RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	ST20-MTHFS	A0A0A6YYL1	179 aa		15.19	■□□□□ 0.02
CHTF8-206	ENST00000519534	IQSEC2	Q5JU85	1478 aa		15.18	■□□□□ 0.02
CHTF8-206	ENST00000519534	CADPS2	Q86UW7	1296 aa		15.17	■□□□□ 0.02
CHTF8-206	ENST00000519534	TESK2	Q96S53	571 aa		15.17	■□□□□ 0.02
CHTF8-206	ENST00000519534	DCC	P43146	1447 aa		15.17	■□□□□ 0.02
CHTF8-206	ENST00000519534	PLEKHH1	Q9ULM0	1364 aa		15.16	■□□□□ 0.02
CHTF8-206	ENST00000519534	CDCA8	Q53HL2	280 aa		15.16	■□□□□ 0.02
CHTF8-206	ENST00000519534	CERK	Q8TCT0	537 aa		15.16	■□□□□ 0.02
CHTF8-206	ENST00000519534	KNDC1	Q76NI1	1749 aa		15.16	■□□□□ 0.02
CHTF8-206	ENST00000519534	MSH6	P52701	1360 aa		15.15	■□□□□ 0.02
CHTF8-206	ENST00000519534	WASL	O00401	505 aa	Predicted RBP	15.15	■□□□□ 0.02
CHTF8-206	ENST00000519534	HSPA5	P11021	654 aa	Known RBP	15.15	■□□□□ 0.02
CHTF8-206	ENST00000519534	ADGRL3	Q9HAR2	1447 aa		15.15	■□□□□ 0.02
CHTF8-206	ENST00000519534	ATF3	P18847	181 aa		15.14	■□□□□ 0.01
CHTF8-206	ENST00000519534	C14orf37	Q86TY3	774 aa		15.14	■□□□□ 0.01
CHTF8-206	ENST00000519534	EVC2	Q86UK5	1308 aa		15.14	■□□□□ 0.01
CHTF8-206	ENST00000519534	TMF1	P82094	1093 aa		15.13	■□□□□ 0.01
CHTF8-206	ENST00000519534	SAFB2	Q14151	953 aa	Known RBP eCLIP	15.11	■□□□□ 0.01
CHTF8-206	ENST00000519534	CDK19	Q9BWU1	502 aa		15.11	■□□□□ 0.01
CHTF8-206	ENST00000519534	MINK1	Q8N4C8	1332 aa	Predicted RBP	15.11	■□□□□ 0.01
CHTF8-206	ENST00000519534	STRCP1	A6NGW2	1772 aa		15.11	■□□□□ 0.01
CHTF8-206	ENST00000519534	TOM1	O60784	492 aa		15.1	■□□□□ 0.01
CHTF8-206	ENST00000519534	RBM33	Q96EV2	1170 aa	Known RBP	15.1	■□□□□ 0.01
CHTF8-206	ENST00000519534	SLAIN2	Q9P270	581 aa		15.09	■□□□□ 0.01
CHTF8-206	ENST00000519534	CCDC61	Q9Y6R9	512 aa		15.09	■□□□□ 0.01
CHTF8-206	ENST00000519534	ARHGEF28	Q8N1W1	1705 aa	Known RBP	15.08	■□□□□ 0
CHTF8-206	ENST00000519534	ANKAR	Q7Z5J8	1434 aa		15.08	■□□□□ 0
CHTF8-206	ENST00000519534	ADGRB2	O60241	1585 aa		15.07	■□□□□ 0
CHTF8-206	ENST00000519534	HIRIP3	Q9BW71	556 aa	Predicted RBP	15.07	■□□□□ 0
CHTF8-206	ENST00000519534	SRPK2	P78362	688 aa	Known RBP	15.06	■□□□□ 0
CHTF8-206	ENST00000519534	NUDT16	Q96DE0	195 aa	Known RBP	15.06	■□□□□ 0
CHTF8-206	ENST00000519534	ATAD2	Q6PL18	1390 aa		15.06	■□□□□ 0
CHTF8-206	ENST00000519534	PLEKHG3	A1L390	1219 aa		15.05	■□□□□ -0
CHTF8-206	ENST00000519534	CDC42BPG	Q6DT37	1551 aa		15.05	■□□□□ -0
CHTF8-206	ENST00000519534	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	15.05	■□□□□ -0
CHTF8-206	ENST00000519534	NINL	Q9Y2I6	1382 aa		15.04	■□□□□ -0
CHTF8-206	ENST00000519534	CABP2	Q9NPB3	220 aa		15.03	■□□□□ -0
CHTF8-206	ENST00000519534	MST1R	Q04912	1400 aa		15.02	■□□□□ -0
CHTF8-206	ENST00000519534	ZNF692	Q9BU19	519 aa	Predicted RBP	15.02	■□□□□ -0
CHTF8-206	ENST00000519534	C1orf167	Q5SNV9	1468 aa		15.01	□□□□□ -0.01
CHTF8-206	ENST00000519534	UBAP1L	F5GYI3	381 aa		15.01	□□□□□ -0.01
CHTF8-206	ENST00000519534	TULP4	Q9NRJ4	1543 aa		15.01	□□□□□ -0.01
CHTF8-206	ENST00000519534	DISP3	Q9P2K9	1392 aa		15	□□□□□ -0.01
CHTF8-206	ENST00000519534	PRR36	Q9H6K5	1346 aa		15	□□□□□ -0.01
CHTF8-206	ENST00000519534	C11orf95	C9JLR9	678 aa	Predicted RBP	15	□□□□□ -0.01
CHTF8-206	ENST00000519534	ESCO1	Q5FWF5	840 aa		15	□□□□□ -0.01
CHTF8-206	ENST00000519534	PHF8	Q9UPP1	1060 aa		15	□□□□□ -0.01
CHTF8-206	ENST00000519534	CABP1	Q9NZU7	370 aa		14.99	□□□□□ -0.01
CHTF8-206	ENST00000519534	QRICH2	Q9H0J4	1663 aa		14.99	□□□□□ -0.01
CHTF8-206	ENST00000519534	BRD4	O60885	1362 aa	Predicted RBP	14.98	□□□□□ -0.01
CHTF8-206	ENST00000519534	BRINP3	Q76B58	766 aa		14.98	□□□□□ -0.01
CHTF8-206	ENST00000519534	NALCN	Q8IZF0	1738 aa		14.97	□□□□□ -0.01
CHTF8-206	ENST00000519534	KIF7	Q2M1P5	1343 aa		14.97	□□□□□ -0.01
CHTF8-206	ENST00000519534	XIRP1	Q702N8	1843 aa	Known RBP	14.97	□□□□□ -0.01
CHTF8-206	ENST00000519534	ATP7B	P35670	1465 aa		14.97	□□□□□ -0.01
CHTF8-206	ENST00000519534	ZNF316	A6NFI3	1004 aa	Predicted RBP	14.97	□□□□□ -0.01
CHTF8-206	ENST00000519534	ORAI2	Q96SN7	254 aa		14.97	□□□□□ -0.01
CHTF8-206	ENST00000519534	TERF2IP	Q9NYB0	399 aa		14.97	□□□□□ -0.01
CHTF8-206	ENST00000519534	POLR3A	O14802	1390 aa	Predicted RBP	14.97	□□□□□ -0.01
CHTF8-206	ENST00000519534	WASHC2A	Q641Q2	1341 aa		14.96	□□□□□ -0.01
CHTF8-206	ENST00000519534	NUTM2F	A1L443	756 aa		14.96	□□□□□ -0.01
CHTF8-206	ENST00000519534	CCDC7	Q96M83	1385 aa		14.96	□□□□□ -0.02
CHTF8-206	ENST00000519534	NPHP3	Q7Z494	1330 aa		14.95	□□□□□ -0.02
CHTF8-206	ENST00000519534	PSME1	Q06323	249 aa		14.95	□□□□□ -0.02
CHTF8-206	ENST00000519534	NGDN	Q8NEJ9	315 aa	Known RBP	14.95	□□□□□ -0.02
CHTF8-206	ENST00000519534	SLC12A5	Q9H2X9	1139 aa		14.95	□□□□□ -0.02
CHTF8-206	ENST00000519534	PPIP5K1	Q6PFW1	1433 aa		14.94	□□□□□ -0.02
CHTF8-206	ENST00000519534	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.94	□□□□□ -0.02
CHTF8-206	ENST00000519534	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14.94	□□□□□ -0.02
CHTF8-206	ENST00000519534	TMC1	Q8TDI8	760 aa		14.94	□□□□□ -0.02
CHTF8-206	ENST00000519534	FMN2	Q9NZ56	1722 aa		14.94	□□□□□ -0.02
CHTF8-206	ENST00000519534	ACE	P12821	1306 aa		14.93	□□□□□ -0.02
CHTF8-206	ENST00000519534	CPSF1	Q10570	1443 aa	Known RBP	14.93	□□□□□ -0.02
CHTF8-206	ENST00000519534	FOXO3	O43524	673 aa		14.93	□□□□□ -0.02
CHTF8-206	ENST00000519534	FBXO41	Q8TF61	875 aa		14.93	□□□□□ -0.02
CHTF8-206	ENST00000519534	SOS2	Q07890	1332 aa	Predicted RBP	14.92	□□□□□ -0.02
CHTF8-206	ENST00000519534	PMFBP1	Q8TBY8	1022 aa		14.92	□□□□□ -0.02
CHTF8-206	ENST00000519534	ANKRD36B	Q8N2N9	1353 aa		14.92	□□□□□ -0.02
CHTF8-206	ENST00000519534	PIP4K2B	P78356	416 aa		14.9	□□□□□ -0.02
CHTF8-206	ENST00000519534	KRT28	Q7Z3Y7	464 aa		14.9	□□□□□ -0.02
CHTF8-206	ENST00000519534	LRRC59	Q96AG4	307 aa	Known RBP	14.9	□□□□□ -0.02
CHTF8-206	ENST00000519534	SBNO1	A3KN83	1393 aa		14.89	□□□□□ -0.03
CHTF8-206	ENST00000519534	USP32	Q8NFA0	1604 aa		14.89	□□□□□ -0.03
CHTF8-206	ENST00000519534	PANK3	Q9H999	370 aa		14.88	□□□□□ -0.03
CHTF8-206	ENST00000519534	TTC21A	Q8NDW8	1320 aa		14.88	□□□□□ -0.03
CHTF8-206	ENST00000519534	SSH2	Q76I76	1423 aa		14.87	□□□□□ -0.03
CHTF8-206	ENST00000519534	PER1	O15534	1290 aa	Predicted RBP	14.87	□□□□□ -0.03
CHTF8-206	ENST00000519534	POLR3GL	Q9BT43	218 aa		14.87	□□□□□ -0.03
CHTF8-206	ENST00000519534	CD163L1	Q9NR16	1453 aa		14.87	□□□□□ -0.03
CHTF8-206	ENST00000519534	KTN1	Q86UP2	1357 aa	Known RBP	14.86	□□□□□ -0.03
CHTF8-206	ENST00000519534	USP6	P35125	1406 aa		14.86	□□□□□ -0.03
CHTF8-206	ENST00000519534	KIF1A	Q12756	1690 aa		14.86	□□□□□ -0.03
CHTF8-206	ENST00000519534		A0A1W2PP64	1363 aa		14.85	□□□□□ -0.03
CHTF8-206	ENST00000519534	EDC4	Q6P2E9	1401 aa	Known RBP	14.85	□□□□□ -0.03
CHTF8-206	ENST00000519534	CARD14	Q9BXL6	1004 aa		14.85	□□□□□ -0.03
CHTF8-206	ENST00000519534	SPATA31A3	Q5VYP0	1347 aa		14.85	□□□□□ -0.03
CHTF8-206	ENST00000519534	TTC21B	Q7Z4L5	1316 aa		14.85	□□□□□ -0.03
CHTF8-206	ENST00000519534	KNSTRN	Q9Y448	316 aa		14.84	□□□□□ -0.03
CHTF8-206	ENST00000519534	SCAF1	Q9H7N4	1312 aa	Known RBP	14.84	□□□□□ -0.03
CHTF8-206	ENST00000519534	AHDC1	Q5TGY3	1603 aa	Predicted RBP	14.84	□□□□□ -0.03

Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms