RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ANKLE1Q8NAG6 615 aa11.78□□□□□ -0.52
PABPC1-216ENST00000520868 SALL2Q9Y467 1007 aaPredicted RBP11.78□□□□□ -0.52
PABPC1-216ENST00000520868 HOXA2O43364 376 aa11.77□□□□□ -0.53
PABPC1-216ENST00000520868 SLC19A1P41440 591 aa11.77□□□□□ -0.53
PABPC1-216ENST00000520868 NUTM1Q86Y26 1132 aa11.77□□□□□ -0.53
PABPC1-216ENST00000520868 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.53
PABPC1-216ENST00000520868 Q3C1V9 767 aa11.76□□□□□ -0.53
PABPC1-216ENST00000520868 PDE4DQ08499 809 aa11.75□□□□□ -0.53
PABPC1-216ENST00000520868 GFRA3O60609 400 aa11.74□□□□□ -0.53
PABPC1-216ENST00000520868 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
PABPC1-216ENST00000520868 EIF4G1Q04637 1599 aaKnown RBP11.74□□□□□ -0.53
PABPC1-216ENST00000520868 FCF1Q9Y324 198 aaKnown RBP11.72□□□□□ -0.53
PABPC1-216ENST00000520868 MS4A1P11836 297 aa11.71□□□□□ -0.53
PABPC1-216ENST00000520868 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.53
PABPC1-216ENST00000520868 SPRYD7Q5W111 196 aa11.71□□□□□ -0.53
PABPC1-216ENST00000520868 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.53
PABPC1-216ENST00000520868 TRIM67Q6ZTA4 783 aa11.7□□□□□ -0.54
PABPC1-216ENST00000520868 BEGAINQ9BUH8 593 aa11.7□□□□□ -0.54
PABPC1-216ENST00000520868 LCE2BO14633 110 aa11.69□□□□□ -0.54
PABPC1-216ENST00000520868 NDUFV2P19404 249 aa11.69□□□□□ -0.54
PABPC1-216ENST00000520868 MSS51Q4VC12 460 aa11.69□□□□□ -0.54
PABPC1-216ENST00000520868 Q6ZNB5 142 aa11.69□□□□□ -0.54
PABPC1-216ENST00000520868 PCDHGC3Q9UN70 934 aa11.69□□□□□ -0.54
PABPC1-216ENST00000520868 MOXD2PA6NHM9 499 aa11.67□□□□□ -0.54
PABPC1-216ENST00000520868 USB1Q9BQ65 265 aaKnown RBP11.67□□□□□ -0.54
PABPC1-216ENST00000520868 PDZRN3Q9UPQ7 1066 aa11.67□□□□□ -0.54
PABPC1-216ENST00000520868 ZNF697Q5TEC3 545 aa11.66□□□□□ -0.54
PABPC1-216ENST00000520868 FDX1P10109 184 aa11.65□□□□□ -0.54
PABPC1-216ENST00000520868 ZNF598Q86UK7 904 aaKnown RBP11.65□□□□□ -0.54
PABPC1-216ENST00000520868 NRG2O14511 850 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-216ENST00000520868 MMP16P51512 607 aa11.63□□□□□ -0.55
PABPC1-216ENST00000520868 TNFRSF10AO00220 468 aa11.62□□□□□ -0.55
PABPC1-216ENST00000520868 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
PABPC1-216ENST00000520868 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
PABPC1-216ENST00000520868 GJA5P36382 358 aa11.61□□□□□ -0.55
PABPC1-216ENST00000520868 LAPTM4AQ15012 233 aa11.61□□□□□ -0.55
PABPC1-216ENST00000520868 C6orf229H3BNL8 230 aa11.59□□□□□ -0.55
PABPC1-216ENST00000520868 GDF9O60383 454 aa11.59□□□□□ -0.55
PABPC1-216ENST00000520868 RETREG3Q86VR2 466 aa11.59□□□□□ -0.55
PABPC1-216ENST00000520868 FOXC1Q12948 553 aa11.58□□□□□ -0.56
PABPC1-216ENST00000520868 PKD2L1Q9P0L9 805 aa11.58□□□□□ -0.56
PABPC1-216ENST00000520868 RPIAP49247 311 aa11.57□□□□□ -0.56
PABPC1-216ENST00000520868 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
PABPC1-216ENST00000520868 PCDHB15Q9Y5E8 787 aa11.57□□□□□ -0.56
PABPC1-216ENST00000520868 SPDYE5A6NIY4 337 aa11.56□□□□□ -0.56
PABPC1-216ENST00000520868 JUNDP17535 347 aa11.56□□□□□ -0.56
PABPC1-216ENST00000520868 RSBN1LQ6PCB5 846 aaPredicted RBP11.56□□□□□ -0.56
PABPC1-216ENST00000520868 SPTLC1O15269 473 aa11.55□□□□□ -0.56
PABPC1-216ENST00000520868 RSPH6AQ9H0K4 717 aa11.55□□□□□ -0.56
PABPC1-216ENST00000520868 TRAF7Q6Q0C0 670 aa11.54□□□□□ -0.56
PABPC1-216ENST00000520868 KDM4CQ9H3R0 1056 aa11.54□□□□□ -0.56
PABPC1-216ENST00000520868 PRR20EP86478 221 aa11.53□□□□□ -0.56
PABPC1-216ENST00000520868 PRR20CP86479 221 aa11.53□□□□□ -0.56
PABPC1-216ENST00000520868 PRR20DP86480 221 aa11.53□□□□□ -0.56
PABPC1-216ENST00000520868 PRR20BP86481 221 aa11.53□□□□□ -0.56
PABPC1-216ENST00000520868 PRR20AP86496 221 aa11.53□□□□□ -0.56
PABPC1-216ENST00000520868 MTMR2Q13614 643 aa11.53□□□□□ -0.56
PABPC1-216ENST00000520868 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
PABPC1-216ENST00000520868 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
PABPC1-216ENST00000520868 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-216ENST00000520868 CD2BP2O95400 341 aaKnown RBP11.52□□□□□ -0.57
PABPC1-216ENST00000520868 CSPP1Q1MSJ5 1256 aa11.52□□□□□ -0.57
PABPC1-216ENST00000520868 TPRNQ4KMQ1 711 aa11.52□□□□□ -0.57
PABPC1-216ENST00000520868 MYSM1Q5VVJ2 828 aa11.52□□□□□ -0.57
PABPC1-216ENST00000520868 GPBP1L1Q9HC44 474 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-216ENST00000520868 TRIM32Q13049 653 aa11.51□□□□□ -0.57
PABPC1-216ENST00000520868 PTCRAQ6ISU1 281 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-216ENST00000520868 PRR7Q8TB68 274 aa11.51□□□□□ -0.57
PABPC1-216ENST00000520868 CABLES1Q8TDN4 633 aa11.51□□□□□ -0.57
PABPC1-216ENST00000520868 LIMD1Q9UGP4 676 aa11.51□□□□□ -0.57
PABPC1-216ENST00000520868 PRPF38BQ5VTL8 546 aaKnown RBP11.5□□□□□ -0.57
PABPC1-216ENST00000520868 ZBTB3Q9H5J0 574 aa11.5□□□□□ -0.57
PABPC1-216ENST00000520868 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
PABPC1-216ENST00000520868 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
PABPC1-216ENST00000520868 FAM187AA6NFU0 413 aa11.48□□□□□ -0.57
PABPC1-216ENST00000520868 HRCP23327 699 aa11.48□□□□□ -0.57
PABPC1-216ENST00000520868 SKOR1P84550 965 aa11.48□□□□□ -0.57
PABPC1-216ENST00000520868 CFAP99D6REC4 459 aa11.47□□□□□ -0.57
PABPC1-216ENST00000520868 DESI1Q6ICB0 168 aa11.47□□□□□ -0.57
PABPC1-216ENST00000520868 CLK2P49760 499 aaKnown RBP11.46□□□□□ -0.57
PABPC1-216ENST00000520868 QPCTQ16769 361 aa11.46□□□□□ -0.57
PABPC1-216ENST00000520868 PKDCCQ504Y2 493 aa11.45□□□□□ -0.58
PABPC1-216ENST00000520868 FAM117AQ9C073 453 aa11.45□□□□□ -0.58
PABPC1-216ENST00000520868 TOR4AQ9NXH8 423 aa11.45□□□□□ -0.58
PABPC1-216ENST00000520868 MYT1Q01538 1121 aa11.44□□□□□ -0.58
PABPC1-216ENST00000520868 NEUROD2Q15784 382 aa11.44□□□□□ -0.58
PABPC1-216ENST00000520868 DGAT1O75907 488 aa11.43□□□□□ -0.58
PABPC1-216ENST00000520868 CCNYL3P0C7X3 344 aa11.43□□□□□ -0.58
PABPC1-216ENST00000520868 PTPRNQ16849 979 aa11.43□□□□□ -0.58
PABPC1-216ENST00000520868 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-216ENST00000520868 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-216ENST00000520868 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
PABPC1-216ENST00000520868 SH3D19Q5HYK7 790 aa11.42□□□□□ -0.58
PABPC1-216ENST00000520868 NUTM2DQ5VT03 806 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-216ENST00000520868 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-216ENST00000520868 MRGPRX2Q96LB1 330 aa11.42□□□□□ -0.58
PABPC1-216ENST00000520868 POLR3EQ9NVU0 708 aa11.42□□□□□ -0.58
PABPC1-216ENST00000520868 WNT7AO00755 349 aa11.41□□□□□ -0.58
PABPC1-216ENST00000520868 CYP4X1Q8N118 509 aa11.41□□□□□ -0.58
PABPC1-216ENST00000520868 ST8SIA5O15466 376 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms