RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 FNBP4Q8N3X1 1017 aaPredicted RBP20.92■□□□□ 0.94
CSTF3-206ENST00000524827 TRPC5Q9UL62 973 aaPredicted RBP20.92■□□□□ 0.94
CSTF3-206ENST00000524827 MYOM2P54296 1465 aa20.92■□□□□ 0.94
CSTF3-206ENST00000524827 ATRNO75882 1429 aa20.91■□□□□ 0.94
CSTF3-206ENST00000524827 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
CSTF3-206ENST00000524827 PXDNQ92626 1479 aa20.89■□□□□ 0.94
CSTF3-206ENST00000524827 NPHP3Q7Z494 1330 aa20.89■□□□□ 0.93
CSTF3-206ENST00000524827 ESCO1Q5FWF5 840 aa20.87■□□□□ 0.93
CSTF3-206ENST00000524827 MARF1Q9Y4F3 1742 aaKnown RBP20.85■□□□□ 0.93
CSTF3-206ENST00000524827 ADGRF5Q8IZF2 1346 aa20.84■□□□□ 0.93
CSTF3-206ENST00000524827 BCL9LQ86UU0 1499 aa20.84■□□□□ 0.93
CSTF3-206ENST00000524827 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
CSTF3-206ENST00000524827 TECPR2O15040 1411 aa20.84■□□□□ 0.93
CSTF3-206ENST00000524827 SRCAPQ6ZRS2 3230 aa20.83■□□□□ 0.93
CSTF3-206ENST00000524827 FOXO3O43524 673 aa20.83■□□□□ 0.93
CSTF3-206ENST00000524827 FOXD1Q16676 465 aa20.83■□□□□ 0.93
CSTF3-206ENST00000524827 WAPLQ7Z5K2 1190 aa20.81■□□□□ 0.92
CSTF3-206ENST00000524827 STK26Q9P289 416 aa20.81■□□□□ 0.92
CSTF3-206ENST00000524827 LRPPRCP42704 1394 aaKnown RBP20.81■□□□□ 0.92
CSTF3-206ENST00000524827 CCDC144AA2RUR9 1427 aa20.8■□□□□ 0.92
CSTF3-206ENST00000524827 EP400Q96L91 3159 aa20.8■□□□□ 0.92
CSTF3-206ENST00000524827 NUTM2FA1L443 756 aa20.8■□□□□ 0.92
CSTF3-206ENST00000524827 KNDC1Q76NI1 1749 aa20.8■□□□□ 0.92
CSTF3-206ENST00000524827 IFT172Q9UG01 1749 aa20.8■□□□□ 0.92
CSTF3-206ENST00000524827 SPATA31E1Q6ZUB1 1445 aa20.79■□□□□ 0.92
CSTF3-206ENST00000524827 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.78■□□□□ 0.92
CSTF3-206ENST00000524827 ANKRD30BQ9BXX2 1392 aa20.78■□□□□ 0.92
CSTF3-206ENST00000524827 PLEKHH1Q9ULM0 1364 aa20.78■□□□□ 0.92
CSTF3-206ENST00000524827 FMN2Q9NZ56 1722 aa20.78■□□□□ 0.92
CSTF3-206ENST00000524827 ABCC11Q96J66 1382 aa20.77■□□□□ 0.92
CSTF3-206ENST00000524827 RGL3Q3MIN7 710 aa20.77■□□□□ 0.92
CSTF3-206ENST00000524827 GJD4Q96KN9 370 aaPredicted RBP20.77■□□□□ 0.92
CSTF3-206ENST00000524827 ZRANB1Q9UGI0 708 aa20.76■□□□□ 0.91
CSTF3-206ENST00000524827 KIF1AQ12756 1690 aa20.76■□□□□ 0.91
CSTF3-206ENST00000524827 TMEM132EQ6IEE7 984 aa20.75■□□□□ 0.91
CSTF3-206ENST00000524827 PIK3C2GO75747 1445 aa20.75■□□□□ 0.91
CSTF3-206ENST00000524827 SLIT2O94813 1529 aa20.74■□□□□ 0.91
CSTF3-206ENST00000524827 GLI3P10071 1580 aa20.74■□□□□ 0.91
CSTF3-206ENST00000524827 SPATA31A3Q5VYP0 1347 aa20.74■□□□□ 0.91
CSTF3-206ENST00000524827 YTHDC2Q9H6S0 1430 aaKnown RBP20.73■□□□□ 0.91
CSTF3-206ENST00000524827 CCDC125Q86Z20 511 aa20.73■□□□□ 0.91
CSTF3-206ENST00000524827 RALGAPBQ86X10 1494 aa20.73■□□□□ 0.91
CSTF3-206ENST00000524827 USP32Q8NFA0 1604 aa20.72■□□□□ 0.91
CSTF3-206ENST00000524827 UNC5CLQ8IV45 518 aa20.72■□□□□ 0.91
CSTF3-206ENST00000524827 KRT28Q7Z3Y7 464 aa20.69■□□□□ 0.9
CSTF3-206ENST00000524827 MPHOSPH9Q99550 1183 aa20.69■□□□□ 0.9
CSTF3-206ENST00000524827 TNS3Q68CZ2 1445 aa20.68■□□□□ 0.9
CSTF3-206ENST00000524827 RGPD8O14715 1765 aaPredicted RBP20.67■□□□□ 0.9
CSTF3-206ENST00000524827 BLMP54132 1417 aaPredicted RBP20.67■□□□□ 0.9
CSTF3-206ENST00000524827 BRWD3Q6RI45 1802 aa20.67■□□□□ 0.9
CSTF3-206ENST00000524827 SIRT1Q96EB6 747 aa20.65■□□□□ 0.9
CSTF3-206ENST00000524827 PHF8Q9UPP1 1060 aa20.65■□□□□ 0.9
CSTF3-206ENST00000524827 PLCH1Q4KWH8 1693 aa20.64■□□□□ 0.9
CSTF3-206ENST00000524827 HAP1P54257 671 aaPredicted RBP20.64■□□□□ 0.89
CSTF3-206ENST00000524827 C14orf93Q9H972 538 aaKnown RBP20.64■□□□□ 0.89
CSTF3-206ENST00000524827 ABCA3Q99758 1704 aa20.64■□□□□ 0.89
CSTF3-206ENST00000524827 NRXN1Q9ULB1 1477 aa20.63■□□□□ 0.89
CSTF3-206ENST00000524827 CABLES1Q8TDN4 633 aa20.63■□□□□ 0.89
CSTF3-206ENST00000524827 SBNO1A3KN83 1393 aa20.62■□□□□ 0.89
CSTF3-206ENST00000524827 NWD2Q9ULI1 1742 aa20.62■□□□□ 0.89
CSTF3-206ENST00000524827 PSME1Q06323 249 aa20.62■□□□□ 0.89
CSTF3-206ENST00000524827 VPS72Q15906 364 aa20.62■□□□□ 0.89
CSTF3-206ENST00000524827 DHX57Q6P158 1386 aaKnown RBP20.61■□□□□ 0.89
CSTF3-206ENST00000524827 PLEKHG5O94827 1062 aa20.61■□□□□ 0.89
CSTF3-206ENST00000524827 SEPT12Q8IYM1 358 aa20.61■□□□□ 0.89
CSTF3-206ENST00000524827 CFAP70Q5T0N1 1121 aa20.6■□□□□ 0.89
CSTF3-206ENST00000524827 DEFB132Q7Z7B7 95 aa20.6■□□□□ 0.89
CSTF3-206ENST00000524827 ARHGEF10O15013 1369 aa20.59■□□□□ 0.89
CSTF3-206ENST00000524827 SAFB2Q14151 953 aaKnown RBP eCLIP20.59■□□□□ 0.89
CSTF3-206ENST00000524827 PRAM1Q96QH2 718 aa20.59■□□□□ 0.89
CSTF3-206ENST00000524827 LMOD2Q6P5Q4 547 aa20.58■□□□□ 0.89
CSTF3-206ENST00000524827 CCDC9Q9Y3X0 531 aaKnown RBP20.58■□□□□ 0.89
CSTF3-206ENST00000524827 DLC1Q96QB1 1528 aa20.57■□□□□ 0.88
CSTF3-206ENST00000524827 ANKARQ7Z5J8 1434 aa20.56■□□□□ 0.88
CSTF3-206ENST00000524827 ONECUT3O60422 494 aaPredicted RBP20.56■□□□□ 0.88
CSTF3-206ENST00000524827 SF3B2Q13435 895 aaKnown RBP20.56■□□□□ 0.88
CSTF3-206ENST00000524827 ADGRB2O60241 1585 aa20.55■□□□□ 0.88
CSTF3-206ENST00000524827 NRAPQ86VF7 1730 aa20.54■□□□□ 0.88
CSTF3-206ENST00000524827 KRT27Q7Z3Y8 459 aa20.54■□□□□ 0.88
CSTF3-206ENST00000524827 PMFBP1Q8TBY8 1022 aa20.54■□□□□ 0.88
CSTF3-206ENST00000524827 TRPM3Q9HCF6 1732 aaPredicted RBP20.53■□□□□ 0.88
CSTF3-206ENST00000524827 FAM83GA6ND36 823 aa20.53■□□□□ 0.88
CSTF3-206ENST00000524827 POGKQ9P215 609 aa20.53■□□□□ 0.88
CSTF3-206ENST00000524827 ADGRB1O14514 1584 aa20.52■□□□□ 0.88
CSTF3-206ENST00000524827 A0A0G2JS52 829 aa20.5■□□□□ 0.87
CSTF3-206ENST00000524827 MYT1Q01538 1121 aa20.5■□□□□ 0.87
CSTF3-206ENST00000524827 ALS2Q96Q42 1657 aa20.5■□□□□ 0.87
CSTF3-206ENST00000524827 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
CSTF3-206ENST00000524827 LRP5O75197 1615 aa20.49■□□□□ 0.87
CSTF3-206ENST00000524827 FAM98CQ17RN3 349 aaKnown RBP20.48■□□□□ 0.87
CSTF3-206ENST00000524827 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
CSTF3-206ENST00000524827 COL14A1Q05707 1796 aaKnown RBP20.48■□□□□ 0.87
CSTF3-206ENST00000524827 PRR36Q9H6K5 1346 aa20.48■□□□□ 0.87
CSTF3-206ENST00000524827 BTG4Q9NY30 223 aa20.47■□□□□ 0.87
CSTF3-206ENST00000524827 TULP4Q9NRJ4 1543 aa20.47■□□□□ 0.87
CSTF3-206ENST00000524827 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
CSTF3-206ENST00000524827 GPRASP1Q5JY77 1395 aa20.46■□□□□ 0.87
CSTF3-206ENST00000524827 BAG6P46379 1132 aa20.46■□□□□ 0.87
CSTF3-206ENST00000524827 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
CSTF3-206ENST00000524827 MINK1Q8N4C8 1332 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms