RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
CSTF3-207ENST00000526480 ATP7AQ04656 1500 aa10.48□□□□□ -0.73
CSTF3-207ENST00000526480 ADGBQ8N7X0 1667 aa10.47□□□□□ -0.73
CSTF3-207ENST00000526480 G3V3G9 751 aa10.47□□□□□ -0.73
CSTF3-207ENST00000526480 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
CSTF3-207ENST00000526480 WDR70Q9NW82 654 aa10.47□□□□□ -0.73
CSTF3-207ENST00000526480 UBR1Q8IWV7 1749 aa10.47□□□□□ -0.73
CSTF3-207ENST00000526480 DPY19L2Q6NUT2 758 aa10.46□□□□□ -0.73
CSTF3-207ENST00000526480 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.73
CSTF3-207ENST00000526480 CFAP65Q6ZU64 1925 aaKnown RBP10.45□□□□□ -0.74
CSTF3-207ENST00000526480 SYCP2Q9BX26 1530 aa10.45□□□□□ -0.74
CSTF3-207ENST00000526480 FAM135AQ9P2D6 1515 aa10.45□□□□□ -0.74
CSTF3-207ENST00000526480 TIAM1Q13009 1591 aa10.44□□□□□ -0.74
CSTF3-207ENST00000526480 KDM5DQ9BY66 1539 aa10.44□□□□□ -0.74
CSTF3-207ENST00000526480 A2MP01023 1474 aa10.44□□□□□ -0.74
CSTF3-207ENST00000526480 PZPP20742 1482 aa10.44□□□□□ -0.74
CSTF3-207ENST00000526480 LRRC9Q6ZRR7 1453 aa10.44□□□□□ -0.74
CSTF3-207ENST00000526480 CEP350Q5VT06 3117 aa10.44□□□□□ -0.74
CSTF3-207ENST00000526480 GGT6Q6P531 493 aa10.44□□□□□ -0.74
CSTF3-207ENST00000526480 MEX3CQ5U5Q3 659 aaKnown RBP10.43□□□□□ -0.74
CSTF3-207ENST00000526480 DIP2AQ14689 1571 aa10.43□□□□□ -0.74
CSTF3-207ENST00000526480 NLRP1Q9C000 1473 aa10.42□□□□□ -0.74
CSTF3-207ENST00000526480 TMEM94Q12767 1356 aa10.41□□□□□ -0.74
CSTF3-207ENST00000526480 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
CSTF3-207ENST00000526480 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
CSTF3-207ENST00000526480 RANGAP1P46060 587 aaPredicted RBP10.41□□□□□ -0.74
CSTF3-207ENST00000526480 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
CSTF3-207ENST00000526480 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
CSTF3-207ENST00000526480 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
CSTF3-207ENST00000526480 TROQ12816 1431 aaPredicted RBP10.41□□□□□ -0.74
CSTF3-207ENST00000526480 KDM5AP29375 1690 aaKnown RBP10.41□□□□□ -0.74
CSTF3-207ENST00000526480 NHSL1Q5SYE7 1610 aa10.4□□□□□ -0.74
CSTF3-207ENST00000526480 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
CSTF3-207ENST00000526480 THEMISQ8N1K5 641 aaPredicted RBP10.4□□□□□ -0.74
CSTF3-207ENST00000526480 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
CSTF3-207ENST00000526480 AFF2P51816 1311 aa10.39□□□□□ -0.75
CSTF3-207ENST00000526480 SPATA31A6Q5VVP1 1343 aa10.39□□□□□ -0.75
CSTF3-207ENST00000526480 AHDC1Q5TGY3 1603 aaPredicted RBP10.39□□□□□ -0.75
CSTF3-207ENST00000526480 FGD6Q6ZV73 1430 aa10.39□□□□□ -0.75
CSTF3-207ENST00000526480 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
CSTF3-207ENST00000526480 SCAF11Q99590 1463 aaKnown RBP10.38□□□□□ -0.75
CSTF3-207ENST00000526480 TPRNQ4KMQ1 711 aa10.38□□□□□ -0.75
CSTF3-207ENST00000526480 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
CSTF3-207ENST00000526480 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
CSTF3-207ENST00000526480 SPAG9O60271 1321 aaKnown RBP10.36□□□□□ -0.75
CSTF3-207ENST00000526480 NWD1Q149M9 1564 aa10.36□□□□□ -0.75
CSTF3-207ENST00000526480 SLAIN1Q8ND83 568 aa10.36□□□□□ -0.75
CSTF3-207ENST00000526480 CRISPLD2Q9H0B8 497 aa10.36□□□□□ -0.75
CSTF3-207ENST00000526480 PDE4AP27815 886 aa10.35□□□□□ -0.75
CSTF3-207ENST00000526480 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
CSTF3-207ENST00000526480 NCOA2Q15596 1464 aa10.35□□□□□ -0.75
CSTF3-207ENST00000526480 PRDM15P57071 1507 aaPredicted RBP10.34□□□□□ -0.75
CSTF3-207ENST00000526480 MFSD10Q14728 455 aa10.34□□□□□ -0.75
CSTF3-207ENST00000526480 SLIT1O75093 1534 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 YY1P25490 414 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 LTKP29376 864 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 RBM6P78332 1123 aaKnown RBP10.33□□□□□ -0.76
CSTF3-207ENST00000526480 E2F4Q16254 413 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 MICALL2Q8IY33 904 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 LARP6Q9BRS8 491 aaKnown RBP10.33□□□□□ -0.76
CSTF3-207ENST00000526480 ARHGAP23Q9P227 1491 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 MAST1Q9Y2H9 1570 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 BRWD3Q6RI45 1802 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 CLIP1P30622 1438 aa10.33□□□□□ -0.76
CSTF3-207ENST00000526480 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
CSTF3-207ENST00000526480 CEP152O94986 1710 aa10.31□□□□□ -0.76
CSTF3-207ENST00000526480 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.31□□□□□ -0.76
CSTF3-207ENST00000526480 SLAIN2Q9P270 581 aa10.31□□□□□ -0.76
CSTF3-207ENST00000526480 CHD2O14647 1828 aaKnown RBP10.3□□□□□ -0.76
CSTF3-207ENST00000526480 ARHGEF1Q92888 912 aaKnown RBP10.3□□□□□ -0.76
CSTF3-207ENST00000526480 DDX27Q96GQ7 796 aaKnown RBP10.3□□□□□ -0.76
CSTF3-207ENST00000526480 TMEM121BQ9BXQ6 578 aaPredicted RBP10.3□□□□□ -0.76
CSTF3-207ENST00000526480 QTRT2Q9H974 415 aaKnown RBP10.3□□□□□ -0.76
CSTF3-207ENST00000526480 NKTRP30414 1462 aaKnown RBP10.3□□□□□ -0.76
CSTF3-207ENST00000526480 HNRNPMP52272 730 aaKnown RBP eCLIP10.29□□□□□ -0.76
CSTF3-207ENST00000526480 TET3O43151 1660 aa10.28□□□□□ -0.76
CSTF3-207ENST00000526480 ABCC3O15438 1527 aa10.28□□□□□ -0.76
CSTF3-207ENST00000526480 PIK3C2BO00750 1634 aa10.28□□□□□ -0.76
CSTF3-207ENST00000526480 ERVK-7P63135 1459 aa10.28□□□□□ -0.76
CSTF3-207ENST00000526480 MSH6P52701 1360 aa10.27□□□□□ -0.76
CSTF3-207ENST00000526480 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
CSTF3-207ENST00000526480 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.77
CSTF3-207ENST00000526480 GPATCH8Q9UKJ3 1502 aaKnown RBP10.27□□□□□ -0.77
CSTF3-207ENST00000526480 CAMTA1Q9Y6Y1 1673 aa10.26□□□□□ -0.77
CSTF3-207ENST00000526480 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
CSTF3-207ENST00000526480 ZNF777Q9ULD5 760 aaPredicted RBP10.26□□□□□ -0.77
CSTF3-207ENST00000526480 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
CSTF3-207ENST00000526480 DEFB132Q7Z7B7 95 aa10.25□□□□□ -0.77
CSTF3-207ENST00000526480 MARVELD3Q96A59 401 aa10.25□□□□□ -0.77
CSTF3-207ENST00000526480 C8orf37Q96NL8 207 aa10.25□□□□□ -0.77
CSTF3-207ENST00000526480 GPHNQ9NQX3 736 aaPredicted RBP10.25□□□□□ -0.77
CSTF3-207ENST00000526480 KCNA6P17658 529 aa10.24□□□□□ -0.77
CSTF3-207ENST00000526480 HRCP23327 699 aa10.24□□□□□ -0.77
CSTF3-207ENST00000526480 CAMK2BQ13554 666 aa10.24□□□□□ -0.77
CSTF3-207ENST00000526480 CDK11AQ9UQ88 783 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-207ENST00000526480 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
CSTF3-207ENST00000526480 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
CSTF3-207ENST00000526480 UTRNP46939 3433 aa10.22□□□□□ -0.77
CSTF3-207ENST00000526480 MARF1Q9Y4F3 1742 aaKnown RBP10.22□□□□□ -0.77
CSTF3-207ENST00000526480 ARIH1Q9Y4X5 557 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms