RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 CABP2Q9NPB3 220 aa23.67■■□□□ 1.38
TSNARE1-205ENST00000520166 PIK3R4Q99570 1358 aa23.67■■□□□ 1.38
TSNARE1-205ENST00000520166 SBNO2Q9Y2G9 1366 aa23.67■■□□□ 1.38
TSNARE1-205ENST00000520166 FAM135BQ49AJ0 1406 aa23.66■■□□□ 1.38
TSNARE1-205ENST00000520166 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.64■■□□□ 1.38
TSNARE1-205ENST00000520166 CDK19Q9BWU1 502 aa23.63■■□□□ 1.37
TSNARE1-205ENST00000520166 STRCP1A6NGW2 1772 aa23.62■■□□□ 1.37
TSNARE1-205ENST00000520166 PTCH1Q13635 1447 aa23.61■■□□□ 1.37
TSNARE1-205ENST00000520166 EVC2Q86UK5 1308 aa23.61■■□□□ 1.37
TSNARE1-205ENST00000520166 ZNF335Q9H4Z2 1342 aaPredicted RBP23.59■■□□□ 1.37
TSNARE1-205ENST00000520166 SRPK2P78362 688 aaKnown RBP23.59■■□□□ 1.37
TSNARE1-205ENST00000520166 NUTM2FA1L443 756 aa23.58■■□□□ 1.37
TSNARE1-205ENST00000520166 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
TSNARE1-205ENST00000520166 WASLO00401 505 aaPredicted RBP23.57■■□□□ 1.36
TSNARE1-205ENST00000520166 SLC12A5Q9H2X9 1139 aa23.56■■□□□ 1.36
TSNARE1-205ENST00000520166 NWD1Q149M9 1564 aa23.56■■□□□ 1.36
TSNARE1-205ENST00000520166 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
TSNARE1-205ENST00000520166 CDCA8Q53HL2 280 aa23.54■■□□□ 1.36
TSNARE1-205ENST00000520166 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
TSNARE1-205ENST00000520166 PANK3Q9H999 370 aa23.54■■□□□ 1.36
TSNARE1-205ENST00000520166 SLC24A1O60721 1099 aa23.53■■□□□ 1.36
TSNARE1-205ENST00000520166 CNGB1Q14028 1251 aaPredicted RBP23.53■■□□□ 1.36
TSNARE1-205ENST00000520166 MYOM1P52179 1685 aa23.52■■□□□ 1.36
TSNARE1-205ENST00000520166 PRR36Q9H6K5 1346 aa23.52■■□□□ 1.36
TSNARE1-205ENST00000520166 MIER1Q8N108 512 aa23.5■■□□□ 1.35
TSNARE1-205ENST00000520166 NUDT16Q96DE0 195 aaKnown RBP23.48■■□□□ 1.35
TSNARE1-205ENST00000520166 CABP1Q9NZU7 370 aa23.48■■□□□ 1.35
TSNARE1-205ENST00000520166 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
TSNARE1-205ENST00000520166 NALCNQ8IZF0 1738 aa23.48■■□□□ 1.35
TSNARE1-205ENST00000520166 C14orf37Q86TY3 774 aa23.47■■□□□ 1.35
TSNARE1-205ENST00000520166 TMEM94Q12767 1356 aa23.47■■□□□ 1.35
TSNARE1-205ENST00000520166 PER1O15534 1290 aaPredicted RBP23.47■■□□□ 1.35
TSNARE1-205ENST00000520166 CARD14Q9BXL6 1004 aa23.47■■□□□ 1.35
TSNARE1-205ENST00000520166 ADGRB2O60241 1585 aa23.46■■□□□ 1.35
TSNARE1-205ENST00000520166 PUS7Q96PZ0 661 aaKnown RBP23.46■■□□□ 1.35
TSNARE1-205ENST00000520166 NKTRP30414 1462 aaKnown RBP23.45■■□□□ 1.34
TSNARE1-205ENST00000520166 ADGRL3Q9HAR2 1447 aa23.43■■□□□ 1.34
TSNARE1-205ENST00000520166 ATP7BP35670 1465 aa23.42■■□□□ 1.34
TSNARE1-205ENST00000520166 ATAD2Q6PL18 1390 aa23.42■■□□□ 1.34
TSNARE1-205ENST00000520166 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
TSNARE1-205ENST00000520166 LRRC7Q96NW7 1537 aa23.41■■□□□ 1.34
TSNARE1-205ENST00000520166 CD163L1Q9NR16 1453 aa23.4■■□□□ 1.34
TSNARE1-205ENST00000520166 RGPD8O14715 1765 aaPredicted RBP23.4■■□□□ 1.34
TSNARE1-205ENST00000520166 PPIP5K1Q6PFW1 1433 aa23.4■■□□□ 1.34
TSNARE1-205ENST00000520166 XIRP1Q702N8 1843 aaKnown RBP23.4■■□□□ 1.34
TSNARE1-205ENST00000520166 CCDC61Q9Y6R9 512 aa23.39■■□□□ 1.34
TSNARE1-205ENST00000520166 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
TSNARE1-205ENST00000520166 C19orf44Q9H6X5 657 aa23.38■■□□□ 1.33
TSNARE1-205ENST00000520166 A0A1W2PP64 1363 aa23.37■■□□□ 1.33
TSNARE1-205ENST00000520166 FMN2Q9NZ56 1722 aa23.36■■□□□ 1.33
TSNARE1-205ENST00000520166 CC2D1BQ5T0F9 858 aaKnown RBP23.35■■□□□ 1.33
TSNARE1-205ENST00000520166 CDC42BPGQ6DT37 1551 aa23.35■■□□□ 1.33
TSNARE1-205ENST00000520166 ANKRD36BQ8N2N9 1353 aa23.34■■□□□ 1.33
TSNARE1-205ENST00000520166 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.33
TSNARE1-205ENST00000520166 ANP32CO43423 234 aa23.33■■□□□ 1.32
TSNARE1-205ENST00000520166 AMER1Q5JTC6 1135 aaPredicted RBP23.33■■□□□ 1.32
TSNARE1-205ENST00000520166 ORAI2Q96SN7 254 aa23.33■■□□□ 1.32
TSNARE1-205ENST00000520166 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.32
TSNARE1-205ENST00000520166 ACEP12821 1306 aa23.31■■□□□ 1.32
TSNARE1-205ENST00000520166 PLEKHG3A1L390 1219 aa23.31■■□□□ 1.32
TSNARE1-205ENST00000520166 PRKRIP1Q9H875 184 aaPredicted RBP23.31■■□□□ 1.32
TSNARE1-205ENST00000520166 TOPAZ1Q8N9V7 1692 aa23.31■■□□□ 1.32
TSNARE1-205ENST00000520166 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
TSNARE1-205ENST00000520166 ATF3P18847 181 aa23.3■■□□□ 1.32
TSNARE1-205ENST00000520166 ESCO1Q5FWF5 840 aa23.3■■□□□ 1.32
TSNARE1-205ENST00000520166 TERF2IPQ9NYB0 399 aa23.3■■□□□ 1.32
TSNARE1-205ENST00000520166 NINLQ9Y2I6 1382 aa23.3■■□□□ 1.32
TSNARE1-205ENST00000520166 CPSF1Q10570 1443 aaKnown RBP23.29■■□□□ 1.32
TSNARE1-205ENST00000520166 NCOA3Q9Y6Q9 1424 aa23.29■■□□□ 1.32
TSNARE1-205ENST00000520166 HDGFL2Q7Z4V5 671 aaPredicted RBP23.28■■□□□ 1.32
TSNARE1-205ENST00000520166 ANKARQ7Z5J8 1434 aa23.28■■□□□ 1.32
TSNARE1-205ENST00000520166 MSH6P52701 1360 aa23.28■■□□□ 1.32
TSNARE1-205ENST00000520166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.28■■□□□ 1.32
TSNARE1-205ENST00000520166 KTN1Q86UP2 1357 aaKnown RBP23.27■■□□□ 1.32
TSNARE1-205ENST00000520166 PHF8Q9UPP1 1060 aa23.26■■□□□ 1.31
TSNARE1-205ENST00000520166 MST1RQ04912 1400 aa23.26■■□□□ 1.31
TSNARE1-205ENST00000520166 C1orf167Q5SNV9 1468 aa23.26■■□□□ 1.31
TSNARE1-205ENST00000520166 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
TSNARE1-205ENST00000520166 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
TSNARE1-205ENST00000520166 ZRANB1Q9UGI0 708 aa23.25■■□□□ 1.31
TSNARE1-205ENST00000520166 DDX17Q92841 729 aaKnown RBP23.24■■□□□ 1.31
TSNARE1-205ENST00000520166 CADPS2Q86UW7 1296 aa23.23■■□□□ 1.31
TSNARE1-205ENST00000520166 FYB1O15117 783 aa23.22■■□□□ 1.31
TSNARE1-205ENST00000520166 XPCQ01831 940 aaPredicted RBP23.22■■□□□ 1.31
TSNARE1-205ENST00000520166 GGNBP2Q9H3C7 697 aa23.22■■□□□ 1.31
TSNARE1-205ENST00000520166 POLR3AO14802 1390 aaPredicted RBP23.21■■□□□ 1.31
TSNARE1-205ENST00000520166 AKAP12Q02952 1782 aa23.21■■□□□ 1.31
TSNARE1-205ENST00000520166 FOXO3O43524 673 aa23.21■■□□□ 1.31
TSNARE1-205ENST00000520166 NME9Q86XW9 330 aa23.21■■□□□ 1.31
TSNARE1-205ENST00000520166 DCCP43146 1447 aa23.21■■□□□ 1.31
TSNARE1-205ENST00000520166 ITSN1Q15811 1721 aa23.2■■□□□ 1.3
TSNARE1-205ENST00000520166 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
TSNARE1-205ENST00000520166 TNNT2P45379 298 aaPredicted RBP23.19■■□□□ 1.3
TSNARE1-205ENST00000520166 SLAIN2Q9P270 581 aa23.19■■□□□ 1.3
TSNARE1-205ENST00000520166 CGNL1Q0VF96 1302 aa23.19■■□□□ 1.3
TSNARE1-205ENST00000520166 PARD3Q8TEW0 1356 aa23.19■■□□□ 1.3
TSNARE1-205ENST00000520166 USP6P35125 1406 aa23.19■■□□□ 1.3
TSNARE1-205ENST00000520166 MON2Q7Z3U7 1717 aa23.17■■□□□ 1.3
TSNARE1-205ENST00000520166 TTC21BQ7Z4L5 1316 aa23.17■■□□□ 1.3
TSNARE1-205ENST00000520166 FBLN1P23142 703 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms