RNA–Protein interactions for RNA: ENST00000521664.1

NDRG1-220, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-220ENST00000521664 DCAF11Q8TEB1 546 aa24.96■■□□□ 1.59
NDRG1-220ENST00000521664 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
NDRG1-220ENST00000521664 NUTM2BA6NNL0 878 aaPredicted RBP24.95■■□□□ 1.58
NDRG1-220ENST00000521664 NUTM2EB1AL46 878 aaPredicted RBP24.95■■□□□ 1.58
NDRG1-220ENST00000521664 NUTM2AQ8IVF1 878 aaPredicted RBP24.95■■□□□ 1.58
NDRG1-220ENST00000521664 NHSL1Q5SYE7 1610 aa24.94■■□□□ 1.58
NDRG1-220ENST00000521664 SIRT1Q96EB6 747 aa24.94■■□□□ 1.58
NDRG1-220ENST00000521664 STAC3Q96MF2 364 aa24.94■■□□□ 1.58
NDRG1-220ENST00000521664 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
NDRG1-220ENST00000521664 POTEAQ6S8J7 498 aa24.93■■□□□ 1.58
NDRG1-220ENST00000521664 SHPRHQ149N8 1683 aa24.93■■□□□ 1.58
NDRG1-220ENST00000521664 PLEKHH1Q9ULM0 1364 aa24.92■■□□□ 1.58
NDRG1-220ENST00000521664 LAMC1P11047 1609 aa24.9■■□□□ 1.58
NDRG1-220ENST00000521664 CDC42BPGQ6DT37 1551 aa24.9■■□□□ 1.58
NDRG1-220ENST00000521664 NUTM2FA1L443 756 aa24.9■■□□□ 1.58
NDRG1-220ENST00000521664 KNDC1Q76NI1 1749 aa24.89■■□□□ 1.58
NDRG1-220ENST00000521664 POGKQ9P215 609 aa24.89■■□□□ 1.58
NDRG1-220ENST00000521664 LRP6O75581 1613 aa24.89■■□□□ 1.57
NDRG1-220ENST00000521664 ZNF772Q68DY9 489 aaPredicted RBP24.87■■□□□ 1.57
NDRG1-220ENST00000521664 PRAM1Q96QH2 718 aa24.87■■□□□ 1.57
NDRG1-220ENST00000521664 SOS2Q07890 1332 aaPredicted RBP24.86■■□□□ 1.57
NDRG1-220ENST00000521664 NPHP3Q7Z494 1330 aa24.86■■□□□ 1.57
NDRG1-220ENST00000521664 SAFB2Q14151 953 aaKnown RBP eCLIP24.86■■□□□ 1.57
NDRG1-220ENST00000521664 PNPLA6Q8IY17 1366 aa24.85■■□□□ 1.57
NDRG1-220ENST00000521664 FOXO3O43524 673 aa24.83■■□□□ 1.57
NDRG1-220ENST00000521664 TRAK1Q9UPV9 953 aa24.83■■□□□ 1.57
NDRG1-220ENST00000521664 C8orf37Q96NL8 207 aa24.79■■□□□ 1.56
NDRG1-220ENST00000521664 DLC1Q96QB1 1528 aa24.78■■□□□ 1.56
NDRG1-220ENST00000521664 XPCQ01831 940 aaPredicted RBP24.78■■□□□ 1.56
NDRG1-220ENST00000521664 ADAMTS2O95450 1211 aa24.77■■□□□ 1.56
NDRG1-220ENST00000521664 AFF2P51816 1311 aa24.77■■□□□ 1.56
NDRG1-220ENST00000521664 ADGRB1O14514 1584 aa24.76■■□□□ 1.55
NDRG1-220ENST00000521664 FMN2Q9NZ56 1722 aa24.75■■□□□ 1.55
NDRG1-220ENST00000521664 NGLY1Q96IV0 654 aa24.75■■□□□ 1.55
NDRG1-220ENST00000521664 PHF8Q9UPP1 1060 aa24.74■■□□□ 1.55
NDRG1-220ENST00000521664 HIRIP3Q9BW71 556 aaPredicted RBP24.73■■□□□ 1.55
NDRG1-220ENST00000521664 PXDNQ92626 1479 aa24.72■■□□□ 1.55
NDRG1-220ENST00000521664 MINK1Q8N4C8 1332 aaPredicted RBP24.72■■□□□ 1.55
NDRG1-220ENST00000521664 RXRBP28702 533 aa24.72■■□□□ 1.55
NDRG1-220ENST00000521664 KRT28Q7Z3Y7 464 aa24.72■■□□□ 1.55
NDRG1-220ENST00000521664 PSME1Q06323 249 aa24.71■■□□□ 1.55
NDRG1-220ENST00000521664 KIF1AQ12756 1690 aa24.69■■□□□ 1.54
NDRG1-220ENST00000521664 QTRT2Q9H974 415 aaKnown RBP24.68■■□□□ 1.54
NDRG1-220ENST00000521664 EIF3AQ14152 1382 aaKnown RBP24.67■■□□□ 1.54
NDRG1-220ENST00000521664 WASLO00401 505 aaPredicted RBP24.66■■□□□ 1.54
NDRG1-220ENST00000521664 PMFBP1Q8TBY8 1022 aa24.66■■□□□ 1.54
NDRG1-220ENST00000521664 ANKARQ7Z5J8 1434 aa24.66■■□□□ 1.54
NDRG1-220ENST00000521664 SPATA31A3Q5VYP0 1347 aa24.65■■□□□ 1.54
NDRG1-220ENST00000521664 COL22A1Q8NFW1 1626 aaPredicted RBP24.64■■□□□ 1.54
NDRG1-220ENST00000521664 NEUROD1Q13562 356 aa24.64■■□□□ 1.54
NDRG1-220ENST00000521664 USP21Q9UK80 565 aa24.64■■□□□ 1.54
NDRG1-220ENST00000521664 RGPD8O14715 1765 aaPredicted RBP24.64■■□□□ 1.53
NDRG1-220ENST00000521664 ADGRB2O60241 1585 aa24.63■■□□□ 1.53
NDRG1-220ENST00000521664 LMOD2Q6P5Q4 547 aa24.63■■□□□ 1.53
NDRG1-220ENST00000521664 SIN3AQ96ST3 1273 aa24.63■■□□□ 1.53
NDRG1-220ENST00000521664 HAP1P54257 671 aaPredicted RBP24.62■■□□□ 1.53
NDRG1-220ENST00000521664 RBM6P78332 1123 aaKnown RBP24.62■■□□□ 1.53
NDRG1-220ENST00000521664 NBPF1Q3BBV0 1214 aa24.61■■□□□ 1.53
NDRG1-220ENST00000521664 L3MBTL2Q969R5 705 aa24.61■■□□□ 1.53
NDRG1-220ENST00000521664 FNBP4Q8N3X1 1017 aaPredicted RBP24.6■■□□□ 1.53
NDRG1-220ENST00000521664 SBNO1A3KN83 1393 aa24.59■■□□□ 1.53
NDRG1-220ENST00000521664 KIAA1210Q9ULL0 1709 aa24.59■■□□□ 1.53
NDRG1-220ENST00000521664 TRPC5Q9UL62 973 aaPredicted RBP24.59■■□□□ 1.53
NDRG1-220ENST00000521664 TNS3Q68CZ2 1445 aa24.59■■□□□ 1.53
NDRG1-220ENST00000521664 GPRASP1Q5JY77 1395 aa24.58■■□□□ 1.53
NDRG1-220ENST00000521664 PLEKHG5O94827 1062 aa24.58■■□□□ 1.53
NDRG1-220ENST00000521664 NGDNQ8NEJ9 315 aaKnown RBP24.58■■□□□ 1.53
NDRG1-220ENST00000521664 PRR36Q9H6K5 1346 aa24.58■■□□□ 1.52
NDRG1-220ENST00000521664 TULP4Q9NRJ4 1543 aa24.57■■□□□ 1.52
NDRG1-220ENST00000521664 ARHGEF28Q8N1W1 1705 aaKnown RBP24.57■■□□□ 1.52
NDRG1-220ENST00000521664 CDK19Q9BWU1 502 aa24.56■■□□□ 1.52
NDRG1-220ENST00000521664 USP32Q8NFA0 1604 aa24.56■■□□□ 1.52
NDRG1-220ENST00000521664 CDK12Q9NYV4 1490 aaPredicted RBP24.56■■□□□ 1.52
NDRG1-220ENST00000521664 ARHGEF10O15013 1369 aa24.55■■□□□ 1.52
NDRG1-220ENST00000521664 NUDT16Q96DE0 195 aaKnown RBP24.55■■□□□ 1.52
NDRG1-220ENST00000521664 TRIM26Q12899 539 aaPredicted RBP24.54■■□□□ 1.52
NDRG1-220ENST00000521664 CABLES1Q8TDN4 633 aa24.52■■□□□ 1.52
NDRG1-220ENST00000521664 CENPJQ9HC77 1338 aaPredicted RBP24.51■■□□□ 1.51
NDRG1-220ENST00000521664 PAK3O75914 559 aaPredicted RBP24.5■■□□□ 1.51
NDRG1-220ENST00000521664 MARF1Q9Y4F3 1742 aaKnown RBP24.48■■□□□ 1.51
NDRG1-220ENST00000521664 CCDC61Q9Y6R9 512 aa24.48■■□□□ 1.51
NDRG1-220ENST00000521664 BCL9LQ86UU0 1499 aa24.47■■□□□ 1.51
NDRG1-220ENST00000521664 ATRNO75882 1429 aa24.47■■□□□ 1.51
NDRG1-220ENST00000521664 SRPK2P78362 688 aaKnown RBP24.47■■□□□ 1.51
NDRG1-220ENST00000521664 ATP7BP35670 1465 aa24.46■■□□□ 1.51
NDRG1-220ENST00000521664 RGS12O14924 1447 aa24.46■■□□□ 1.51
NDRG1-220ENST00000521664 UNC5CLQ8IV45 518 aa24.46■■□□□ 1.51
NDRG1-220ENST00000521664 UPF1Q92900 1129 aaKnown RBP eCLIP24.46■■□□□ 1.51
NDRG1-220ENST00000521664 GJD4Q96KN9 370 aaPredicted RBP24.44■■□□□ 1.5
NDRG1-220ENST00000521664 ITSN1Q15811 1721 aa24.44■■□□□ 1.5
NDRG1-220ENST00000521664 ROCK2O75116 1388 aaKnown RBP24.43■■□□□ 1.5
NDRG1-220ENST00000521664 SLIT2O94813 1529 aa24.41■■□□□ 1.5
NDRG1-220ENST00000521664 ACEP12821 1306 aa24.41■■□□□ 1.5
NDRG1-220ENST00000521664 PLEKHG3A1L390 1219 aa24.41■■□□□ 1.5
NDRG1-220ENST00000521664 TRPM3Q9HCF6 1732 aaPredicted RBP24.41■■□□□ 1.5
NDRG1-220ENST00000521664 NBPF8Q3BBV2 869 aa24.4■■□□□ 1.5
NDRG1-220ENST00000521664 CABP2Q9NPB3 220 aa24.4■■□□□ 1.5
NDRG1-220ENST00000521664 TONSLQ96HA7 1378 aa24.39■■□□□ 1.49
NDRG1-220ENST00000521664 FAM83GA6ND36 823 aa24.38■■□□□ 1.49
NDRG1-220ENST00000521664 CCDC9Q9Y3X0 531 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms