RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.59
TOP1MT-217ENST00000523417 LAMC1P11047 1609 aa18.76■□□□□ 0.59
TOP1MT-217ENST00000523417 PIK3C2GO75747 1445 aa18.74■□□□□ 0.59
TOP1MT-217ENST00000523417 WAPLQ7Z5K2 1190 aa18.74■□□□□ 0.59
TOP1MT-217ENST00000523417 AFF2P51816 1311 aa18.74■□□□□ 0.59
TOP1MT-217ENST00000523417 TMEM132EQ6IEE7 984 aa18.73■□□□□ 0.59
TOP1MT-217ENST00000523417 STK26Q9P289 416 aa18.72■□□□□ 0.59
TOP1MT-217ENST00000523417 NPHP3Q7Z494 1330 aa18.72■□□□□ 0.59
TOP1MT-217ENST00000523417 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
TOP1MT-217ENST00000523417 ESCO1Q5FWF5 840 aa18.71■□□□□ 0.59
TOP1MT-217ENST00000523417 NRXN1Q9ULB1 1477 aa18.71■□□□□ 0.59
TOP1MT-217ENST00000523417 QTRT2Q9H974 415 aaKnown RBP18.7■□□□□ 0.58
TOP1MT-217ENST00000523417 RAB3GAP2Q9H2M9 1393 aa18.69■□□□□ 0.58
TOP1MT-217ENST00000523417 CDC42BPGQ6DT37 1551 aa18.69■□□□□ 0.58
TOP1MT-217ENST00000523417 YTHDC2Q9H6S0 1430 aaKnown RBP18.69■□□□□ 0.58
TOP1MT-217ENST00000523417 STAC3Q96MF2 364 aa18.69■□□□□ 0.58
TOP1MT-217ENST00000523417 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
TOP1MT-217ENST00000523417 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
TOP1MT-217ENST00000523417 C8orf37Q96NL8 207 aa18.68■□□□□ 0.58
TOP1MT-217ENST00000523417 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
TOP1MT-217ENST00000523417 FOXO3O43524 673 aa18.67■□□□□ 0.58
TOP1MT-217ENST00000523417 CFAP70Q5T0N1 1121 aa18.67■□□□□ 0.58
TOP1MT-217ENST00000523417 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.58
TOP1MT-217ENST00000523417 NGLY1Q96IV0 654 aa18.67■□□□□ 0.58
TOP1MT-217ENST00000523417 PLEKHH1Q9ULM0 1364 aa18.67■□□□□ 0.58
TOP1MT-217ENST00000523417 IFT172Q9UG01 1749 aa18.66■□□□□ 0.58
TOP1MT-217ENST00000523417 MYOM2P54296 1465 aa18.66■□□□□ 0.58
TOP1MT-217ENST00000523417 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
TOP1MT-217ENST00000523417 PXDNQ92626 1479 aa18.64■□□□□ 0.57
TOP1MT-217ENST00000523417 TRPC5Q9UL62 973 aaPredicted RBP18.61■□□□□ 0.57
TOP1MT-217ENST00000523417 KNDC1Q76NI1 1749 aa18.6■□□□□ 0.57
TOP1MT-217ENST00000523417 SPATA31A3Q5VYP0 1347 aa18.6■□□□□ 0.57
TOP1MT-217ENST00000523417 USP21Q9UK80 565 aa18.6■□□□□ 0.57
TOP1MT-217ENST00000523417 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
TOP1MT-217ENST00000523417 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
TOP1MT-217ENST00000523417 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.56
TOP1MT-217ENST00000523417 PRAM1Q96QH2 718 aa18.58■□□□□ 0.56
TOP1MT-217ENST00000523417 XPCQ01831 940 aaPredicted RBP18.57■□□□□ 0.56
TOP1MT-217ENST00000523417 PSME1Q06323 249 aa18.57■□□□□ 0.56
TOP1MT-217ENST00000523417 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
TOP1MT-217ENST00000523417 DLC1Q96QB1 1528 aa18.57■□□□□ 0.56
TOP1MT-217ENST00000523417 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
TOP1MT-217ENST00000523417 POGKQ9P215 609 aa18.55■□□□□ 0.56
TOP1MT-217ENST00000523417 ATRNO75882 1429 aa18.55■□□□□ 0.56
TOP1MT-217ENST00000523417 BCL9LQ86UU0 1499 aa18.54■□□□□ 0.56
TOP1MT-217ENST00000523417 RGS12O14924 1447 aa18.54■□□□□ 0.56
TOP1MT-217ENST00000523417 ADGRB1O14514 1584 aa18.53■□□□□ 0.56
TOP1MT-217ENST00000523417 FMN2Q9NZ56 1722 aa18.53■□□□□ 0.56
TOP1MT-217ENST00000523417 SBNO1A3KN83 1393 aa18.53■□□□□ 0.56
TOP1MT-217ENST00000523417 KDM2AQ9Y2K7 1162 aa18.52■□□□□ 0.56
TOP1MT-217ENST00000523417 ANKARQ7Z5J8 1434 aa18.51■□□□□ 0.55
TOP1MT-217ENST00000523417 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
TOP1MT-217ENST00000523417 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
TOP1MT-217ENST00000523417 GJD4Q96KN9 370 aaPredicted RBP18.5■□□□□ 0.55
TOP1MT-217ENST00000523417 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
TOP1MT-217ENST00000523417 UNC5CLQ8IV45 518 aa18.49■□□□□ 0.55
TOP1MT-217ENST00000523417 SLIT2O94813 1529 aa18.48■□□□□ 0.55
TOP1MT-217ENST00000523417 WASLO00401 505 aaPredicted RBP18.47■□□□□ 0.55
TOP1MT-217ENST00000523417 TNS3Q68CZ2 1445 aa18.47■□□□□ 0.55
TOP1MT-217ENST00000523417 ARHGEF10O15013 1369 aa18.46■□□□□ 0.55
TOP1MT-217ENST00000523417 EIF3AQ14152 1382 aaKnown RBP18.46■□□□□ 0.55
TOP1MT-217ENST00000523417 ATAD2Q6PL18 1390 aa18.45■□□□□ 0.54
TOP1MT-217ENST00000523417 CCDC125Q86Z20 511 aa18.45■□□□□ 0.54
TOP1MT-217ENST00000523417 ADGRB2O60241 1585 aa18.45■□□□□ 0.54
TOP1MT-217ENST00000523417 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
TOP1MT-217ENST00000523417 PMFBP1Q8TBY8 1022 aa18.44■□□□□ 0.54
TOP1MT-217ENST00000523417 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
TOP1MT-217ENST00000523417 MINK1Q8N4C8 1332 aaPredicted RBP18.43■□□□□ 0.54
TOP1MT-217ENST00000523417 PRR36Q9H6K5 1346 aa18.43■□□□□ 0.54
TOP1MT-217ENST00000523417 VPS72Q15906 364 aa18.42■□□□□ 0.54
TOP1MT-217ENST00000523417 CABLES1Q8TDN4 633 aa18.42■□□□□ 0.54
TOP1MT-217ENST00000523417 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
TOP1MT-217ENST00000523417 FAM83GA6ND36 823 aa18.4■□□□□ 0.54
TOP1MT-217ENST00000523417 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
TOP1MT-217ENST00000523417 HAP1P54257 671 aaPredicted RBP18.39■□□□□ 0.53
TOP1MT-217ENST00000523417 MARF1Q9Y4F3 1742 aaKnown RBP18.39■□□□□ 0.53
TOP1MT-217ENST00000523417 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.53
TOP1MT-217ENST00000523417 LMOD2Q6P5Q4 547 aa18.38■□□□□ 0.53
TOP1MT-217ENST00000523417 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
TOP1MT-217ENST00000523417 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
TOP1MT-217ENST00000523417 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
TOP1MT-217ENST00000523417 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.37■□□□□ 0.53
TOP1MT-217ENST00000523417 NGDNQ8NEJ9 315 aaKnown RBP18.36■□□□□ 0.53
TOP1MT-217ENST00000523417 CDK19Q9BWU1 502 aa18.36■□□□□ 0.53
TOP1MT-217ENST00000523417 PLEKHG3A1L390 1219 aa18.35■□□□□ 0.53
TOP1MT-217ENST00000523417 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
TOP1MT-217ENST00000523417 SEPT12Q8IYM1 358 aa18.34■□□□□ 0.53
TOP1MT-217ENST00000523417 CCDC61Q9Y6R9 512 aa18.34■□□□□ 0.53
TOP1MT-217ENST00000523417 GLI3P10071 1580 aa18.32■□□□□ 0.52
TOP1MT-217ENST00000523417 POLR3AO14802 1390 aaPredicted RBP18.31■□□□□ 0.52
TOP1MT-217ENST00000523417 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
TOP1MT-217ENST00000523417 TRPM3Q9HCF6 1732 aaPredicted RBP18.3■□□□□ 0.52
TOP1MT-217ENST00000523417 BTG4Q9NY30 223 aa18.3■□□□□ 0.52
TOP1MT-217ENST00000523417 ATP7BP35670 1465 aa18.3■□□□□ 0.52
TOP1MT-217ENST00000523417 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
TOP1MT-217ENST00000523417 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
TOP1MT-217ENST00000523417 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
TOP1MT-217ENST00000523417 PAK3O75914 559 aaPredicted RBP18.28■□□□□ 0.52
TOP1MT-217ENST00000523417 ACEP12821 1306 aa18.27■□□□□ 0.52
TOP1MT-217ENST00000523417 ARHGEF28Q8N1W1 1705 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms