RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 JCADQ9P266 1359 aa27.91■■■□□ 2.06
FBXO28-205ENST00000523990 WAPLQ7Z5K2 1190 aa27.91■■■□□ 2.06
FBXO28-205ENST00000523990 KDM2AQ9Y2K7 1162 aa27.91■■■□□ 2.06
FBXO28-205ENST00000523990 KIAA1210Q9ULL0 1709 aa27.9■■■□□ 2.06
FBXO28-205ENST00000523990 ILDR2Q71H61 639 aa27.9■■■□□ 2.06
FBXO28-205ENST00000523990 SIRT1Q96EB6 747 aa27.87■■■□□ 2.05
FBXO28-205ENST00000523990 ARHGEF28Q8N1W1 1705 aaKnown RBP27.86■■■□□ 2.05
FBXO28-205ENST00000523990 RGPD8O14715 1765 aaPredicted RBP27.84■■■□□ 2.05
FBXO28-205ENST00000523990 ADGRB2O60241 1585 aa27.84■■■□□ 2.05
FBXO28-205ENST00000523990 TRIM26Q12899 539 aaPredicted RBP27.84■■■□□ 2.05
FBXO28-205ENST00000523990 PHF23Q9BUL5 403 aaPredicted RBP27.82■■■□□ 2.04
FBXO28-205ENST00000523990 ORAI2Q96SN7 254 aa27.81■■■□□ 2.04
FBXO28-205ENST00000523990 LRP6O75581 1613 aa27.79■■■□□ 2.04
FBXO28-205ENST00000523990 DDX17Q92841 729 aaKnown RBP27.79■■■□□ 2.04
FBXO28-205ENST00000523990 PRAM1Q96QH2 718 aa27.79■■■□□ 2.04
FBXO28-205ENST00000523990 KIF1AQ12756 1690 aa27.79■■■□□ 2.04
FBXO28-205ENST00000523990 SPATA31A6Q5VVP1 1343 aa27.77■■■□□ 2.04
FBXO28-205ENST00000523990 USP32Q8NFA0 1604 aa27.75■■■□□ 2.03
FBXO28-205ENST00000523990 TRAK1Q9UPV9 953 aa27.75■■■□□ 2.03
FBXO28-205ENST00000523990 SIN3AQ96ST3 1273 aa27.74■■■□□ 2.03
FBXO28-205ENST00000523990 SAFB2Q14151 953 aaKnown RBP eCLIP27.73■■■□□ 2.039e-6■■■□□ 17.7
FBXO28-205ENST00000523990 SOS2Q07890 1332 aaPredicted RBP27.72■■■□□ 2.03
FBXO28-205ENST00000523990 PXDNQ92626 1479 aa27.72■■■□□ 2.03
FBXO28-205ENST00000523990 NUTM2FA1L443 756 aa27.72■■■□□ 2.03
FBXO28-205ENST00000523990 ESCO1Q5FWF5 840 aa27.72■■■□□ 2.03
FBXO28-205ENST00000523990 LRRC59Q96AG4 307 aaKnown RBP27.72■■■□□ 2.03
FBXO28-205ENST00000523990 POGKQ9P215 609 aa27.72■■■□□ 2.03
FBXO28-205ENST00000523990 RGS17Q9UGC6 210 aaPredicted RBP27.72■■■□□ 2.03
FBXO28-205ENST00000523990 PNPLA6Q8IY17 1366 aa27.7■■■□□ 2.03
FBXO28-205ENST00000523990 TRPM1Q7Z4N2 1603 aa27.7■■■□□ 2.03
FBXO28-205ENST00000523990 COL22A1Q8NFW1 1626 aaPredicted RBP27.69■■■□□ 2.02
FBXO28-205ENST00000523990 L3MBTL2Q969R5 705 aa27.68■■■□□ 2.02
FBXO28-205ENST00000523990 NPHP3Q7Z494 1330 aa27.68■■■□□ 2.02
FBXO28-205ENST00000523990 ANKARQ7Z5J8 1434 aa27.65■■■□□ 2.02
FBXO28-205ENST00000523990 TULP4Q9NRJ4 1543 aa27.64■■■□□ 2.02
FBXO28-205ENST00000523990 NEUROD1Q13562 356 aa27.64■■■□□ 2.02
FBXO28-205ENST00000523990 ITSN1Q15811 1721 aa27.63■■■□□ 2.01
FBXO28-205ENST00000523990 FOXO3O43524 673 aa27.62■■■□□ 2.01
FBXO28-205ENST00000523990 NBPF1Q3BBV0 1214 aa27.62■■■□□ 2.01
FBXO28-205ENST00000523990 HIRIP3Q9BW71 556 aaPredicted RBP27.62■■■□□ 2.01
FBXO28-205ENST00000523990 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
FBXO28-205ENST00000523990 SOCS7O14512 581 aa27.6■■■□□ 2.01
FBXO28-205ENST00000523990 QRICH2Q9H0J4 1663 aa27.6■■■□□ 2.01
FBXO28-205ENST00000523990 MEX3CQ5U5Q3 659 aaKnown RBP27.59■■■□□ 2.01
FBXO28-205ENST00000523990 EIF3AQ14152 1382 aaKnown RBP27.59■■■□□ 2.01
FBXO28-205ENST00000523990 NUTM2BA6NNL0 878 aaPredicted RBP27.58■■■□□ 2.01
FBXO28-205ENST00000523990 NUTM2EB1AL46 878 aaPredicted RBP27.58■■■□□ 2.01
FBXO28-205ENST00000523990 NUTM2AQ8IVF1 878 aaPredicted RBP27.58■■■□□ 2.01
FBXO28-205ENST00000523990 MARF1Q9Y4F3 1742 aaKnown RBP27.58■■■□□ 2.01
FBXO28-205ENST00000523990 XPCQ01831 940 aaPredicted RBP27.57■■■□□ 2
FBXO28-205ENST00000523990 PHF8Q9UPP1 1060 aa27.57■■■□□ 2
FBXO28-205ENST00000523990 TOPAZ1Q8N9V7 1692 aa27.56■■■□□ 2
FBXO28-205ENST00000523990 WASLO00401 505 aaPredicted RBP27.56■■■□□ 2
FBXO28-205ENST00000523990 POTEAQ6S8J7 498 aa27.56■■■□□ 2
FBXO28-205ENST00000523990 ATP7BP35670 1465 aa27.56■■■□□ 2
FBXO28-205ENST00000523990 TRPM3Q9HCF6 1732 aaPredicted RBP27.54■■■□□ 2
FBXO28-205ENST00000523990 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
FBXO28-205ENST00000523990 ABCA3Q99758 1704 aa27.51■■□□□ 1.99
FBXO28-205ENST00000523990 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
FBXO28-205ENST00000523990 SPATA31A3Q5VYP0 1347 aa27.49■■□□□ 1.99
FBXO28-205ENST00000523990 KRT28Q7Z3Y7 464 aa27.49■■□□□ 1.99
FBXO28-205ENST00000523990 ALS2Q96Q42 1657 aa27.48■■□□□ 1.99
FBXO28-205ENST00000523990 ROCK2O75116 1388 aaKnown RBP27.48■■□□□ 1.99
FBXO28-205ENST00000523990 TONSLQ96HA7 1378 aa27.48■■□□□ 1.99
FBXO28-205ENST00000523990 PMFBP1Q8TBY8 1022 aa27.48■■□□□ 1.99
FBXO28-205ENST00000523990 ZNF772Q68DY9 489 aaPredicted RBP27.47■■□□□ 1.99
FBXO28-205ENST00000523990 CENPJQ9HC77 1338 aaPredicted RBP27.47■■□□□ 1.99
FBXO28-205ENST00000523990 AFF2P51816 1311 aa27.46■■□□□ 1.99
FBXO28-205ENST00000523990 SBNO1A3KN83 1393 aa27.45■■□□□ 1.99
FBXO28-205ENST00000523990 C8orf37Q96NL8 207 aa27.45■■□□□ 1.98
FBXO28-205ENST00000523990 ADAMTS2O95450 1211 aa27.44■■□□□ 1.98
FBXO28-205ENST00000523990 NBPF8Q3BBV2 869 aa27.44■■□□□ 1.98
FBXO28-205ENST00000523990 GPRASP1Q5JY77 1395 aa27.44■■□□□ 1.98
FBXO28-205ENST00000523990 PSME1Q06323 249 aa27.43■■□□□ 1.98
FBXO28-205ENST00000523990 RALGAPBQ86X10 1494 aa27.43■■□□□ 1.98
FBXO28-205ENST00000523990 CDK19Q9BWU1 502 aa27.42■■□□□ 1.98
FBXO28-205ENST00000523990 NUDT16Q96DE0 195 aaKnown RBP27.41■■□□□ 1.98
FBXO28-205ENST00000523990 CRYBG1Q9Y4K1 1723 aa27.41■■□□□ 1.98
FBXO28-205ENST00000523990 ARHGEF10O15013 1369 aa27.39■■□□□ 1.97
FBXO28-205ENST00000523990 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.37■■□□□ 1.97
FBXO28-205ENST00000523990 NGLY1Q96IV0 654 aa27.36■■□□□ 1.97
FBXO28-205ENST00000523990 NGDNQ8NEJ9 315 aaKnown RBP27.35■■□□□ 1.97
FBXO28-205ENST00000523990 POLR3AO14802 1390 aaPredicted RBP27.35■■□□□ 1.97
FBXO28-205ENST00000523990 PLCH1Q4KWH8 1693 aa27.34■■□□□ 1.97
FBXO28-205ENST00000523990 FNBP4Q8N3X1 1017 aaPredicted RBP27.33■■□□□ 1.96
FBXO28-205ENST00000523990 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.96
FBXO28-205ENST00000523990 CCDC61Q9Y6R9 512 aa27.33■■□□□ 1.96
FBXO28-205ENST00000523990 CDK12Q9NYV4 1490 aaPredicted RBP27.32■■□□□ 1.96
FBXO28-205ENST00000523990 PPIP5K1Q6PFW1 1433 aa27.31■■□□□ 1.96
FBXO28-205ENST00000523990 SRPK2P78362 688 aaKnown RBP27.31■■□□□ 1.96
FBXO28-205ENST00000523990 LMOD2Q6P5Q4 547 aa27.31■■□□□ 1.96
FBXO28-205ENST00000523990 NWD2Q9ULI1 1742 aa27.31■■□□□ 1.96
FBXO28-205ENST00000523990 PHRF1Q9P1Y6 1649 aaKnown RBP27.3■■□□□ 1.96
FBXO28-205ENST00000523990 BCL9LQ86UU0 1499 aa27.29■■□□□ 1.96
FBXO28-205ENST00000523990 RXRBP28702 533 aa27.29■■□□□ 1.96
FBXO28-205ENST00000523990 CABP2Q9NPB3 220 aa27.29■■□□□ 1.96
FBXO28-205ENST00000523990 USP21Q9UK80 565 aa27.29■■□□□ 1.96
FBXO28-205ENST00000523990 ACEP12821 1306 aa27.28■■□□□ 1.96
FBXO28-205ENST00000523990 SLIT2O94813 1529 aa27.28■■□□□ 1.96
FBXO28-205ENST00000523990 PLEKHG3A1L390 1219 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms