RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 PRAM1Q96QH2 718 aa32.26■■■□□ 2.75
SKP1-206ENST00000519321 ROCK2O75116 1388 aaKnown RBP32.25■■■□□ 2.75
SKP1-206ENST00000519321 PIP4K2BP78356 416 aa32.25■■■□□ 2.75
SKP1-206ENST00000519321 SCAF1Q9H7N4 1312 aaKnown RBP32.25■■■□□ 2.75
SKP1-206ENST00000519321 PLEKHH1Q9ULM0 1364 aa32.24■■■□□ 2.75
SKP1-206ENST00000519321 SLAIN2Q9P270 581 aa32.23■■■□□ 2.75
SKP1-206ENST00000519321 ARHGEF28Q8N1W1 1705 aaKnown RBP32.2■■■□□ 2.74
SKP1-206ENST00000519321 RALGAPBQ86X10 1494 aa32.19■■■□□ 2.74
SKP1-206ENST00000519321 CDC42BPGQ6DT37 1551 aa32.19■■■□□ 2.74
SKP1-206ENST00000519321 GPRASP1Q5JY77 1395 aa32.19■■■□□ 2.74
SKP1-206ENST00000519321 SAFB2Q14151 953 aaKnown RBP eCLIP32.16■■■□□ 2.74
SKP1-206ENST00000519321 MST1RQ04912 1400 aa32.14■■■□□ 2.74
SKP1-206ENST00000519321 CARD11Q9BXL7 1154 aa32.12■■■□□ 2.73
SKP1-206ENST00000519321 EIF3AQ14152 1382 aaKnown RBP32.11■■■□□ 2.73
SKP1-206ENST00000519321 ROBO1Q9Y6N7 1651 aa32.11■■■□□ 2.73
SKP1-206ENST00000519321 ADGRB2O60241 1585 aa32.11■■■□□ 2.73
SKP1-206ENST00000519321 CENPJQ9HC77 1338 aaPredicted RBP32.08■■■□□ 2.73
SKP1-206ENST00000519321 MINK1Q8N4C8 1332 aaPredicted RBP32.06■■■□□ 2.72
SKP1-206ENST00000519321 C1orf167Q5SNV9 1468 aa32.06■■■□□ 2.72
SKP1-206ENST00000519321 FMN2Q9NZ56 1722 aa32.05■■■□□ 2.72
SKP1-206ENST00000519321 BRINP3Q76B58 766 aa32.02■■■□□ 2.72
SKP1-206ENST00000519321 HIRIP3Q9BW71 556 aaPredicted RBP32.02■■■□□ 2.72
SKP1-206ENST00000519321 WASLO00401 505 aaPredicted RBP32.01■■■□□ 2.71
SKP1-206ENST00000519321 HSPA1LP34931 641 aa32■■■□□ 2.71
SKP1-206ENST00000519321 QRICH2Q9H0J4 1663 aa31.99■■■□□ 2.71
SKP1-206ENST00000519321 ANKARQ7Z5J8 1434 aa31.98■■■□□ 2.71
SKP1-206ENST00000519321 NUTM2FA1L443 756 aa31.96■■■□□ 2.71
SKP1-206ENST00000519321 ESCO1Q5FWF5 840 aa31.96■■■□□ 2.71
SKP1-206ENST00000519321 AHDC1Q5TGY3 1603 aaPredicted RBP31.94■■■□□ 2.7
SKP1-206ENST00000519321 ORAI2Q96SN7 254 aa31.94■■■□□ 2.7
SKP1-206ENST00000519321 TULP4Q9NRJ4 1543 aa31.94■■■□□ 2.7
SKP1-206ENST00000519321 CDK19Q9BWU1 502 aa31.91■■■□□ 2.7
SKP1-206ENST00000519321 PHLPP1O60346 1717 aa31.91■■■□□ 2.7
SKP1-206ENST00000519321 SBNO2Q9Y2G9 1366 aa31.91■■■□□ 2.7
SKP1-206ENST00000519321 NHSL1Q5SYE7 1610 aa31.89■■■□□ 2.7
SKP1-206ENST00000519321 KIF1AQ12756 1690 aa31.89■■■□□ 2.7
SKP1-206ENST00000519321 EVC2Q86UK5 1308 aa31.88■■■□□ 2.69
SKP1-206ENST00000519321 USP32Q8NFA0 1604 aa31.87■■■□□ 2.69
SKP1-206ENST00000519321 SLC24A1O60721 1099 aa31.87■■■□□ 2.69
SKP1-206ENST00000519321 USP47Q96K76 1375 aa31.86■■■□□ 2.69
SKP1-206ENST00000519321 RGPD8O14715 1765 aaPredicted RBP31.86■■■□□ 2.69
SKP1-206ENST00000519321 NPHP3Q7Z494 1330 aa31.85■■■□□ 2.69
SKP1-206ENST00000519321 SRPK2P78362 688 aaKnown RBP31.85■■■□□ 2.69
SKP1-206ENST00000519321 PHF8Q9UPP1 1060 aa31.85■■■□□ 2.69
SKP1-206ENST00000519321 NUDT16Q96DE0 195 aaKnown RBP31.84■■■□□ 2.69
SKP1-206ENST00000519321 COL16A1Q07092 1604 aaPredicted RBP31.83■■■□□ 2.69
SKP1-206ENST00000519321 PRR36Q9H6K5 1346 aa31.83■■■□□ 2.69
SKP1-206ENST00000519321 ATP7BP35670 1465 aa31.83■■■□□ 2.69
SKP1-206ENST00000519321 ITSN1Q15811 1721 aa31.83■■■□□ 2.69
SKP1-206ENST00000519321 ST20-MTHFSA0A0A6YYL1 179 aa31.82■■■□□ 2.68
SKP1-206ENST00000519321 CCDC61Q9Y6R9 512 aa31.8■■■□□ 2.68
SKP1-206ENST00000519321 FOXO3O43524 673 aa31.79■■■□□ 2.68
SKP1-206ENST00000519321 SOS2Q07890 1332 aaPredicted RBP31.78■■■□□ 2.68
SKP1-206ENST00000519321 LRRC59Q96AG4 307 aaKnown RBP31.78■■■□□ 2.68
SKP1-206ENST00000519321 CABP2Q9NPB3 220 aa31.78■■■□□ 2.68
SKP1-206ENST00000519321 DDX17Q92841 729 aaKnown RBP31.77■■■□□ 2.68
SKP1-206ENST00000519321 JCADQ9P266 1359 aa31.76■■■□□ 2.67
SKP1-206ENST00000519321 PMFBP1Q8TBY8 1022 aa31.75■■■□□ 2.67
SKP1-206ENST00000519321 TOPAZ1Q8N9V7 1692 aa31.74■■■□□ 2.67
SKP1-206ENST00000519321 TESK2Q96S53 571 aa31.74■■■□□ 2.67
SKP1-206ENST00000519321 PSME1Q06323 249 aa31.73■■■□□ 2.67
SKP1-206ENST00000519321 PXDNQ92626 1479 aa31.72■■■□□ 2.67
SKP1-206ENST00000519321 ATAD2Q6PL18 1390 aa31.72■■■□□ 2.67
SKP1-206ENST00000519321 EIF4G2P78344 907 aaKnown RBP eCLIP31.72■■■□□ 2.67
SKP1-206ENST00000519321 NGDNQ8NEJ9 315 aaKnown RBP31.72■■■□□ 2.67
SKP1-206ENST00000519321 PLEKHG3A1L390 1219 aa31.71■■■□□ 2.67
SKP1-206ENST00000519321 PUS7Q96PZ0 661 aaKnown RBP31.71■■■□□ 2.67
SKP1-206ENST00000519321 KRT28Q7Z3Y7 464 aa31.7■■■□□ 2.67
SKP1-206ENST00000519321 PPIP5K1Q6PFW1 1433 aa31.69■■■□□ 2.66
SKP1-206ENST00000519321 TMF1P82094 1093 aa31.68■■■□□ 2.66
SKP1-206ENST00000519321 SHPRHQ149N8 1683 aa31.67■■■□□ 2.66
SKP1-206ENST00000519321 XPCQ01831 940 aaPredicted RBP31.66■■■□□ 2.66
SKP1-206ENST00000519321 POLR3AO14802 1390 aaPredicted RBP31.66■■■□□ 2.66
SKP1-206ENST00000519321 CDCA8Q53HL2 280 aa31.64■■■□□ 2.66
SKP1-206ENST00000519321 ACEP12821 1306 aa31.64■■■□□ 2.66
SKP1-206ENST00000519321 SPATA31A6Q5VVP1 1343 aa31.64■■■□□ 2.66
SKP1-206ENST00000519321 CABP1Q9NZU7 370 aa31.63■■■□□ 2.65
SKP1-206ENST00000519321 SBNO1A3KN83 1393 aa31.63■■■□□ 2.65
SKP1-206ENST00000519321 PNPLA6Q8IY17 1366 aa31.61■■■□□ 2.65
SKP1-206ENST00000519321 HSPA5P11021 654 aaKnown RBP31.61■■■□□ 2.65
SKP1-206ENST00000519321 SPATA31A3Q5VYP0 1347 aa31.6■■■□□ 2.65
SKP1-206ENST00000519321 TNS3Q68CZ2 1445 aa31.58■■■□□ 2.65
SKP1-206ENST00000519321 DISP3Q9P2K9 1392 aa31.57■■■□□ 2.64
SKP1-206ENST00000519321 BRD4O60885 1362 aaPredicted RBP31.56■■■□□ 2.64
SKP1-206ENST00000519321 ZNF692Q9BU19 519 aaPredicted RBP31.56■■■□□ 2.64
SKP1-206ENST00000519321 ARHGEF10O15013 1369 aa31.56■■■□□ 2.64
SKP1-206ENST00000519321 NINLQ9Y2I6 1382 aa31.56■■■□□ 2.64
SKP1-206ENST00000519321 TRPM3Q9HCF6 1732 aaPredicted RBP31.55■■■□□ 2.64
SKP1-206ENST00000519321 COL22A1Q8NFW1 1626 aaPredicted RBP31.54■■■□□ 2.64
SKP1-206ENST00000519321 TMC1Q8TDI8 760 aa31.53■■■□□ 2.64
SKP1-206ENST00000519321 MED1Q15648 1581 aaPredicted RBP31.51■■■□□ 2.64
SKP1-206ENST00000519321 PAK3O75914 559 aaPredicted RBP31.51■■■□□ 2.63
SKP1-206ENST00000519321 LMOD2Q6P5Q4 547 aa31.51■■■□□ 2.63
SKP1-206ENST00000519321 USP6P35125 1406 aa31.49■■■□□ 2.63
SKP1-206ENST00000519321 ZEB1P37275 1124 aaPredicted RBP31.49■■■□□ 2.63
SKP1-206ENST00000519321 CPSF1Q10570 1443 aaKnown RBP31.49■■■□□ 2.63
SKP1-206ENST00000519321 HDGFL2Q7Z4V5 671 aaPredicted RBP31.48■■■□□ 2.63
SKP1-206ENST00000519321 TERF2IPQ9NYB0 399 aa31.48■■■□□ 2.63
SKP1-206ENST00000519321 AKAP12Q02952 1782 aa31.48■■■□□ 2.63
SKP1-206ENST00000519321 ALS2Q96Q42 1657 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms