RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 EVC2Q86UK5 1308 aa23.09■■□□□ 1.29
USH1C-205ENST00000527020 TCERG1O14776 1098 aaKnown RBP23.08■■□□□ 1.29
USH1C-205ENST00000527020 DMRT2Q9Y5R5 561 aa23.08■■□□□ 1.29
USH1C-205ENST00000527020 NKTRP30414 1462 aaKnown RBP23.08■■□□□ 1.28
USH1C-205ENST00000527020 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.28
USH1C-205ENST00000527020 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.28
USH1C-205ENST00000527020 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.28
USH1C-205ENST00000527020 ANKRD36BQ8N2N9 1353 aa23.06■■□□□ 1.28
USH1C-205ENST00000527020 TSPOAP1O95153 1857 aa23.06■■□□□ 1.28
USH1C-205ENST00000527020 NGEFQ8N5V2 710 aa23.06■■□□□ 1.28
USH1C-205ENST00000527020 TNNT2P45379 298 aaPredicted RBP23.05■■□□□ 1.28
USH1C-205ENST00000527020 CGNL1Q0VF96 1302 aa23.05■■□□□ 1.28
USH1C-205ENST00000527020 PTPRMP28827 1452 aa23.05■■□□□ 1.28
USH1C-205ENST00000527020 E9PSI1 815 aa23.03■■□□□ 1.28
USH1C-205ENST00000527020 CABP2Q9NPB3 220 aa23.03■■□□□ 1.28
USH1C-205ENST00000527020 IQSEC2Q5JU85 1478 aa23.03■■□□□ 1.28
USH1C-205ENST00000527020 FBXO31Q5XUX0 539 aaPredicted RBP23.02■■□□□ 1.28
USH1C-205ENST00000527020 ERICH6Q7L0X2 663 aa23.02■■□□□ 1.28
USH1C-205ENST00000527020 REREQ9P2R6 1566 aa23.02■■□□□ 1.28
USH1C-205ENST00000527020 KDM2BQ8NHM5 1336 aa23.01■■□□□ 1.27
USH1C-205ENST00000527020 FAM69CQ0P6D2 419 aa23.01■■□□□ 1.27
USH1C-205ENST00000527020 CLTCQ00610 1675 aaKnown RBP23.01■■□□□ 1.27
USH1C-205ENST00000527020 NSD2O96028 1365 aa23■■□□□ 1.27
USH1C-205ENST00000527020 MS4A1P11836 297 aa23■■□□□ 1.27
USH1C-205ENST00000527020 SAFB2Q14151 953 aaKnown RBP eCLIP23■■□□□ 1.27
USH1C-205ENST00000527020 WWC1Q8IX03 1113 aa23■■□□□ 1.27
USH1C-205ENST00000527020 SENP3Q9H4L4 574 aaPredicted RBP23■■□□□ 1.27
USH1C-205ENST00000527020 STK26Q9P289 416 aa23■■□□□ 1.27
USH1C-205ENST00000527020 MTHFSP49914 203 aa22.99■■□□□ 1.27
USH1C-205ENST00000527020 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.99■■□□□ 1.27
USH1C-205ENST00000527020 SKAP1Q86WV1 359 aa22.98■■□□□ 1.27
USH1C-205ENST00000527020 ALKQ9UM73 1620 aa22.98■■□□□ 1.27
USH1C-205ENST00000527020 AGLP35573 1532 aa22.98■■□□□ 1.27
USH1C-205ENST00000527020 PDE4AP27815 886 aa22.97■■□□□ 1.27
USH1C-205ENST00000527020 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
USH1C-205ENST00000527020 A0A1W2PP64 1363 aa22.97■■□□□ 1.27
USH1C-205ENST00000527020 RUNDC1Q96C34 613 aa22.97■■□□□ 1.27
USH1C-205ENST00000527020 NOP58Q9Y2X3 529 aaKnown RBP22.97■■□□□ 1.27
USH1C-205ENST00000527020 BCAR3O75815 825 aa22.96■■□□□ 1.27
USH1C-205ENST00000527020 BACH2Q9BYV9 841 aa22.96■■□□□ 1.27
USH1C-205ENST00000527020 PAK3O75914 559 aaPredicted RBP22.96■■□□□ 1.27
USH1C-205ENST00000527020 ANP32AP39687 249 aaKnown RBP22.96■■□□□ 1.27
USH1C-205ENST00000527020 ABCC11Q96J66 1382 aa22.96■■□□□ 1.27
USH1C-205ENST00000527020 NINLQ9Y2I6 1382 aa22.96■■□□□ 1.27
USH1C-205ENST00000527020 ANKRD26Q9UPS8 1709 aa22.95■■□□□ 1.26
USH1C-205ENST00000527020 IPO9Q96P70 1041 aaKnown RBP22.95■■□□□ 1.26
USH1C-205ENST00000527020 PHF23Q9BUL5 403 aaPredicted RBP22.95■■□□□ 1.26
USH1C-205ENST00000527020 CD163L1Q9NR16 1453 aa22.93■■□□□ 1.26
USH1C-205ENST00000527020 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
USH1C-205ENST00000527020 PRAM1Q96QH2 718 aa22.92■■□□□ 1.26
USH1C-205ENST00000527020 RRP7AQ9Y3A4 280 aaKnown RBP22.92■■□□□ 1.26
USH1C-205ENST00000527020 SRPK2P78362 688 aaKnown RBP22.91■■□□□ 1.26
USH1C-205ENST00000527020 CFAP53Q96M91 514 aa22.91■■□□□ 1.26
USH1C-205ENST00000527020 SETD1AO15047 1707 aaKnown RBP22.91■■□□□ 1.26
USH1C-205ENST00000527020 CENPQQ7L2Z9 268 aaPredicted RBP22.91■■□□□ 1.26
USH1C-205ENST00000527020 MINK1Q8N4C8 1332 aaPredicted RBP22.91■■□□□ 1.26
USH1C-205ENST00000527020 SPATA31D1Q6ZQQ2 1576 aa22.91■■□□□ 1.26
USH1C-205ENST00000527020 ADGRB2O60241 1585 aa22.9■■□□□ 1.26
USH1C-205ENST00000527020 ATAD2Q6PL18 1390 aa22.9■■□□□ 1.26
USH1C-205ENST00000527020 NLRP1Q9C000 1473 aa22.89■■□□□ 1.26
USH1C-205ENST00000527020 NEUROD2Q15784 382 aa22.89■■□□□ 1.26
USH1C-205ENST00000527020 A2ML1A8K2U0 1454 aa22.88■■□□□ 1.25
USH1C-205ENST00000527020 ARHGEF40Q8TER5 1519 aa22.88■■□□□ 1.25
USH1C-205ENST00000527020 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
USH1C-205ENST00000527020 COL3A1P02461 1466 aaPredicted RBP22.87■■□□□ 1.25
USH1C-205ENST00000527020 MED14O60244 1454 aa22.86■■□□□ 1.25
USH1C-205ENST00000527020 CCDC27Q2M243 656 aa22.86■■□□□ 1.25
USH1C-205ENST00000527020 POGKQ9P215 609 aa22.86■■□□□ 1.25
USH1C-205ENST00000527020 WDR63Q8IWG1 891 aa22.86■■□□□ 1.25
USH1C-205ENST00000527020 GGNBP2Q9H3C7 697 aa22.85■■□□□ 1.25
USH1C-205ENST00000527020 KIF20BQ96Q89 1820 aa22.84■■□□□ 1.25
USH1C-205ENST00000527020 DLC1Q96QB1 1528 aa22.84■■□□□ 1.25
USH1C-205ENST00000527020 FYB1O15117 783 aa22.83■■□□□ 1.25
USH1C-205ENST00000527020 NCBP3Q53F19 620 aaKnown RBP22.83■■□□□ 1.25
USH1C-205ENST00000527020 STAG3Q9UJ98 1225 aa22.83■■□□□ 1.25
USH1C-205ENST00000527020 PDE3AQ14432 1141 aa22.83■■□□□ 1.24
USH1C-205ENST00000527020 TERF2IPQ9NYB0 399 aa22.83■■□□□ 1.24
USH1C-205ENST00000527020 U2AF1L5P0DN76 240 aaPredicted RBP22.82■■□□□ 1.24
USH1C-205ENST00000527020 U2AF1Q01081 240 aaKnown RBP eCLIP22.82■■□□□ 1.24
USH1C-205ENST00000527020 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
USH1C-205ENST00000527020 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
USH1C-205ENST00000527020 KIF13AQ9H1H9 1805 aa22.81■■□□□ 1.24
USH1C-205ENST00000527020 RIMS2Q9UQ26 1411 aa22.81■■□□□ 1.24
USH1C-205ENST00000527020 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
USH1C-205ENST00000527020 RARSP54136 660 aaKnown RBP22.8■■□□□ 1.24
USH1C-205ENST00000527020 ZBTB47Q9UFB7 747 aaPredicted RBP22.8■■□□□ 1.24
USH1C-205ENST00000527020 PLEKHF1Q96S99 279 aa22.78■■□□□ 1.24
USH1C-205ENST00000527020 PANK1Q8TE04 598 aa22.77■■□□□ 1.24
USH1C-205ENST00000527020 MLECQ14165 292 aa22.76■■□□□ 1.23
USH1C-205ENST00000527020 CABP1Q9NZU7 370 aa22.76■■□□□ 1.23
USH1C-205ENST00000527020 HDGFL2Q7Z4V5 671 aaPredicted RBP22.75■■□□□ 1.23
USH1C-205ENST00000527020 WAPLQ7Z5K2 1190 aa22.75■■□□□ 1.23
USH1C-205ENST00000527020 IGHDP01880 384 aa22.74■■□□□ 1.23
USH1C-205ENST00000527020 COG6Q9Y2V7 657 aa22.74■■□□□ 1.23
USH1C-205ENST00000527020 CANXP27824 592 aaKnown RBP22.73■■□□□ 1.23
USH1C-205ENST00000527020 PNPLA6Q8IY17 1366 aa22.73■■□□□ 1.23
USH1C-205ENST00000527020 U2SURPO15042 1029 aaKnown RBP22.72■■□□□ 1.23
USH1C-205ENST00000527020 ATP7BP35670 1465 aa22.72■■□□□ 1.23
USH1C-205ENST00000527020 FRAT1Q92837 279 aaPredicted RBP22.72■■□□□ 1.23
USH1C-205ENST00000527020 CLUAP1Q96AJ1 413 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms