orf93Q9H972 538 aaKnown RBP12.64□□□□□ -0.39
CHD7-206ENST00000527900 HRCP23327 699 aa12.63□□□□□ -0.39
CHD7-206ENST00000527900 MYOM2P54296 1465 aa12.62□□□□□ -0.39
CHD7-206ENST00000527900 PLEKHH1Q9ULM0 1364 aa12.62□□□□□ -0.39
CHD7-206ENST00000527900 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
CHD7-206ENST00000527900 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
CHD7-206ENST00000527900 MEX3CQ5U5Q3 659 aaKnown RBP12.62□□□□□ -0.39
CHD7-206ENST00000527900 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
CHD7-206ENST00000527900 YTHDC2Q9H6S0 1430 aaKnown RBP12.62□□□□□ -0.39
CHD7-206ENST00000527900 STK26Q9P289 416 aa12.61□□□□□ -0.39
CHD7-206ENST00000527900 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
CHD7-206ENST00000527900 AFF2P51816 1311 aa12.6□□□□□ -0.39
CHD7-206ENST00000527900 PXDNQ92626 1479 aa12.59□□□□□ -0.39
CHD7-206ENST00000527900 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
CHD7-206ENST00000527900 FMN2Q9NZ56 1722 aa12.59□□□□□ -0.39
CHD7-206ENST00000527900 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
CHD7-206ENST00000527900 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
CHD7-206ENST00000527900 RXRBP28702 533 aa12.57□□□□□ -0.4
CHD7-206ENST00000527900 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
CHD7-206ENST00000527900 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
CHD7-206ENST00000527900 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
CHD7-206ENST00000527900 FOXO3O43524 673 aa12.56□□□□□ -0.4
CHD7-206ENST00000527900 ADGRB1O14514 1584 aa12.56□□□□□ -0.4
CHD7-206ENST00000527900 FNBP4Q8N3X1 1017 aaPredicted RBP12.55□□□□□ -0.4
CHD7-206ENST00000527900 C8orf37Q96NL8 207 aa12.55□□□□□ -0.4
CHD7-206ENST00000527900 QTRT2Q9H974 415 aaKnown RBP12.55□□□□□ -0.4
CHD7-206ENST00000527900 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
CHD7-206ENST00000527900 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
CHD7-206ENST00000527900 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHD7-206ENST00000527900 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
CHD7-206ENST00000527900 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
CHD7-206ENST00000527900 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
CHD7-206ENST00000527900 KIF1AQ12756 1690 aa12.53□□□□□ -0.4
CHD7-206ENST00000527900 MARF1Q9Y4F3 1742 aaKnown RBP12.53□□□□□ -0.4
CHD7-206ENST00000527900 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
CHD7-206ENST00000527900 XPCQ01831 940 aaPredicted RBP12.52□□□□□ -0.41
CHD7-206ENST00000527900 PRAM1Q96QH2 718 aa12.52□□□□□ -0.41
CHD7-206ENST00000527900 SPATA31A3Q5VYP0 1347 aa12.52□□□□□ -0.41
CHD7-206ENST00000527900 DCAF11Q8TEB1 546 aa12.51□□□□□ -0.41
CHD7-206ENST00000527900 ADGRB2O60241 1585 aa12.51□□□□□ -0.41
CHD7-206ENST00000527900 USP32Q8NFA0 1604 aa12.51□□□□□ -0.41
CHD7-206ENST00000527900 USP21Q9UK80 565 aa12.5□□□□□ -0.41
CHD7-206ENST00000527900 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
CHD7-206ENST00000527900 RGS12O14924 1447 aa12.5□□□□□ -0.41
CHD7-206ENST00000527900 BCL9LQ86UU0 1499 aa12.5□□□□□ -0.41
CHD7-206ENST00000527900 ATRNO75882 1429 aa12.49□□□□□ -0.41
CHD7-206ENST00000527900 KRT28Q7Z3Y7 464 aa12.49□□□□□ -0.41
CHD7-206ENST00000527900 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
CHD7-206ENST00000527900 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
CHD7-206ENST00000527900 SAFB2Q14151 953 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHD7-206ENST00000527900 TRPC5Q9UL62 973 aaPredicted RBP12.48□□□□□ -0.41
CHD7-206ENST00000527900 TRAK1Q9UPV9 953 aa12.48□□□□□ -0.41
CHD7-206ENST00000527900 POGKQ9P215 609 aa12.47□□□□□ -0.41
CHD7-206ENST00000527900 SBNO1A3KN83 1393 aa12.46□□□□□ -0.41
CHD7-206ENST00000527900 SLIT2O94813 1529 aa12.46□□□□□ -0.42
CHD7-206ENST00000527900 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.45□□□□□ -0.42
CHD7-206ENST00000527900 PRR36Q9H6K5 1346 aa12.45□□□□□ -0.42
CHD7-206ENST00000527900 PSME1Q06323 249 aa12.45□□□□□ -0.42
CHD7-206ENST00000527900 ARHGEF28Q8N1W1 1705 aaKnown RBP12.45□□□□□ -0.42
CHD7-206ENST00000527900 TRPM3Q9HCF6 1732 aaPredicted RBP12.45□□□□□ -0.42
CHD7-206ENST00000527900 TNS3Q68CZ2 1445 aa12.45□□□□□ -0.42
CHD7-206ENST00000527900 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
CHD7-206ENST00000527900 KIAA1210Q9ULL0 1709 aa12.44□□□□□ -0.42
CHD7-206ENST00000527900 EP400Q96L91 3159 aa12.44□□□□□ -0.42
CHD7-206ENST00000527900 MINK1Q8N4C8 1332 aaPredicted RBP12.43□□□□□ -0.42
CHD7-206ENST00000527900 TULP4Q9NRJ4 1543 aa12.43□□□□□ -0.42
CHD7-206ENST00000527900 ABCA3Q99758 1704 aa12.43□□□□□ -0.42
CHD7-206ENST00000527900 PMFBP1Q8TBY8 1022 aa12.43□□□□□ -0.42
CHD7-206ENST00000527900 HIRIP3Q9BW71 556 aaPredicted RBP12.43□□□□□ -0.42
CHD7-206ENST00000527900 ALS2Q96Q42 1657 aa12.42□□□□□ -0.42
CHD7-206ENST00000527900 UNC5CLQ8IV45 518 aa12.42□□□□□ -0.42
CHD7-206ENST00000527900 CABLES1Q8TDN4 633 aa12.42□□□□□ -0.42
CHD7-206ENST00000527900 GJD4Q96KN9 370 aaPredicted RBP12.42□□□□□ -0.42
CHD7-206ENST00000527900 GLI3P10071 1580 aa12.41□□□□□ -0.42
CHD7-206ENST00000527900 ARHGEF10O15013 1369 aa12.41□□□□□ -0.42
CHD7-206ENST00000527900 EIF3AQ14152 1382 aaKnown RBP12.41□□□□□ -0.42
CHD7-206ENST00000527900 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.43
CHD7-206ENST00000527900 FAM83GA6ND36 823 aa12.39□□□□□ -0.43
CHD7-206ENST00000527900 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
CHD7-206ENST00000527900 CRYBG1Q9Y4K1 1723 aa12.39□□□□□ -0.43
CHD7-206ENST00000527900 ATP7BP35670 1465 aa12.39□□□□□ -0.43
CHD7-206ENST00000527900 RALGAPBQ86X10 1494 aa12.39□□□□□ -0.43
CHD7-206ENST00000527900 ONECUT3O60422 494 aaPredicted RBP12.38□□□□□ -0.43
CHD7-206ENST00000527900 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
CHD7-206ENST00000527900 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
CHD7-206ENST00000527900 PLCH1Q4KWH8 1693 aa12.38□□□□□ -0.43
CHD7-206ENST00000527900 VPS72Q15906 364 aa12.37□□□□□ -0.43
CHD7-206ENST00000527900 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
CHD7-206ENST00000527900 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
CHD7-206ENST00000527900 TOPAZ1Q8N9V7 1692 aa12.36□□□□□ -0.43
CHD7-206ENST00000527900 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
CHD7-206ENST00000527900 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
CHD7-206ENST00000527900 POLR3AO14802 1390 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms