RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 RGS3P49796 1198 aa14.65□□□□□ -0.06
NUDCD1-203ENST00000519607 AAMPQ13685 434 aa14.65□□□□□ -0.06
NUDCD1-203ENST00000519607 CFAP53Q96M91 514 aa14.65□□□□□ -0.06
NUDCD1-203ENST00000519607 ZC3H13Q5T200 1668 aaKnown RBP14.65□□□□□ -0.06
NUDCD1-203ENST00000519607 C8orf34Q49A92 452 aa14.64□□□□□ -0.07
NUDCD1-203ENST00000519607 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
NUDCD1-203ENST00000519607 USP32Q8NFA0 1604 aa14.63□□□□□ -0.07
NUDCD1-203ENST00000519607 GGT6Q6P531 493 aa14.62□□□□□ -0.07
NUDCD1-203ENST00000519607 NPATQ14207 1427 aa14.62□□□□□ -0.07
NUDCD1-203ENST00000519607 WDR63Q8IWG1 891 aa14.62□□□□□ -0.07
NUDCD1-203ENST00000519607 CLUAP1Q96AJ1 413 aa14.62□□□□□ -0.07
NUDCD1-203ENST00000519607 SLC12A5Q9H2X9 1139 aa14.62□□□□□ -0.07
NUDCD1-203ENST00000519607 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
NUDCD1-203ENST00000519607 SHPRHQ149N8 1683 aa14.61□□□□□ -0.07
NUDCD1-203ENST00000519607 MLH3Q9UHC1 1453 aa14.61□□□□□ -0.07
NUDCD1-203ENST00000519607 VIRMAQ69YN4 1812 aaKnown RBP14.6□□□□□ -0.07
NUDCD1-203ENST00000519607 EVC2Q86UK5 1308 aa14.6□□□□□ -0.07
NUDCD1-203ENST00000519607 TNNT2P45379 298 aaPredicted RBP14.6□□□□□ -0.07
NUDCD1-203ENST00000519607 NEUROD2Q15784 382 aa14.6□□□□□ -0.07
NUDCD1-203ENST00000519607 TCP11L2Q8N4U5 519 aa14.6□□□□□ -0.07
NUDCD1-203ENST00000519607 DMRT2Q9Y5R5 561 aa14.6□□□□□ -0.07
NUDCD1-203ENST00000519607 ADGRB1O14514 1584 aa14.6□□□□□ -0.07
NUDCD1-203ENST00000519607 HECW2Q9P2P5 1572 aa14.6□□□□□ -0.07
NUDCD1-203ENST00000519607 VGFO15240 615 aaPredicted RBP14.59□□□□□ -0.07
NUDCD1-203ENST00000519607 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
NUDCD1-203ENST00000519607 PMFBP1Q8TBY8 1022 aa14.59□□□□□ -0.07
NUDCD1-203ENST00000519607 NSD2O96028 1365 aa14.59□□□□□ -0.07
NUDCD1-203ENST00000519607 POGZQ7Z3K3 1410 aa14.59□□□□□ -0.07
NUDCD1-203ENST00000519607 CCDC27Q2M243 656 aa14.59□□□□□ -0.07
NUDCD1-203ENST00000519607 CD109Q6YHK3 1445 aa14.59□□□□□ -0.07
NUDCD1-203ENST00000519607 FRAT1Q92837 279 aaPredicted RBP14.58□□□□□ -0.08
NUDCD1-203ENST00000519607 COG6Q9Y2V7 657 aa14.58□□□□□ -0.08
NUDCD1-203ENST00000519607 MTHFSP49914 203 aa14.58□□□□□ -0.08
NUDCD1-203ENST00000519607 TMEM132EQ6IEE7 984 aa14.58□□□□□ -0.08
NUDCD1-203ENST00000519607 IGHDP01880 384 aa14.57□□□□□ -0.08
NUDCD1-203ENST00000519607 MYH16Q9H6N6 1097 aa14.57□□□□□ -0.08
NUDCD1-203ENST00000519607 RARSP54136 660 aaKnown RBP14.57□□□□□ -0.08
NUDCD1-203ENST00000519607 PANK1Q8TE04 598 aa14.57□□□□□ -0.08
NUDCD1-203ENST00000519607 IQSEC2Q5JU85 1478 aa14.56□□□□□ -0.08
NUDCD1-203ENST00000519607 ANKRD36BQ8N2N9 1353 aa14.56□□□□□ -0.08
NUDCD1-203ENST00000519607 NFKBIBQ15653 356 aa14.55□□□□□ -0.08
NUDCD1-203ENST00000519607 RRP7AQ9Y3A4 280 aaKnown RBP14.55□□□□□ -0.08
NUDCD1-203ENST00000519607 GLI2P10070 1586 aa14.55□□□□□ -0.08
NUDCD1-203ENST00000519607 ABCC3O15438 1527 aa14.55□□□□□ -0.08
NUDCD1-203ENST00000519607 CAMSAP1Q5T5Y3 1602 aa14.55□□□□□ -0.08
NUDCD1-203ENST00000519607 FRMPD1Q5SYB0 1578 aa14.55□□□□□ -0.08
NUDCD1-203ENST00000519607 SLC4A3P48751 1232 aa14.55□□□□□ -0.08
NUDCD1-203ENST00000519607 ARHGEF28Q8N1W1 1705 aaKnown RBP14.54□□□□□ -0.08
NUDCD1-203ENST00000519607 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
NUDCD1-203ENST00000519607 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
NUDCD1-203ENST00000519607 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
NUDCD1-203ENST00000519607 U2AF1L5P0DN76 240 aaPredicted RBP14.53□□□□□ -0.08
NUDCD1-203ENST00000519607 U2AF1Q01081 240 aaKnown RBP eCLIP14.53□□□□□ -0.08
NUDCD1-203ENST00000519607 CT47B1P0C2W7 299 aaPredicted RBP14.52□□□□□ -0.08
NUDCD1-203ENST00000519607 BECN1Q14457 450 aa14.52□□□□□ -0.08
NUDCD1-203ENST00000519607 GSE1Q14687 1217 aa14.52□□□□□ -0.08
NUDCD1-203ENST00000519607 RWDD1Q9H446 243 aaPredicted RBP14.52□□□□□ -0.08
NUDCD1-203ENST00000519607 ZMYM3Q14202 1370 aa14.52□□□□□ -0.09
NUDCD1-203ENST00000519607 UPF2Q9HAU5 1272 aaKnown RBP14.52□□□□□ -0.09
NUDCD1-203ENST00000519607 PIK3C2BO00750 1634 aa14.51□□□□□ -0.09
NUDCD1-203ENST00000519607 SENP3Q9H4L4 574 aaPredicted RBP14.5□□□□□ -0.09
NUDCD1-203ENST00000519607 NEXMIFQ5QGS0 1516 aa14.5□□□□□ -0.09
NUDCD1-203ENST00000519607 TULP4Q9NRJ4 1543 aa14.49□□□□□ -0.09
NUDCD1-203ENST00000519607 NEO1Q92859 1461 aa14.49□□□□□ -0.09
NUDCD1-203ENST00000519607 SLC52A1Q9NWF4 448 aa14.49□□□□□ -0.09
NUDCD1-203ENST00000519607 SIGLEC1Q9BZZ2 1709 aa14.49□□□□□ -0.09
NUDCD1-203ENST00000519607 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
NUDCD1-203ENST00000519607 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
NUDCD1-203ENST00000519607 FTSJ3Q8IY81 847 aaKnown RBP14.48□□□□□ -0.09
NUDCD1-203ENST00000519607 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
NUDCD1-203ENST00000519607 ARHGAP31Q2M1Z3 1444 aa14.48□□□□□ -0.09
NUDCD1-203ENST00000519607 NUTM2DQ5VT03 806 aaPredicted RBP14.48□□□□□ -0.09
NUDCD1-203ENST00000519607 PNNQ9H307 717 aaKnown RBP14.48□□□□□ -0.09
NUDCD1-203ENST00000519607 SRPK2P78362 688 aaKnown RBP14.47□□□□□ -0.09
NUDCD1-203ENST00000519607 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
NUDCD1-203ENST00000519607 ADGRB2O60241 1585 aa14.47□□□□□ -0.09
NUDCD1-203ENST00000519607 BCL2L13Q9BXK5 485 aa14.46□□□□□ -0.09
NUDCD1-203ENST00000519607 ABCC11Q96J66 1382 aa14.46□□□□□ -0.09
NUDCD1-203ENST00000519607 RLBP1P12271 317 aa14.46□□□□□ -0.09
NUDCD1-203ENST00000519607 MVPQ14764 893 aaKnown RBP14.46□□□□□ -0.09
NUDCD1-203ENST00000519607 PCDHB15Q9Y5E8 787 aa14.46□□□□□ -0.09
NUDCD1-203ENST00000519607 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.1
NUDCD1-203ENST00000519607 DZIP1LQ8IYY4 767 aaKnown RBP14.45□□□□□ -0.1
NUDCD1-203ENST00000519607 U2SURPO15042 1029 aaKnown RBP14.45□□□□□ -0.1
NUDCD1-203ENST00000519607 IDI1Q13907 227 aa14.44□□□□□ -0.1
NUDCD1-203ENST00000519607 SAFB2Q14151 953 aaKnown RBP eCLIP14.44□□□□□ -0.1
NUDCD1-203ENST00000519607 PDZRN3Q9UPQ7 1066 aa14.44□□□□□ -0.1
NUDCD1-203ENST00000519607 USP19O94966 1318 aa14.44□□□□□ -0.1
NUDCD1-203ENST00000519607 A0A1W2PP64 1363 aa14.44□□□□□ -0.1
NUDCD1-203ENST00000519607 RAPGEF3O95398 923 aa14.44□□□□□ -0.1
NUDCD1-203ENST00000519607 CYB5RLQ6IPT4 315 aa14.44□□□□□ -0.1
NUDCD1-203ENST00000519607 ANKRD26Q9UPS8 1709 aa14.43□□□□□ -0.1
NUDCD1-203ENST00000519607 DIP2CQ9Y2E4 1556 aa14.43□□□□□ -0.1
NUDCD1-203ENST00000519607 STK26Q9P289 416 aa14.43□□□□□ -0.1
NUDCD1-203ENST00000519607 IL16Q14005 1332 aa14.43□□□□□ -0.1
NUDCD1-203ENST00000519607 TMPOP42166 694 aaKnown RBP14.43□□□□□ -0.1
NUDCD1-203ENST00000519607 SMC4Q9NTJ3 1288 aa14.43□□□□□ -0.1
NUDCD1-203ENST00000519607 POGKQ9P215 609 aa14.43□□□□□ -0.1
NUDCD1-203ENST00000519607 FRAT2O75474 233 aaPredicted RBP14.42□□□□□ -0.1
NUDCD1-203ENST00000519607 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms