RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 SUZ12Q15022 739 aaKnown RBP7.48□□□□□ -1.21
CLNS1A-208ENST00000527265 FAM161AQ3B820 660 aa7.48□□□□□ -1.21
CLNS1A-208ENST00000527265 NPAS3Q8IXF0 933 aa7.48□□□□□ -1.21
CLNS1A-208ENST00000527265 NUTM2FA1L443 756 aa7.47□□□□□ -1.21
CLNS1A-208ENST00000527265 RDH13Q8NBN7 331 aa7.47□□□□□ -1.21
CLNS1A-208ENST00000527265 MRGPRX2Q96LB1 330 aa7.47□□□□□ -1.21
CLNS1A-208ENST00000527265 J3QL48 77 aa7.46□□□□□ -1.22
CLNS1A-208ENST00000527265 ATP6V1AP38606 617 aa7.46□□□□□ -1.22
CLNS1A-208ENST00000527265 TRIM32Q13049 653 aa7.46□□□□□ -1.22
CLNS1A-208ENST00000527265 MORN1Q5T089 497 aa7.46□□□□□ -1.22
CLNS1A-208ENST00000527265 THAP11Q96EK4 314 aa7.45□□□□□ -1.22
CLNS1A-208ENST00000527265 FUT2Q10981 343 aa7.44□□□□□ -1.22
CLNS1A-208ENST00000527265 FAM160A2Q8N612 972 aaPredicted RBP7.44□□□□□ -1.22
CLNS1A-208ENST00000527265 PXYLP1Q8TE99 480 aa7.44□□□□□ -1.22
CLNS1A-208ENST00000527265 HPS1Q92902 700 aa7.44□□□□□ -1.22
CLNS1A-208ENST00000527265 ARXQ96QS3 562 aa7.44□□□□□ -1.22
CLNS1A-208ENST00000527265 PRDM9Q9NQV7 894 aa7.44□□□□□ -1.22
CLNS1A-208ENST00000527265 SALL2Q9Y467 1007 aaPredicted RBP7.44□□□□□ -1.22
CLNS1A-208ENST00000527265 TULP1O00294 542 aaPredicted RBP7.43□□□□□ -1.22
CLNS1A-208ENST00000527265 FCHSD2O94868 740 aa7.43□□□□□ -1.22
CLNS1A-208ENST00000527265 FECHP22830 423 aa7.43□□□□□ -1.22
CLNS1A-208ENST00000527265 MSS51Q4VC12 460 aa7.43□□□□□ -1.22
CLNS1A-208ENST00000527265 MLLT3P42568 568 aaPredicted RBP7.42□□□□□ -1.22
CLNS1A-208ENST00000527265 GRIPAP1Q4V328 841 aa7.42□□□□□ -1.22
CLNS1A-208ENST00000527265 SLC27A5Q9Y2P5 690 aa7.42□□□□□ -1.22
CLNS1A-208ENST00000527265 DDX11L8A8MPP1 907 aa7.39□□□□□ -1.23
CLNS1A-208ENST00000527265 H3BM21 787 aa7.39□□□□□ -1.23
CLNS1A-208ENST00000527265 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
CLNS1A-208ENST00000527265 BRICD5Q6PL45 260 aa7.39□□□□□ -1.23
CLNS1A-208ENST00000527265 SULF1Q8IWU6 871 aa7.39□□□□□ -1.23
CLNS1A-208ENST00000527265 ARHGEF1Q92888 912 aaKnown RBP7.39□□□□□ -1.23
CLNS1A-208ENST00000527265 ALDH1A1P00352 501 aa7.38□□□□□ -1.23
CLNS1A-208ENST00000527265 VEGFBP49765 207 aa7.38□□□□□ -1.23
CLNS1A-208ENST00000527265 Q3C1V9 767 aa7.38□□□□□ -1.23
CLNS1A-208ENST00000527265 METTL3Q86U44 580 aaKnown RBP7.38□□□□□ -1.23
CLNS1A-208ENST00000527265 WNT7BP56706 349 aa7.37□□□□□ -1.23
CLNS1A-208ENST00000527265 RC3H1Q5TC82 1133 aaKnown RBP7.37□□□□□ -1.23
CLNS1A-208ENST00000527265 CAPN5O15484 640 aaPredicted RBP7.35□□□□□ -1.23
CLNS1A-208ENST00000527265 BMP1P13497 986 aa7.35□□□□□ -1.23
CLNS1A-208ENST00000527265 GCGRP47871 477 aa7.35□□□□□ -1.23
CLNS1A-208ENST00000527265 MMP16P51512 607 aa7.35□□□□□ -1.23
CLNS1A-208ENST00000527265 RNF19BQ6ZMZ0 732 aa7.35□□□□□ -1.23
CLNS1A-208ENST00000527265 CCDC24Q8N4L8 307 aa7.35□□□□□ -1.23
CLNS1A-208ENST00000527265 WASF2Q9Y6W5 498 aa7.35□□□□□ -1.23
CLNS1A-208ENST00000527265 KCNMA1Q12791 1236 aa7.34□□□□□ -1.23
CLNS1A-208ENST00000527265 KCTD17Q8N5Z5 321 aa7.34□□□□□ -1.23
CLNS1A-208ENST00000527265 ERBB4Q15303 1308 aa7.33□□□□□ -1.24
CLNS1A-208ENST00000527265 HIC1Q14526 733 aa7.33□□□□□ -1.24
CLNS1A-208ENST00000527265 GTF3C3Q9Y5Q9 886 aa7.33□□□□□ -1.24
CLNS1A-208ENST00000527265 RNF225M0QZC1 329 aaPredicted RBP7.32□□□□□ -1.24
CLNS1A-208ENST00000527265 TRIM46Q7Z4K8 759 aa7.31□□□□□ -1.24
CLNS1A-208ENST00000527265 TMEM151AQ8N4L1 468 aa7.31□□□□□ -1.24
CLNS1A-208ENST00000527265 DXOO77932 396 aaKnown RBP7.3□□□□□ -1.24
CLNS1A-208ENST00000527265 EHBP1Q8NDI1 1231 aa7.3□□□□□ -1.24
CLNS1A-208ENST00000527265 USB1Q9BQ65 265 aaKnown RBP7.3□□□□□ -1.24
CLNS1A-208ENST00000527265 SKOR1P84550 965 aa7.29□□□□□ -1.24
CLNS1A-208ENST00000527265 SCARF1Q14162 830 aa7.28□□□□□ -1.24
CLNS1A-208ENST00000527265 ZFP42Q96MM3 310 aa7.28□□□□□ -1.24
CLNS1A-208ENST00000527265 GDF11O95390 407 aa7.27□□□□□ -1.25
CLNS1A-208ENST00000527265 VSIG8P0DPA2 414 aa7.26□□□□□ -1.25
CLNS1A-208ENST00000527265 ERICH6Q7L0X2 663 aa7.26□□□□□ -1.25
CLNS1A-208ENST00000527265 HOMEZQ8IX15 550 aa7.26□□□□□ -1.25
CLNS1A-208ENST00000527265 KCNV2Q8TDN2 545 aa7.25□□□□□ -1.25
CLNS1A-208ENST00000527265 GNPATO15228 680 aa7.24□□□□□ -1.25
CLNS1A-208ENST00000527265 RASSF7Q02833 373 aa7.24□□□□□ -1.25
CLNS1A-208ENST00000527265 SIAH2O43255 324 aa7.22□□□□□ -1.25
CLNS1A-208ENST00000527265 MRPL14Q6P1L8 145 aaKnown RBP7.22□□□□□ -1.25
CLNS1A-208ENST00000527265 NLRP7Q8WX94 980 aa7.22□□□□□ -1.25
CLNS1A-208ENST00000527265 PLEKHG3A1L390 1219 aa7.21□□□□□ -1.26
CLNS1A-208ENST00000527265 TMEM132AQ24JP5 1023 aa7.2□□□□□ -1.26
CLNS1A-208ENST00000527265 P3H3Q8IVL6 736 aa7.2□□□□□ -1.26
CLNS1A-208ENST00000527265 PURBQ96QR8 312 aaKnown RBP7.2□□□□□ -1.26
CLNS1A-208ENST00000527265 MAN1A2O60476 641 aa7.19□□□□□ -1.26
CLNS1A-208ENST00000527265 KDM4AO75164 1064 aa7.19□□□□□ -1.26
CLNS1A-208ENST00000527265 IGHA1P01876 353 aa7.19□□□□□ -1.26
CLNS1A-208ENST00000527265 JUNDP17535 347 aa7.19□□□□□ -1.26
CLNS1A-208ENST00000527265 GSK3AP49840 483 aa7.19□□□□□ -1.26
CLNS1A-208ENST00000527265 USP46P62068 366 aa7.19□□□□□ -1.26
CLNS1A-208ENST00000527265 SMYD5Q6GMV2 418 aa7.18□□□□□ -1.26
CLNS1A-208ENST00000527265 NUDT12Q9BQG2 462 aa7.18□□□□□ -1.26
CLNS1A-208ENST00000527265 GPAT2Q6NUI2 795 aa7.17□□□□□ -1.26
CLNS1A-208ENST00000527265 SEMA3EO15041 775 aa7.16□□□□□ -1.26
CLNS1A-208ENST00000527265 ADH1CP00326 375 aa7.16□□□□□ -1.26
CLNS1A-208ENST00000527265 NNTQ13423 1086 aa7.16□□□□□ -1.26
CLNS1A-208ENST00000527265 DNMT3AQ9Y6K1 912 aaPredicted RBP7.16□□□□□ -1.26
CLNS1A-208ENST00000527265 SOBPA7XYQ1 873 aa7.15□□□□□ -1.26
CLNS1A-208ENST00000527265 CD46P15529 392 aa7.15□□□□□ -1.26
CLNS1A-208ENST00000527265 WDR4P57081 412 aaKnown RBP7.15□□□□□ -1.26
CLNS1A-208ENST00000527265 FOXK2Q01167 660 aa7.15□□□□□ -1.26
CLNS1A-208ENST00000527265 ADAMTS8Q9UP79 889 aa7.15□□□□□ -1.26
CLNS1A-208ENST00000527265 SH3BP2P78314 561 aa7.14□□□□□ -1.27
CLNS1A-208ENST00000527265 TLL2Q9Y6L7 1015 aa7.14□□□□□ -1.27
CLNS1A-208ENST00000527265 PPFIA3O75145 1194 aa7.13□□□□□ -1.27
CLNS1A-208ENST00000527265 UPP2O95045 317 aa7.13□□□□□ -1.27
CLNS1A-208ENST00000527265 RBM26Q5T8P6 1007 aaKnown RBP7.13□□□□□ -1.27
CLNS1A-208ENST00000527265 C14orf37Q86TY3 774 aa7.13□□□□□ -1.27
CLNS1A-208ENST00000527265 CCNYL3P0C7X3 344 aa7.12□□□□□ -1.27
CLNS1A-208ENST00000527265 TIMP2P16035 220 aa7.12□□□□□ -1.27
CLNS1A-208ENST00000527265 VARSP26640 1264 aaKnown RBP7.12□□□□□ -1.27
CLNS1A-208ENST00000527265 PTCRAQ6ISU1 281 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms