RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
SGCE-211ENST00000522045 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
SGCE-211ENST00000522045 HLA-CQ95604 372 aa12.83□□□□□ -0.36
SGCE-211ENST00000522045 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
SGCE-211ENST00000522045 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
SGCE-211ENST00000522045 ZBTB24O43167 697 aaPredicted RBP12.81□□□□□ -0.36
SGCE-211ENST00000522045 DGAT1O75907 488 aa12.81□□□□□ -0.36
SGCE-211ENST00000522045 MMP16P51512 607 aa12.81□□□□□ -0.36
SGCE-211ENST00000522045 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
SGCE-211ENST00000522045 REPIN1Q9BWE0 567 aaKnown RBP12.8□□□□□ -0.36
SGCE-211ENST00000522045 FAM187AA6NFU0 413 aa12.79□□□□□ -0.36
SGCE-211ENST00000522045 FOXC1Q12948 553 aa12.79□□□□□ -0.36
SGCE-211ENST00000522045 PKD2L1Q9P0L9 805 aa12.79□□□□□ -0.36
SGCE-211ENST00000522045 GUCA2AQ02747 115 aa12.78□□□□□ -0.36
SGCE-211ENST00000522045 AMHR2Q16671 573 aa12.78□□□□□ -0.36
SGCE-211ENST00000522045 DXOO77932 396 aaKnown RBP12.77□□□□□ -0.37
SGCE-211ENST00000522045 SSTR3P32745 418 aaPredicted RBP12.77□□□□□ -0.37
SGCE-211ENST00000522045 MYT1Q01538 1121 aa12.74□□□□□ -0.37
SGCE-211ENST00000522045 FDX1P10109 184 aa12.72□□□□□ -0.37
SGCE-211ENST00000522045 TRIM32Q13049 653 aa12.72□□□□□ -0.37
SGCE-211ENST00000522045 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
SGCE-211ENST00000522045 ZNF787Q6DD87 383 aa12.71□□□□□ -0.37
SGCE-211ENST00000522045 RETREG3Q86VR2 466 aa12.71□□□□□ -0.37
SGCE-211ENST00000522045 CYP4X1Q8N118 509 aa12.7□□□□□ -0.38
SGCE-211ENST00000522045 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
SGCE-211ENST00000522045 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
SGCE-211ENST00000522045 SYMPKQ92797 1274 aaKnown RBP12.7□□□□□ -0.38
SGCE-211ENST00000522045 JUNDP17535 347 aa12.69□□□□□ -0.38
SGCE-211ENST00000522045 TOR4AQ9NXH8 423 aa12.69□□□□□ -0.38
SGCE-211ENST00000522045 C6orf229H3BNL8 230 aa12.67□□□□□ -0.38
SGCE-211ENST00000522045 PCDHGC3Q9UN70 934 aa12.67□□□□□ -0.38
SGCE-211ENST00000522045 WNT7AO00755 349 aa12.66□□□□□ -0.38
SGCE-211ENST00000522045 AK7Q96M32 723 aa12.66□□□□□ -0.38
SGCE-211ENST00000522045 TRIM66O15016 1216 aa12.65□□□□□ -0.38
SGCE-211ENST00000522045 PARP9Q8IXQ6 854 aa12.65□□□□□ -0.38
SGCE-211ENST00000522045 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
SGCE-211ENST00000522045 MOXD2PA6NHM9 499 aa12.64□□□□□ -0.39
SGCE-211ENST00000522045 TTC24A2A3L6 582 aaPredicted RBP12.63□□□□□ -0.39
SGCE-211ENST00000522045 NDUFV2P19404 249 aa12.63□□□□□ -0.39
SGCE-211ENST00000522045 NUDT12Q9BQG2 462 aa12.63□□□□□ -0.39
SGCE-211ENST00000522045 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
SGCE-211ENST00000522045 DIXDC1Q155Q3 683 aa12.62□□□□□ -0.39
SGCE-211ENST00000522045 AAASQ9NRG9 546 aa12.62□□□□□ -0.39
SGCE-211ENST00000522045 AVPP01185 164 aa12.61□□□□□ -0.39
SGCE-211ENST00000522045 WNT7BP56706 349 aa12.6□□□□□ -0.39
SGCE-211ENST00000522045 CRIPAKQ8N1N5 446 aa12.6□□□□□ -0.39
SGCE-211ENST00000522045 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
SGCE-211ENST00000522045 MRGPRX2Q96LB1 330 aa12.6□□□□□ -0.39
SGCE-211ENST00000522045 MS4A1P11836 297 aa12.59□□□□□ -0.39
SGCE-211ENST00000522045 MTMR2Q13614 643 aa12.59□□□□□ -0.39
SGCE-211ENST00000522045 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
SGCE-211ENST00000522045 CTC1Q2NKJ3 1217 aa12.58□□□□□ -0.4
SGCE-211ENST00000522045 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
SGCE-211ENST00000522045 CCNYL3P0C7X3 344 aa12.57□□□□□ -0.4
SGCE-211ENST00000522045 GJA5P36382 358 aa12.57□□□□□ -0.4
SGCE-211ENST00000522045 AXIN1O15169 862 aa12.56□□□□□ -0.4
SGCE-211ENST00000522045 SKOR1P84550 965 aa12.56□□□□□ -0.4
SGCE-211ENST00000522045 PTPRNQ16849 979 aa12.56□□□□□ -0.4
SGCE-211ENST00000522045 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
SGCE-211ENST00000522045 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
SGCE-211ENST00000522045 SMPD1P17405 629 aa12.54□□□□□ -0.4
SGCE-211ENST00000522045 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
SGCE-211ENST00000522045 POTECB2RU33 542 aa12.53□□□□□ -0.4
SGCE-211ENST00000522045 SMCPP49901 116 aaPredicted RBP12.53□□□□□ -0.4
SGCE-211ENST00000522045 PDE4DQ08499 809 aa12.53□□□□□ -0.4
SGCE-211ENST00000522045 DESI1Q6ICB0 168 aa12.53□□□□□ -0.4
SGCE-211ENST00000522045 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
SGCE-211ENST00000522045 J3QL48 77 aa12.51□□□□□ -0.41
SGCE-211ENST00000522045 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
SGCE-211ENST00000522045 SPTLC1O15269 473 aa12.5□□□□□ -0.41
SGCE-211ENST00000522045 ZNF775Q96BV0 537 aaPredicted RBP12.5□□□□□ -0.41
SGCE-211ENST00000522045 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
SGCE-211ENST00000522045 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
SGCE-211ENST00000522045 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
SGCE-211ENST00000522045 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
SGCE-211ENST00000522045 RIC3Q7Z5B4 369 aa12.48□□□□□ -0.41
SGCE-211ENST00000522045 DACH1Q9UI36 760 aa12.48□□□□□ -0.41
SGCE-211ENST00000522045 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
SGCE-211ENST00000522045 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
SGCE-211ENST00000522045 HRCP23327 699 aa12.46□□□□□ -0.41
SGCE-211ENST00000522045 PRPF38BQ5VTL8 546 aaKnown RBP12.46□□□□□ -0.41
SGCE-211ENST00000522045 SH3BP2P78314 561 aa12.45□□□□□ -0.42
SGCE-211ENST00000522045 CFAP99D6REC4 459 aa12.44□□□□□ -0.42
SGCE-211ENST00000522045 ALDH1A1P00352 501 aa12.44□□□□□ -0.42
SGCE-211ENST00000522045 HPS1Q92902 700 aa12.44□□□□□ -0.42
SGCE-211ENST00000522045 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
SGCE-211ENST00000522045 LINC01559Q495D7 138 aa12.43□□□□□ -0.42
SGCE-211ENST00000522045 MYSM1Q5VVJ2 828 aa12.43□□□□□ -0.42
SGCE-211ENST00000522045 LYPD8Q6UX82 237 aa12.43□□□□□ -0.42
SGCE-211ENST00000522045 GMPR2Q9P2T1 348 aaKnown RBP12.43□□□□□ -0.42
SGCE-211ENST00000522045 SIAH2O43255 324 aa12.42□□□□□ -0.42
SGCE-211ENST00000522045 BAP1Q92560 729 aa12.42□□□□□ -0.42
SGCE-211ENST00000522045 C11orf95C9JLR9 678 aaPredicted RBP12.41□□□□□ -0.42
SGCE-211ENST00000522045 CTHP32929 405 aa12.41□□□□□ -0.42
SGCE-211ENST00000522045 CABLES1Q8TDN4 633 aa12.41□□□□□ -0.42
SGCE-211ENST00000522045 ZNF511Q8NB15 262 aa12.4□□□□□ -0.42
SGCE-211ENST00000522045 LIMD1Q9UGP4 676 aa12.4□□□□□ -0.42
SGCE-211ENST00000522045 TUSC1Q2TAM9 212 aa12.39□□□□□ -0.43
SGCE-211ENST00000522045 ATP13A2Q9NQ11 1180 aa12.39□□□□□ -0.43
SGCE-211ENST00000522045 WASF2Q9Y6W5 498 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms