RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 IFT172Q9UG01 1749 aa30.12■■■□□ 2.41
SNHG6-203ENST00000520944 TECPR2O15040 1411 aa30.12■■■□□ 2.41
SNHG6-203ENST00000520944 NHSL1Q5SYE7 1610 aa30.11■■■□□ 2.41
SNHG6-203ENST00000520944 ESCO1Q5FWF5 840 aa30.1■■■□□ 2.41
SNHG6-203ENST00000520944 CFAP70Q5T0N1 1121 aa30.1■■■□□ 2.41
SNHG6-203ENST00000520944 YTHDC2Q9H6S0 1430 aaKnown RBP30.09■■■□□ 2.41
SNHG6-203ENST00000520944 DHX57Q6P158 1386 aaKnown RBP30.08■■■□□ 2.41
SNHG6-203ENST00000520944 SIRT1Q96EB6 747 aa30.08■■■□□ 2.41
SNHG6-203ENST00000520944 MYOM2P54296 1465 aa30.06■■■□□ 2.4
SNHG6-203ENST00000520944 SOS2Q07890 1332 aaPredicted RBP30.06■■■□□ 2.4
SNHG6-203ENST00000520944 PNPLA6Q8IY17 1366 aa30.05■■■□□ 2.4
SNHG6-203ENST00000520944 NRXN1Q9ULB1 1477 aa30.05■■■□□ 2.4
SNHG6-203ENST00000520944 PLEKHH1Q9ULM0 1364 aa30.04■■■□□ 2.4
SNHG6-203ENST00000520944 NUTM2FA1L443 756 aa30.04■■■□□ 2.4
SNHG6-203ENST00000520944 KDM2AQ9Y2K7 1162 aa30.03■■■□□ 2.4
SNHG6-203ENST00000520944 CDC42BPGQ6DT37 1551 aa30.03■■■□□ 2.4
SNHG6-203ENST00000520944 NPHP3Q7Z494 1330 aa30.02■■■□□ 2.4
SNHG6-203ENST00000520944 DCAF11Q8TEB1 546 aa30.02■■■□□ 2.4
SNHG6-203ENST00000520944 STAC3Q96MF2 364 aa30■■■□□ 2.39
SNHG6-203ENST00000520944 C8orf37Q96NL8 207 aa30■■■□□ 2.39
SNHG6-203ENST00000520944 AFF2P51816 1311 aa29.99■■■□□ 2.39
SNHG6-203ENST00000520944 FOXO3O43524 673 aa29.99■■■□□ 2.39
SNHG6-203ENST00000520944 PRAM1Q96QH2 718 aa29.97■■■□□ 2.39
SNHG6-203ENST00000520944 POGKQ9P215 609 aa29.97■■■□□ 2.39
SNHG6-203ENST00000520944 KNDC1Q76NI1 1749 aa29.96■■■□□ 2.39
SNHG6-203ENST00000520944 ADAMTS2O95450 1211 aa29.96■■■□□ 2.39
SNHG6-203ENST00000520944 RXRBP28702 533 aa29.96■■■□□ 2.39
SNHG6-203ENST00000520944 LAMC1P11047 1609 aa29.96■■■□□ 2.39
SNHG6-203ENST00000520944 SAFB2Q14151 953 aaKnown RBP eCLIP29.95■■■□□ 2.39
SNHG6-203ENST00000520944 NGLY1Q96IV0 654 aa29.94■■■□□ 2.38
SNHG6-203ENST00000520944 XPCQ01831 940 aaPredicted RBP29.93■■■□□ 2.38
SNHG6-203ENST00000520944 TRAK1Q9UPV9 953 aa29.9■■■□□ 2.38
SNHG6-203ENST00000520944 QTRT2Q9H974 415 aaKnown RBP29.89■■■□□ 2.38
SNHG6-203ENST00000520944 PXDNQ92626 1479 aa29.86■■■□□ 2.37
SNHG6-203ENST00000520944 PHF8Q9UPP1 1060 aa29.85■■■□□ 2.37
SNHG6-203ENST00000520944 KRT28Q7Z3Y7 464 aa29.84■■■□□ 2.37
SNHG6-203ENST00000520944 DLC1Q96QB1 1528 aa29.84■■■□□ 2.37
SNHG6-203ENST00000520944 FMN2Q9NZ56 1722 aa29.82■■■□□ 2.36
SNHG6-203ENST00000520944 RBM6P78332 1123 aaKnown RBP29.82■■■□□ 2.36
SNHG6-203ENST00000520944 PSME1Q06323 249 aa29.82■■■□□ 2.36
SNHG6-203ENST00000520944 ADGRB1O14514 1584 aa29.81■■■□□ 2.36
SNHG6-203ENST00000520944 USP21Q9UK80 565 aa29.81■■■□□ 2.36
SNHG6-203ENST00000520944 HIRIP3Q9BW71 556 aaPredicted RBP29.8■■■□□ 2.36
SNHG6-203ENST00000520944 SPATA31A3Q5VYP0 1347 aa29.78■■■□□ 2.36
SNHG6-203ENST00000520944 MINK1Q8N4C8 1332 aaPredicted RBP29.78■■■□□ 2.36
SNHG6-203ENST00000520944 FNBP4Q8N3X1 1017 aaPredicted RBP29.78■■■□□ 2.36
SNHG6-203ENST00000520944 CDK12Q9NYV4 1490 aaPredicted RBP29.76■■■□□ 2.35
SNHG6-203ENST00000520944 COL22A1Q8NFW1 1626 aaPredicted RBP29.76■■■□□ 2.35
SNHG6-203ENST00000520944 KIF1AQ12756 1690 aa29.76■■■□□ 2.35
SNHG6-203ENST00000520944 TRPC5Q9UL62 973 aaPredicted RBP29.75■■■□□ 2.35
SNHG6-203ENST00000520944 PMFBP1Q8TBY8 1022 aa29.74■■■□□ 2.35
SNHG6-203ENST00000520944 ANKARQ7Z5J8 1434 aa29.73■■■□□ 2.35
SNHG6-203ENST00000520944 EIF3AQ14152 1382 aaKnown RBP29.73■■■□□ 2.35
SNHG6-203ENST00000520944 WASLO00401 505 aaPredicted RBP29.72■■■□□ 2.35
SNHG6-203ENST00000520944 HAP1P54257 671 aaPredicted RBP29.71■■■□□ 2.35
SNHG6-203ENST00000520944 LMOD2Q6P5Q4 547 aa29.71■■■□□ 2.35
SNHG6-203ENST00000520944 UPF1Q92900 1129 aaKnown RBP eCLIP29.69■■■□□ 2.34
SNHG6-203ENST00000520944 SBNO1A3KN83 1393 aa29.67■■■□□ 2.34
SNHG6-203ENST00000520944 TNS3Q68CZ2 1445 aa29.67■■■□□ 2.34
SNHG6-203ENST00000520944 ADGRB2O60241 1585 aa29.67■■■□□ 2.34
SNHG6-203ENST00000520944 PLEKHG5O94827 1062 aa29.65■■■□□ 2.34
SNHG6-203ENST00000520944 RGPD8O14715 1765 aaPredicted RBP29.64■■■□□ 2.34
SNHG6-203ENST00000520944 RGS12O14924 1447 aa29.64■■■□□ 2.34
SNHG6-203ENST00000520944 ARHGEF10O15013 1369 aa29.64■■■□□ 2.33
SNHG6-203ENST00000520944 GPRASP1Q5JY77 1395 aa29.64■■■□□ 2.33
SNHG6-203ENST00000520944 PRR36Q9H6K5 1346 aa29.63■■■□□ 2.33
SNHG6-203ENST00000520944 NGDNQ8NEJ9 315 aaKnown RBP29.62■■■□□ 2.33
SNHG6-203ENST00000520944 CABLES1Q8TDN4 633 aa29.62■■■□□ 2.33
SNHG6-203ENST00000520944 ATRNO75882 1429 aa29.62■■■□□ 2.33
SNHG6-203ENST00000520944 BCL9LQ86UU0 1499 aa29.61■■■□□ 2.33
SNHG6-203ENST00000520944 TULP4Q9NRJ4 1543 aa29.61■■■□□ 2.33
SNHG6-203ENST00000520944 NBPF1Q3BBV0 1214 aa29.6■■■□□ 2.33
SNHG6-203ENST00000520944 UNC5CLQ8IV45 518 aa29.59■■■□□ 2.33
SNHG6-203ENST00000520944 USP32Q8NFA0 1604 aa29.59■■■□□ 2.33
SNHG6-203ENST00000520944 NUDT16Q96DE0 195 aaKnown RBP29.58■■■□□ 2.33
SNHG6-203ENST00000520944 GJD4Q96KN9 370 aaPredicted RBP29.58■■■□□ 2.33
SNHG6-203ENST00000520944 CDK19Q9BWU1 502 aa29.58■■■□□ 2.33
SNHG6-203ENST00000520944 L3MBTL2Q969R5 705 aa29.56■■■□□ 2.32
SNHG6-203ENST00000520944 PAK3O75914 559 aaPredicted RBP29.55■■■□□ 2.32
SNHG6-203ENST00000520944 NEUROD1Q13562 356 aa29.55■■■□□ 2.32
SNHG6-203ENST00000520944 SIN3AQ96ST3 1273 aa29.55■■■□□ 2.32
SNHG6-203ENST00000520944 ARHGEF28Q8N1W1 1705 aaKnown RBP29.53■■■□□ 2.32
SNHG6-203ENST00000520944 KIAA1210Q9ULL0 1709 aa29.53■■■□□ 2.32
SNHG6-203ENST00000520944 MARF1Q9Y4F3 1742 aaKnown RBP29.52■■■□□ 2.32
SNHG6-203ENST00000520944 SLIT2O94813 1529 aa29.51■■■□□ 2.32
SNHG6-203ENST00000520944 CCDC61Q9Y6R9 512 aa29.5■■■□□ 2.31
SNHG6-203ENST00000520944 ATAD2Q6PL18 1390 aa29.5■■■□□ 2.31
SNHG6-203ENST00000520944 CENPJQ9HC77 1338 aaPredicted RBP29.48■■■□□ 2.31
SNHG6-203ENST00000520944 FAM83GA6ND36 823 aa29.47■■■□□ 2.31
SNHG6-203ENST00000520944 ATP7BP35670 1465 aa29.47■■■□□ 2.31
SNHG6-203ENST00000520944 CCDC9Q9Y3X0 531 aaKnown RBP29.46■■■□□ 2.31
SNHG6-203ENST00000520944 SRPK2P78362 688 aaKnown RBP29.45■■■□□ 2.31
SNHG6-203ENST00000520944 VPS72Q15906 364 aa29.44■■■□□ 2.3
SNHG6-203ENST00000520944 ACEP12821 1306 aa29.43■■■□□ 2.3
SNHG6-203ENST00000520944 RALGAPBQ86X10 1494 aa29.42■■■□□ 2.3
SNHG6-203ENST00000520944 PLEKHG3A1L390 1219 aa29.42■■■□□ 2.3
SNHG6-203ENST00000520944 NBPF8Q3BBV2 869 aa29.42■■■□□ 2.3
SNHG6-203ENST00000520944 TRPM3Q9HCF6 1732 aaPredicted RBP29.41■■■□□ 2.3
SNHG6-203ENST00000520944 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.4■■■□□ 2.3
SNHG6-203ENST00000520944 BTG4Q9NY30 223 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms