RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 PHLPP1O60346 1717 aa8.8□□□□□ -1
PABPC1-223ENST00000523636 COL16A1Q07092 1604 aaPredicted RBP8.8□□□□□ -1
PABPC1-223ENST00000523636 MLH3Q9UHC1 1453 aa8.79□□□□□ -1
PABPC1-223ENST00000523636 PDIA6Q15084 440 aa8.79□□□□□ -1
PABPC1-223ENST00000523636 NPHP4O75161 1426 aaPredicted RBP8.79□□□□□ -1
PABPC1-223ENST00000523636 DPYSL4O14531 572 aa8.78□□□□□ -1
PABPC1-223ENST00000523636 ZNF772Q68DY9 489 aaPredicted RBP8.78□□□□□ -1
PABPC1-223ENST00000523636 ITSN2Q9NZM3 1697 aa8.78□□□□□ -1
PABPC1-223ENST00000523636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.77□□□□□ -1.01
PABPC1-223ENST00000523636 ABCC1P33527 1531 aa8.77□□□□□ -1.01
PABPC1-223ENST00000523636 LMOD2Q6P5Q4 547 aa8.77□□□□□ -1.01
PABPC1-223ENST00000523636 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
PABPC1-223ENST00000523636 JCADQ9P266 1359 aa8.76□□□□□ -1.01
PABPC1-223ENST00000523636 SLC34A2O95436 690 aa8.76□□□□□ -1.01
PABPC1-223ENST00000523636 OXER1Q8TDS5 423 aa8.76□□□□□ -1.01
PABPC1-223ENST00000523636 YY1P25490 414 aa8.75□□□□□ -1.01
PABPC1-223ENST00000523636 MAP3K9P80192 1104 aa8.75□□□□□ -1.01
PABPC1-223ENST00000523636 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
PABPC1-223ENST00000523636 MYO5CQ9NQX4 1742 aa8.74□□□□□ -1.01
PABPC1-223ENST00000523636 NHSL1Q5SYE7 1610 aa8.74□□□□□ -1.01
PABPC1-223ENST00000523636 PTCD2Q8WV60 388 aaKnown RBP8.74□□□□□ -1.01
PABPC1-223ENST00000523636 MAP3K1Q13233 1512 aa8.74□□□□□ -1.01
PABPC1-223ENST00000523636 SHPRHQ149N8 1683 aa8.73□□□□□ -1.01
PABPC1-223ENST00000523636 SAMD9Q5K651 1589 aa8.73□□□□□ -1.01
PABPC1-223ENST00000523636 TBC1D12O60347 775 aa8.72□□□□□ -1.01
PABPC1-223ENST00000523636 BCL9LQ86UU0 1499 aa8.71□□□□□ -1.01
PABPC1-223ENST00000523636 PLEKHD1A6NEE1 506 aa8.71□□□□□ -1.02
PABPC1-223ENST00000523636 ANKLE2Q86XL3 938 aa8.71□□□□□ -1.02
PABPC1-223ENST00000523636 PLXNC1O60486 1568 aa8.7□□□□□ -1.02
PABPC1-223ENST00000523636 SENP3-EIF4A1A0A087X0R7 540 aa8.7□□□□□ -1.02
PABPC1-223ENST00000523636 PTGER2P43116 358 aa8.7□□□□□ -1.02
PABPC1-223ENST00000523636 NUTM2BA6NNL0 878 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-223ENST00000523636 NUTM2EB1AL46 878 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-223ENST00000523636 MLLT3P42568 568 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-223ENST00000523636 NUTM2DQ5VT03 806 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-223ENST00000523636 NUTM2AQ8IVF1 878 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-223ENST00000523636 SPATA31A6Q5VVP1 1343 aa8.69□□□□□ -1.02
PABPC1-223ENST00000523636 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
PABPC1-223ENST00000523636 KIF14Q15058 1648 aa8.69□□□□□ -1.02
PABPC1-223ENST00000523636 CDC42BPBQ9Y5S2 1711 aa8.68□□□□□ -1.02
PABPC1-223ENST00000523636 ZNF316A6NFI3 1004 aaPredicted RBP8.68□□□□□ -1.02
PABPC1-223ENST00000523636 EFCAB2Q5VUJ9 269 aa8.68□□□□□ -1.02
PABPC1-223ENST00000523636 FBXO31Q5XUX0 539 aaPredicted RBP8.68□□□□□ -1.02
PABPC1-223ENST00000523636 AFF2P51816 1311 aa8.68□□□□□ -1.02
PABPC1-223ENST00000523636 DIP2AQ14689 1571 aa8.68□□□□□ -1.02
PABPC1-223ENST00000523636 KDM5DQ9BY66 1539 aa8.67□□□□□ -1.02
PABPC1-223ENST00000523636 UGGT1Q9NYU2 1555 aa8.66□□□□□ -1.02
PABPC1-223ENST00000523636 FGD6Q6ZV73 1430 aa8.66□□□□□ -1.02
PABPC1-223ENST00000523636 EVI5O60447 810 aa8.66□□□□□ -1.02
PABPC1-223ENST00000523636 MEX3CQ5U5Q3 659 aaKnown RBP8.66□□□□□ -1.02
PABPC1-223ENST00000523636 ANO8Q9HCE9 1232 aaPredicted RBP8.66□□□□□ -1.02
PABPC1-223ENST00000523636 ADGBQ8N7X0 1667 aa8.65□□□□□ -1.02
PABPC1-223ENST00000523636 ATP7AQ04656 1500 aa8.65□□□□□ -1.02
PABPC1-223ENST00000523636 TMEM94Q12767 1356 aa8.65□□□□□ -1.02
PABPC1-223ENST00000523636 TNRQ92752 1358 aa8.65□□□□□ -1.02
PABPC1-223ENST00000523636 RBM6P78332 1123 aaKnown RBP8.65□□□□□ -1.02
PABPC1-223ENST00000523636 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
PABPC1-223ENST00000523636 MYT1LQ9UL68 1186 aa8.65□□□□□ -1.02
PABPC1-223ENST00000523636 NWD1Q149M9 1564 aa8.65□□□□□ -1.03
PABPC1-223ENST00000523636 LRRC9Q6ZRR7 1453 aa8.64□□□□□ -1.03
PABPC1-223ENST00000523636 HRCP23327 699 aa8.64□□□□□ -1.03
PABPC1-223ENST00000523636 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
PABPC1-223ENST00000523636 SLAIN1Q8ND83 568 aa8.64□□□□□ -1.03
PABPC1-223ENST00000523636 PCDHGA4Q9Y5G9 962 aa8.64□□□□□ -1.03
PABPC1-223ENST00000523636 HOMEZQ8IX15 550 aa8.63□□□□□ -1.03
PABPC1-223ENST00000523636 QTRT2Q9H974 415 aaKnown RBP8.63□□□□□ -1.03
PABPC1-223ENST00000523636 ZSWIM6Q9HCJ5 1215 aa8.63□□□□□ -1.03
PABPC1-223ENST00000523636 SAMD9LQ8IVG5 1584 aa8.63□□□□□ -1.03
PABPC1-223ENST00000523636 ARHGAP5Q13017 1502 aa8.63□□□□□ -1.03
PABPC1-223ENST00000523636 AHDC1Q5TGY3 1603 aaPredicted RBP8.62□□□□□ -1.03
PABPC1-223ENST00000523636 TIAM1Q13009 1591 aa8.62□□□□□ -1.03
PABPC1-223ENST00000523636 RBM26Q5T8P6 1007 aaKnown RBP8.62□□□□□ -1.03
PABPC1-223ENST00000523636 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
PABPC1-223ENST00000523636 GOLGB1Q14789 3259 aaKnown RBP8.62□□□□□ -1.03
PABPC1-223ENST00000523636 GRXCR2A6NFK2 248 aa8.61□□□□□ -1.03
PABPC1-223ENST00000523636 RIMBP2O15034 1052 aa8.61□□□□□ -1.03
PABPC1-223ENST00000523636 DEFB132Q7Z7B7 95 aa8.61□□□□□ -1.03
PABPC1-223ENST00000523636 GPIHBP1Q8IV16 184 aa8.61□□□□□ -1.03
PABPC1-223ENST00000523636 THEMISQ8N1K5 641 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-223ENST00000523636 FAM135AQ9P2D6 1515 aa8.6□□□□□ -1.03
PABPC1-223ENST00000523636 PZPP20742 1482 aa8.6□□□□□ -1.03
PABPC1-223ENST00000523636 PSDA5PKW4 1024 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-223ENST00000523636 ZMYND10O75800 440 aa8.6□□□□□ -1.03
PABPC1-223ENST00000523636 HOXB3P14651 431 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-223ENST00000523636 OSBPP22059 807 aa8.6□□□□□ -1.03
PABPC1-223ENST00000523636 PCNTO95613 3336 aa8.59□□□□□ -1.03
PABPC1-223ENST00000523636 NLRP1Q9C000 1473 aa8.59□□□□□ -1.03
PABPC1-223ENST00000523636 RANGAP1P46060 587 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-223ENST00000523636 C1QTNF8P60827 252 aa8.59□□□□□ -1.03
PABPC1-223ENST00000523636 GGT6Q6P531 493 aa8.59□□□□□ -1.03
PABPC1-223ENST00000523636 ZNF784Q8NCA9 323 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-223ENST00000523636 SCAF11Q99590 1463 aaKnown RBP8.58□□□□□ -1.04
PABPC1-223ENST00000523636 MIA2Q96PC5 1412 aa8.58□□□□□ -1.04
PABPC1-223ENST00000523636 SNPHO15079 494 aa8.58□□□□□ -1.04
PABPC1-223ENST00000523636 PHF14O94880 888 aa8.58□□□□□ -1.04
PABPC1-223ENST00000523636 LTKP29376 864 aa8.58□□□□□ -1.04
PABPC1-223ENST00000523636 DDX12PQ92771 950 aa8.58□□□□□ -1.04
PABPC1-223ENST00000523636 EPAS1Q99814 870 aa8.58□□□□□ -1.04
PABPC1-223ENST00000523636 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
PABPC1-223ENST00000523636 CAMTA1Q9Y6Y1 1673 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms