RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 KNDC1Q76NI1 1749 aa28.15■■■□□ 2.1
CAPN1-206ENST00000526966 FOXD1Q16676 465 aa28.15■■■□□ 2.1
CAPN1-206ENST00000526966 QTRT2Q9H974 415 aaKnown RBP28.15■■■□□ 2.1
CAPN1-206ENST00000526966 ADGRF5Q8IZF2 1346 aa28.14■■■□□ 2.09
CAPN1-206ENST00000526966 ADAMTS2O95450 1211 aa28.12■■■□□ 2.09
CAPN1-206ENST00000526966 PXDNQ92626 1479 aa28.11■■■□□ 2.09
CAPN1-206ENST00000526966 NGLY1Q96IV0 654 aa28.11■■■□□ 2.09
CAPN1-206ENST00000526966 ANKRD30BQ9BXX2 1392 aa28.11■■■□□ 2.09
CAPN1-206ENST00000526966 MYOM2P54296 1465 aa28.1■■■□□ 2.09
CAPN1-206ENST00000526966 MARF1Q9Y4F3 1742 aaKnown RBP28.09■■■□□ 2.09
CAPN1-206ENST00000526966 LRPPRCP42704 1394 aaKnown RBP28.09■■■□□ 2.09
CAPN1-206ENST00000526966 NPHP3Q7Z494 1330 aa28.08■■■□□ 2.09
CAPN1-206ENST00000526966 PIK3C2GO75747 1445 aa28.08■■■□□ 2.09
CAPN1-206ENST00000526966 ABCC11Q96J66 1382 aa28.06■■■□□ 2.08
CAPN1-206ENST00000526966 FMN2Q9NZ56 1722 aa28.06■■■□□ 2.08
CAPN1-206ENST00000526966 ESCO1Q5FWF5 840 aa28.05■■■□□ 2.08
CAPN1-206ENST00000526966 FNBP4Q8N3X1 1017 aaPredicted RBP28.05■■■□□ 2.08
CAPN1-206ENST00000526966 MPHOSPH9Q99550 1183 aa28.05■■■□□ 2.08
CAPN1-206ENST00000526966 RGL3Q3MIN7 710 aa28.04■■■□□ 2.08
CAPN1-206ENST00000526966 USP21Q9UK80 565 aa28.04■■■□□ 2.08
CAPN1-206ENST00000526966 ATRNO75882 1429 aa28.02■■■□□ 2.08
CAPN1-206ENST00000526966 KIF1AQ12756 1690 aa28.01■■■□□ 2.07
CAPN1-206ENST00000526966 WAPLQ7Z5K2 1190 aa28.01■■■□□ 2.07
CAPN1-206ENST00000526966 STK26Q9P289 416 aa28.01■■■□□ 2.07
CAPN1-206ENST00000526966 TRPC5Q9UL62 973 aaPredicted RBP28.01■■■□□ 2.07
CAPN1-206ENST00000526966 PLEKHH1Q9ULM0 1364 aa28■■■□□ 2.07
CAPN1-206ENST00000526966 YTHDC2Q9H6S0 1430 aaKnown RBP27.99■■■□□ 2.07
CAPN1-206ENST00000526966 FOXO3O43524 673 aa27.98■■■□□ 2.07
CAPN1-206ENST00000526966 TMEM132EQ6IEE7 984 aa27.97■■■□□ 2.07
CAPN1-206ENST00000526966 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.97■■■□□ 2.07
CAPN1-206ENST00000526966 BCL9LQ86UU0 1499 aa27.96■■■□□ 2.07
CAPN1-206ENST00000526966 NRXN1Q9ULB1 1477 aa27.96■■■□□ 2.07
CAPN1-206ENST00000526966 ATAD2Q6PL18 1390 aa27.96■■■□□ 2.07
CAPN1-206ENST00000526966 XPCQ01831 940 aaPredicted RBP27.95■■■□□ 2.06
CAPN1-206ENST00000526966 EP400Q96L91 3159 aa27.95■■■□□ 2.06
CAPN1-206ENST00000526966 RGPD8O14715 1765 aaPredicted RBP27.94■■■□□ 2.06
CAPN1-206ENST00000526966 NUTM2FA1L443 756 aa27.93■■■□□ 2.06
CAPN1-206ENST00000526966 SIRT1Q96EB6 747 aa27.92■■■□□ 2.06
CAPN1-206ENST00000526966 ACIN1Q9UKV3 1341 aaKnown RBP27.92■■■□□ 2.06
CAPN1-206ENST00000526966 C14orf93Q9H972 538 aaKnown RBP27.9■■■□□ 2.06
CAPN1-206ENST00000526966 SPATA31A3Q5VYP0 1347 aa27.89■■■□□ 2.05
CAPN1-206ENST00000526966 USP32Q8NFA0 1604 aa27.89■■■□□ 2.05
CAPN1-206ENST00000526966 SLIT2O94813 1529 aa27.87■■■□□ 2.05
CAPN1-206ENST00000526966 GLI3P10071 1580 aa27.84■■■□□ 2.05
CAPN1-206ENST00000526966 DHX57Q6P158 1386 aaKnown RBP27.84■■■□□ 2.05
CAPN1-206ENST00000526966 DLC1Q96QB1 1528 aa27.83■■■□□ 2.05
CAPN1-206ENST00000526966 GJD4Q96KN9 370 aaPredicted RBP27.83■■■□□ 2.05
CAPN1-206ENST00000526966 ABCA3Q99758 1704 aa27.83■■■□□ 2.05
CAPN1-206ENST00000526966 TNS3Q68CZ2 1445 aa27.83■■■□□ 2.05
CAPN1-206ENST00000526966 SRCAPQ6ZRS2 3230 aa27.82■■■□□ 2.04
CAPN1-206ENST00000526966 CFAP70Q5T0N1 1121 aa27.82■■■□□ 2.04
CAPN1-206ENST00000526966 KRT28Q7Z3Y7 464 aa27.81■■■□□ 2.04
CAPN1-206ENST00000526966 ADGRB2O60241 1585 aa27.81■■■□□ 2.04
CAPN1-206ENST00000526966 RALGAPBQ86X10 1494 aa27.79■■■□□ 2.04
CAPN1-206ENST00000526966 PHF8Q9UPP1 1060 aa27.79■■■□□ 2.04
CAPN1-206ENST00000526966 ADGRB1O14514 1584 aa27.78■■■□□ 2.04
CAPN1-206ENST00000526966 UNC5CLQ8IV45 518 aa27.78■■■□□ 2.04
CAPN1-206ENST00000526966 NWD2Q9ULI1 1742 aa27.78■■■□□ 2.04
CAPN1-206ENST00000526966 PLCH1Q4KWH8 1693 aa27.78■■■□□ 2.04
CAPN1-206ENST00000526966 BRWD3Q6RI45 1802 aa27.76■■■□□ 2.04
CAPN1-206ENST00000526966 SBNO1A3KN83 1393 aa27.76■■■□□ 2.03
CAPN1-206ENST00000526966 PRAM1Q96QH2 718 aa27.76■■■□□ 2.03
CAPN1-206ENST00000526966 ANKARQ7Z5J8 1434 aa27.75■■■□□ 2.03
CAPN1-206ENST00000526966 RAB3GAP2Q9H2M9 1393 aa27.75■■■□□ 2.03
CAPN1-206ENST00000526966 PSME1Q06323 249 aa27.74■■■□□ 2.03
CAPN1-206ENST00000526966 CCDC125Q86Z20 511 aa27.74■■■□□ 2.03
CAPN1-206ENST00000526966 TRPM3Q9HCF6 1732 aaPredicted RBP27.72■■■□□ 2.03
CAPN1-206ENST00000526966 SAFB2Q14151 953 aaKnown RBP eCLIP27.71■■■□□ 2.03
CAPN1-206ENST00000526966 ARHGEF10O15013 1369 aa27.71■■■□□ 2.03
CAPN1-206ENST00000526966 CABLES1Q8TDN4 633 aa27.68■■■□□ 2.02
CAPN1-206ENST00000526966 ALS2Q96Q42 1657 aa27.68■■■□□ 2.02
CAPN1-206ENST00000526966 POGKQ9P215 609 aa27.67■■■□□ 2.02
CAPN1-206ENST00000526966 HAP1P54257 671 aaPredicted RBP27.66■■■□□ 2.02
CAPN1-206ENST00000526966 VPS72Q15906 364 aa27.66■■■□□ 2.02
CAPN1-206ENST00000526966 NRAPQ86VF7 1730 aa27.66■■■□□ 2.02
CAPN1-206ENST00000526966 BLMP54132 1417 aaPredicted RBP27.66■■■□□ 2.02
CAPN1-206ENST00000526966 ZRANB1Q9UGI0 708 aa27.65■■■□□ 2.02
CAPN1-206ENST00000526966 TULP4Q9NRJ4 1543 aa27.65■■■□□ 2.02
CAPN1-206ENST00000526966 PMFBP1Q8TBY8 1022 aa27.63■■■□□ 2.01
CAPN1-206ENST00000526966 EIF3AQ14152 1382 aaKnown RBP27.62■■■□□ 2.01
CAPN1-206ENST00000526966 CRYBG1Q9Y4K1 1723 aa27.61■■■□□ 2.01
CAPN1-206ENST00000526966 ONECUT3O60422 494 aaPredicted RBP27.61■■■□□ 2.01
CAPN1-206ENST00000526966 LMOD2Q6P5Q4 547 aa27.61■■■□□ 2.01
CAPN1-206ENST00000526966 TRAK1Q9UPV9 953 aa27.61■■■□□ 2.01
CAPN1-206ENST00000526966 SEPT12Q8IYM1 358 aa27.6■■■□□ 2.01
CAPN1-206ENST00000526966 ARHGEF28Q8N1W1 1705 aaKnown RBP27.6■■■□□ 2.01
CAPN1-206ENST00000526966 PRR36Q9H6K5 1346 aa27.6■■■□□ 2.01
CAPN1-206ENST00000526966 COL14A1Q05707 1796 aaKnown RBP27.58■■■□□ 2.01
CAPN1-206ENST00000526966 HIRIP3Q9BW71 556 aaPredicted RBP27.58■■■□□ 2.01
CAPN1-206ENST00000526966 FAM83GA6ND36 823 aa27.57■■■□□ 2
CAPN1-206ENST00000526966 PLEKHG5O94827 1062 aa27.57■■■□□ 2
CAPN1-206ENST00000526966 STAC3Q96MF2 364 aa27.57■■■□□ 2
CAPN1-206ENST00000526966 ITSN1Q15811 1721 aa27.57■■■□□ 2
CAPN1-206ENST00000526966 MINK1Q8N4C8 1332 aaPredicted RBP27.57■■■□□ 2
CAPN1-206ENST00000526966 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
CAPN1-206ENST00000526966 GPRASP1Q5JY77 1395 aa27.56■■■□□ 2
CAPN1-206ENST00000526966 WASLO00401 505 aaPredicted RBP27.54■■■□□ 2
CAPN1-206ENST00000526966 KDM2AQ9Y2K7 1162 aa27.54■■■□□ 2
CAPN1-206ENST00000526966 CCDC9Q9Y3X0 531 aaKnown RBP27.53■■■□□ 2
CAPN1-206ENST00000526966 ATP7BP35670 1465 aa27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms