RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 EP400Q96L91 3159 aa17.58■□□□□ 0.4
RPUSD4-203ENST00000526942 HFM1A2PYH4 1435 aa17.57■□□□□ 0.4
RPUSD4-203ENST00000526942 VGFO15240 615 aaPredicted RBP17.57■□□□□ 0.4
RPUSD4-203ENST00000526942 ZRANB1Q9UGI0 708 aa17.56■□□□□ 0.4
RPUSD4-203ENST00000526942 FOXD1Q16676 465 aa17.56■□□□□ 0.4
RPUSD4-203ENST00000526942 BCL9LQ86UU0 1499 aa17.55■□□□□ 0.4
RPUSD4-203ENST00000526942 PXDNQ92626 1479 aa17.55■□□□□ 0.4
RPUSD4-203ENST00000526942 CDC42BPGQ6DT37 1551 aa17.54■□□□□ 0.4
RPUSD4-203ENST00000526942 NPHP3Q7Z494 1330 aa17.54■□□□□ 0.4
RPUSD4-203ENST00000526942 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.4
RPUSD4-203ENST00000526942 CCDC125Q86Z20 511 aa17.52■□□□□ 0.4
RPUSD4-203ENST00000526942 RPGRIP1LQ68CZ1 1315 aa17.52■□□□□ 0.39
RPUSD4-203ENST00000526942 ESCO1Q5FWF5 840 aa17.51■□□□□ 0.39
RPUSD4-203ENST00000526942 NAIPQ13075 1403 aa17.51■□□□□ 0.39
RPUSD4-203ENST00000526942 PPLO60437 1756 aa17.5■□□□□ 0.39
RPUSD4-203ENST00000526942 PPARGC1BQ86YN6 1023 aaKnown RBP17.49■□□□□ 0.39
RPUSD4-203ENST00000526942 GJD4Q96KN9 370 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-203ENST00000526942 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
RPUSD4-203ENST00000526942 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.48■□□□□ 0.39
RPUSD4-203ENST00000526942 FOXO3O43524 673 aa17.48■□□□□ 0.39
RPUSD4-203ENST00000526942 LRPPRCP42704 1394 aaKnown RBP17.46■□□□□ 0.39
RPUSD4-203ENST00000526942 GLI3P10071 1580 aa17.46■□□□□ 0.39
RPUSD4-203ENST00000526942 RALGAPBQ86X10 1494 aa17.45■□□□□ 0.38
RPUSD4-203ENST00000526942 SLIT2O94813 1529 aa17.45■□□□□ 0.38
RPUSD4-203ENST00000526942 TECPR2O15040 1411 aa17.44■□□□□ 0.38
RPUSD4-203ENST00000526942 BLMP54132 1417 aaPredicted RBP17.44■□□□□ 0.38
RPUSD4-203ENST00000526942 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
RPUSD4-203ENST00000526942 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
RPUSD4-203ENST00000526942 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
RPUSD4-203ENST00000526942 NUTM2FA1L443 756 aa17.43■□□□□ 0.38
RPUSD4-203ENST00000526942 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
RPUSD4-203ENST00000526942 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
RPUSD4-203ENST00000526942 SPATA31A3Q5VYP0 1347 aa17.41■□□□□ 0.38
RPUSD4-203ENST00000526942 ADGRF5Q8IZF2 1346 aa17.41■□□□□ 0.38
RPUSD4-203ENST00000526942 USP32Q8NFA0 1604 aa17.41■□□□□ 0.38
RPUSD4-203ENST00000526942 STK26Q9P289 416 aa17.4■□□□□ 0.38
RPUSD4-203ENST00000526942 KIF1AQ12756 1690 aa17.4■□□□□ 0.38
RPUSD4-203ENST00000526942 FMN2Q9NZ56 1722 aa17.4■□□□□ 0.38
RPUSD4-203ENST00000526942 KNDC1Q76NI1 1749 aa17.4■□□□□ 0.38
RPUSD4-203ENST00000526942 CCDC144AA2RUR9 1427 aa17.4■□□□□ 0.38
RPUSD4-203ENST00000526942 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
RPUSD4-203ENST00000526942 BRWD3Q6RI45 1802 aa17.39■□□□□ 0.37
RPUSD4-203ENST00000526942 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
RPUSD4-203ENST00000526942 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
RPUSD4-203ENST00000526942 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
RPUSD4-203ENST00000526942 IFT172Q9UG01 1749 aa17.36■□□□□ 0.37
RPUSD4-203ENST00000526942 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
RPUSD4-203ENST00000526942 SEPT12Q8IYM1 358 aa17.35■□□□□ 0.37
RPUSD4-203ENST00000526942 TNS3Q68CZ2 1445 aa17.35■□□□□ 0.37
RPUSD4-203ENST00000526942 SPATA31E1Q6ZUB1 1445 aa17.35■□□□□ 0.37
RPUSD4-203ENST00000526942 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
RPUSD4-203ENST00000526942 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
RPUSD4-203ENST00000526942 VPS72Q15906 364 aa17.35■□□□□ 0.37
RPUSD4-203ENST00000526942 LRP5O75197 1615 aa17.34■□□□□ 0.37
RPUSD4-203ENST00000526942 PIK3C2GO75747 1445 aa17.34■□□□□ 0.37
RPUSD4-203ENST00000526942 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
RPUSD4-203ENST00000526942 PLCH1Q4KWH8 1693 aa17.34■□□□□ 0.37
RPUSD4-203ENST00000526942 YTHDC2Q9H6S0 1430 aaKnown RBP17.33■□□□□ 0.37
RPUSD4-203ENST00000526942 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.37
RPUSD4-203ENST00000526942 NWD2Q9ULI1 1742 aa17.33■□□□□ 0.36
RPUSD4-203ENST00000526942 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
RPUSD4-203ENST00000526942 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
RPUSD4-203ENST00000526942 ONECUT3O60422 494 aaPredicted RBP17.31■□□□□ 0.36
RPUSD4-203ENST00000526942 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
RPUSD4-203ENST00000526942 PHF8Q9UPP1 1060 aa17.31■□□□□ 0.36
RPUSD4-203ENST00000526942 PSME1Q06323 249 aa17.3■□□□□ 0.36
RPUSD4-203ENST00000526942 KRT27Q7Z3Y8 459 aa17.3■□□□□ 0.36
RPUSD4-203ENST00000526942 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
RPUSD4-203ENST00000526942 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
RPUSD4-203ENST00000526942 SBNO1A3KN83 1393 aa17.29■□□□□ 0.36
RPUSD4-203ENST00000526942 RGPD8O14715 1765 aaPredicted RBP17.29■□□□□ 0.36
RPUSD4-203ENST00000526942 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
RPUSD4-203ENST00000526942 PLEKHG5O94827 1062 aa17.28■□□□□ 0.36
RPUSD4-203ENST00000526942 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
RPUSD4-203ENST00000526942 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
RPUSD4-203ENST00000526942 NRAPQ86VF7 1730 aa17.26■□□□□ 0.35
RPUSD4-203ENST00000526942 BAG6P46379 1132 aa17.25■□□□□ 0.35
RPUSD4-203ENST00000526942 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
RPUSD4-203ENST00000526942 A0A0G2JS52 829 aa17.24■□□□□ 0.35
RPUSD4-203ENST00000526942 FAM83GA6ND36 823 aa17.24■□□□□ 0.35
RPUSD4-203ENST00000526942 MYT1Q01538 1121 aa17.24■□□□□ 0.35
RPUSD4-203ENST00000526942 C14orf93Q9H972 538 aaKnown RBP17.24■□□□□ 0.35
RPUSD4-203ENST00000526942 FAM98CQ17RN3 349 aaKnown RBP17.23■□□□□ 0.35
RPUSD4-203ENST00000526942 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
RPUSD4-203ENST00000526942 DHX57Q6P158 1386 aaKnown RBP17.22■□□□□ 0.35
RPUSD4-203ENST00000526942 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
RPUSD4-203ENST00000526942 PRAM1Q96QH2 718 aa17.22■□□□□ 0.35
RPUSD4-203ENST00000526942 SAFB2Q14151 953 aaKnown RBP eCLIP17.21■□□□□ 0.35
RPUSD4-203ENST00000526942 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
RPUSD4-203ENST00000526942 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
RPUSD4-203ENST00000526942 TRPM3Q9HCF6 1732 aaPredicted RBP17.21■□□□□ 0.35
RPUSD4-203ENST00000526942 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
RPUSD4-203ENST00000526942 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
RPUSD4-203ENST00000526942 RGPD1P0DJD0 1748 aa17.2■□□□□ 0.34
RPUSD4-203ENST00000526942 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
RPUSD4-203ENST00000526942 DLC1Q96QB1 1528 aa17.19■□□□□ 0.34
RPUSD4-203ENST00000526942 ALS2Q96Q42 1657 aa17.19■□□□□ 0.34
RPUSD4-203ENST00000526942 EN1Q05925 392 aaPredicted RBP17.18■□□□□ 0.34
RPUSD4-203ENST00000526942 DISP2A7MBM2 1401 aa17.17■□□□□ 0.34
RPUSD4-203ENST00000526942 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms