RNA–Protein interactions for RNA: ENST00000522397.5

TCEA1-210, Transcript of transcription elongation factor A1, humanhuman

TSL 3

Gene TCEA1, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-210ENST00000522397 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.07
TCEA1-210ENST00000522397 MST1RQ04912 1400 aa27.95■■■□□ 2.07
TCEA1-210ENST00000522397 SAFB2Q14151 953 aaKnown RBP eCLIP27.95■■■□□ 2.06
TCEA1-210ENST00000522397 SIRT1Q96EB6 747 aa27.95■■■□□ 2.06
TCEA1-210ENST00000522397 PRAM1Q96QH2 718 aa27.95■■■□□ 2.06
TCEA1-210ENST00000522397 POGKQ9P215 609 aa27.95■■■□□ 2.06
TCEA1-210ENST00000522397 NBPF1Q3BBV0 1214 aa27.94■■■□□ 2.06
TCEA1-210ENST00000522397 CCER1Q8TC90 406 aaPredicted RBP27.94■■■□□ 2.06
TCEA1-210ENST00000522397 CLSPNQ9HAW4 1339 aa27.92■■■□□ 2.06
TCEA1-210ENST00000522397 PHLPP1O60346 1717 aa27.89■■■□□ 2.05
TCEA1-210ENST00000522397 FMN2Q9NZ56 1722 aa27.88■■■□□ 2.05
TCEA1-210ENST00000522397 NBPF8Q3BBV2 869 aa27.87■■■□□ 2.05
TCEA1-210ENST00000522397 C1orf167Q5SNV9 1468 aa27.87■■■□□ 2.05
TCEA1-210ENST00000522397 ROCK2O75116 1388 aaKnown RBP27.86■■■□□ 2.05
TCEA1-210ENST00000522397 BRINP3Q76B58 766 aa27.85■■■□□ 2.05
TCEA1-210ENST00000522397 ADGRB2O60241 1585 aa27.84■■■□□ 2.05
TCEA1-210ENST00000522397 MINK1Q8N4C8 1332 aaPredicted RBP27.83■■■□□ 2.05
TCEA1-210ENST00000522397 NUTM2FA1L443 756 aa27.82■■■□□ 2.04
TCEA1-210ENST00000522397 HIRIP3Q9BW71 556 aaPredicted RBP27.81■■■□□ 2.04
TCEA1-210ENST00000522397 NHSL1Q5SYE7 1610 aa27.81■■■□□ 2.04
TCEA1-210ENST00000522397 AHDC1Q5TGY3 1603 aaPredicted RBP27.81■■■□□ 2.04
TCEA1-210ENST00000522397 RGPD8O14715 1765 aaPredicted RBP27.79■■■□□ 2.04
TCEA1-210ENST00000522397 RALGAPBQ86X10 1494 aa27.79■■■□□ 2.04
TCEA1-210ENST00000522397 QRICH2Q9H0J4 1663 aa27.78■■■□□ 2.04
TCEA1-210ENST00000522397 COL16A1Q07092 1604 aaPredicted RBP27.78■■■□□ 2.04
TCEA1-210ENST00000522397 ORAI2Q96SN7 254 aa27.77■■■□□ 2.04
TCEA1-210ENST00000522397 ESCO1Q5FWF5 840 aa27.75■■■□□ 2.03
TCEA1-210ENST00000522397 CENPJQ9HC77 1338 aaPredicted RBP27.74■■■□□ 2.03
TCEA1-210ENST00000522397 GPRASP1Q5JY77 1395 aa27.73■■■□□ 2.03
TCEA1-210ENST00000522397 TIMELESSQ9UNS1 1208 aa27.73■■■□□ 2.03
TCEA1-210ENST00000522397 USP32Q8NFA0 1604 aa27.72■■■□□ 2.03
TCEA1-210ENST00000522397 DDX17Q92841 729 aaKnown RBP27.72■■■□□ 2.03
TCEA1-210ENST00000522397 CARD11Q9BXL7 1154 aa27.72■■■□□ 2.03
TCEA1-210ENST00000522397 EIF3AQ14152 1382 aaKnown RBP27.72■■■□□ 2.03
TCEA1-210ENST00000522397 KIF1AQ12756 1690 aa27.72■■■□□ 2.03
TCEA1-210ENST00000522397 WASLO00401 505 aaPredicted RBP27.7■■■□□ 2.02
TCEA1-210ENST00000522397 TULP4Q9NRJ4 1543 aa27.7■■■□□ 2.02
TCEA1-210ENST00000522397 ANKARQ7Z5J8 1434 aa27.68■■■□□ 2.02
TCEA1-210ENST00000522397 ITSN1Q15811 1721 aa27.66■■■□□ 2.02
TCEA1-210ENST00000522397 JCADQ9P266 1359 aa27.64■■■□□ 2.02
TCEA1-210ENST00000522397 SHPRHQ149N8 1683 aa27.63■■■□□ 2.01
TCEA1-210ENST00000522397 CDK19Q9BWU1 502 aa27.63■■■□□ 2.01
TCEA1-210ENST00000522397 MED1Q15648 1581 aaPredicted RBP27.63■■■□□ 2.01
TCEA1-210ENST00000522397 NPHP3Q7Z494 1330 aa27.63■■■□□ 2.01
TCEA1-210ENST00000522397 FOXO3O43524 673 aa27.62■■■□□ 2.01
TCEA1-210ENST00000522397 PHF8Q9UPP1 1060 aa27.62■■■□□ 2.01
TCEA1-210ENST00000522397 PRR36Q9H6K5 1346 aa27.62■■■□□ 2.01
TCEA1-210ENST00000522397 ATP7BP35670 1465 aa27.61■■■□□ 2.01
TCEA1-210ENST00000522397 XPCQ01831 940 aaPredicted RBP27.59■■■□□ 2.01
TCEA1-210ENST00000522397 LRRC59Q96AG4 307 aaKnown RBP27.59■■■□□ 2.01
TCEA1-210ENST00000522397 SOS2Q07890 1332 aaPredicted RBP27.59■■■□□ 2.01
TCEA1-210ENST00000522397 PXDNQ92626 1479 aa27.58■■■□□ 2.01
TCEA1-210ENST00000522397 SRPK2P78362 688 aaKnown RBP27.58■■■□□ 2.01
TCEA1-210ENST00000522397 PMFBP1Q8TBY8 1022 aa27.58■■■□□ 2.01
TCEA1-210ENST00000522397 TOPAZ1Q8N9V7 1692 aa27.58■■■□□ 2.01
TCEA1-210ENST00000522397 NUDT16Q96DE0 195 aaKnown RBP27.57■■■□□ 2
TCEA1-210ENST00000522397 EVC2Q86UK5 1308 aa27.55■■■□□ 2
TCEA1-210ENST00000522397 CABP2Q9NPB3 220 aa27.54■■■□□ 2
TCEA1-210ENST00000522397 DISP3Q9P2K9 1392 aa27.53■■■□□ 2
TCEA1-210ENST00000522397 PNPLA6Q8IY17 1366 aa27.51■■□□□ 1.99
TCEA1-210ENST00000522397 SPATA31A6Q5VVP1 1343 aa27.51■■□□□ 1.99
TCEA1-210ENST00000522397 PSME1Q06323 249 aa27.51■■□□□ 1.99
TCEA1-210ENST00000522397 KRT28Q7Z3Y7 464 aa27.51■■□□□ 1.99
TCEA1-210ENST00000522397 SBNO2Q9Y2G9 1366 aa27.5■■□□□ 1.99
TCEA1-210ENST00000522397 NGDNQ8NEJ9 315 aaKnown RBP27.5■■□□□ 1.99
TCEA1-210ENST00000522397 USP47Q96K76 1375 aa27.49■■□□□ 1.99
TCEA1-210ENST00000522397 CCDC61Q9Y6R9 512 aa27.49■■□□□ 1.99
TCEA1-210ENST00000522397 PPIP5K1Q6PFW1 1433 aa27.48■■□□□ 1.99
TCEA1-210ENST00000522397 ST20-MTHFSA0A0A6YYL1 179 aa27.47■■□□□ 1.99
TCEA1-210ENST00000522397 NUTM2BA6NNL0 878 aaPredicted RBP27.47■■□□□ 1.99
TCEA1-210ENST00000522397 NUTM2EB1AL46 878 aaPredicted RBP27.47■■□□□ 1.99
TCEA1-210ENST00000522397 NUTM2AQ8IVF1 878 aaPredicted RBP27.47■■□□□ 1.99
TCEA1-210ENST00000522397 LRP6O75581 1613 aa27.46■■□□□ 1.99
TCEA1-210ENST00000522397 COL22A1Q8NFW1 1626 aaPredicted RBP27.46■■□□□ 1.99
TCEA1-210ENST00000522397 PHF23Q9BUL5 403 aaPredicted RBP27.46■■□□□ 1.99
TCEA1-210ENST00000522397 TRPM3Q9HCF6 1732 aaPredicted RBP27.45■■□□□ 1.99
TCEA1-210ENST00000522397 TNS3Q68CZ2 1445 aa27.44■■□□□ 1.98
TCEA1-210ENST00000522397 SPATA31A3Q5VYP0 1347 aa27.43■■□□□ 1.98
TCEA1-210ENST00000522397 MEX3CQ5U5Q3 659 aaKnown RBP27.43■■□□□ 1.98
TCEA1-210ENST00000522397 SBNO1A3KN83 1393 aa27.42■■□□□ 1.98
TCEA1-210ENST00000522397 ACEP12821 1306 aa27.41■■□□□ 1.98
TCEA1-210ENST00000522397 LMOD2Q6P5Q4 547 aa27.41■■□□□ 1.98
TCEA1-210ENST00000522397 POLR3AO14802 1390 aaPredicted RBP27.4■■□□□ 1.98
TCEA1-210ENST00000522397 ATAD2Q6PL18 1390 aa27.4■■□□□ 1.98
TCEA1-210ENST00000522397 PLEKHG3A1L390 1219 aa27.4■■□□□ 1.98
TCEA1-210ENST00000522397 ALS2Q96Q42 1657 aa27.38■■□□□ 1.97
TCEA1-210ENST00000522397 TESK2Q96S53 571 aa27.38■■□□□ 1.97
TCEA1-210ENST00000522397 CABP1Q9NZU7 370 aa27.38■■□□□ 1.97
TCEA1-210ENST00000522397 PAK3O75914 559 aaPredicted RBP27.37■■□□□ 1.97
TCEA1-210ENST00000522397 ARHGEF10O15013 1369 aa27.36■■□□□ 1.97
TCEA1-210ENST00000522397 PLEKHG5O94827 1062 aa27.36■■□□□ 1.97
TCEA1-210ENST00000522397 SLC24A1O60721 1099 aa27.34■■□□□ 1.97
TCEA1-210ENST00000522397 AKAP12Q02952 1782 aa27.34■■□□□ 1.97
TCEA1-210ENST00000522397 ABCA3Q99758 1704 aa27.33■■□□□ 1.97
TCEA1-210ENST00000522397 ADAMTS2O95450 1211 aa27.33■■□□□ 1.97
TCEA1-210ENST00000522397 MARF1Q9Y4F3 1742 aaKnown RBP27.33■■□□□ 1.96
TCEA1-210ENST00000522397 TMF1P82094 1093 aa27.31■■□□□ 1.96
TCEA1-210ENST00000522397 HAP1P54257 671 aaPredicted RBP27.3■■□□□ 1.96
TCEA1-210ENST00000522397 TMC1Q8TDI8 760 aa27.3■■□□□ 1.96
TCEA1-210ENST00000522397 EIF4G2P78344 907 aaKnown RBP eCLIP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms