RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 RRP7AQ9Y3A4 280 aaKnown RBP21.4■■□□□ 1.02
PCDHGA11-202ENST00000518882 PPLO60437 1756 aa21.4■■□□□ 1.02
PCDHGA11-202ENST00000518882 IQSEC2Q5JU85 1478 aa21.39■■□□□ 1.02
PCDHGA11-202ENST00000518882 SLC12A5Q9H2X9 1139 aa21.39■■□□□ 1.02
PCDHGA11-202ENST00000518882 TRAK1Q9UPV9 953 aa21.39■■□□□ 1.02
PCDHGA11-202ENST00000518882 MORC1Q86VD1 984 aa21.39■■□□□ 1.01
PCDHGA11-202ENST00000518882 NINLQ9Y2I6 1382 aa21.38■■□□□ 1.01
PCDHGA11-202ENST00000518882 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
PCDHGA11-202ENST00000518882 LMTK2Q8IWU2 1503 aa21.38■■□□□ 1.01
PCDHGA11-202ENST00000518882 SEC24BO95487 1268 aa21.36■■□□□ 1.01
PCDHGA11-202ENST00000518882 CHGAP10645 457 aaKnown RBP21.36■■□□□ 1.01
PCDHGA11-202ENST00000518882 FRAT1Q92837 279 aaPredicted RBP21.36■■□□□ 1.01
PCDHGA11-202ENST00000518882 ADGRB1O14514 1584 aa21.36■■□□□ 1.01
PCDHGA11-202ENST00000518882 RTN4Q9NQC3 1192 aaKnown RBP21.36■■□□□ 1.01
PCDHGA11-202ENST00000518882 TCP11L2Q8N4U5 519 aa21.35■■□□□ 1.01
PCDHGA11-202ENST00000518882 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
PCDHGA11-202ENST00000518882 RARSP54136 660 aaKnown RBP21.35■■□□□ 1.01
PCDHGA11-202ENST00000518882 TNNQ9UQP3 1299 aa21.35■■□□□ 1.01
PCDHGA11-202ENST00000518882 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
PCDHGA11-202ENST00000518882 FRAT2O75474 233 aaPredicted RBP21.34■■□□□ 1.01
PCDHGA11-202ENST00000518882 TMEM132EQ6IEE7 984 aa21.34■■□□□ 1.01
PCDHGA11-202ENST00000518882 USP32Q8NFA0 1604 aa21.33■■□□□ 1.01
PCDHGA11-202ENST00000518882 RLBP1P12271 317 aa21.32■■□□□ 1
PCDHGA11-202ENST00000518882 NPATQ14207 1427 aa21.32■■□□□ 1
PCDHGA11-202ENST00000518882 C14orf93Q9H972 538 aaKnown RBP21.32■■□□□ 1
PCDHGA11-202ENST00000518882 MAPK8IP3Q9UPT6 1336 aa21.32■■□□□ 1
PCDHGA11-202ENST00000518882 ZNF518AQ6AHZ1 1483 aa21.32■■□□□ 1
PCDHGA11-202ENST00000518882 NLRP1Q9C000 1473 aa21.31■■□□□ 1
PCDHGA11-202ENST00000518882 MTHFSP49914 203 aa21.31■■□□□ 1
PCDHGA11-202ENST00000518882 BCL2L13Q9BXK5 485 aa21.3■■□□□ 1
PCDHGA11-202ENST00000518882 PCDHB15Q9Y5E8 787 aa21.3■■□□□ 1
PCDHGA11-202ENST00000518882 ASXL2Q76L83 1435 aa21.3■■□□□ 1
PCDHGA11-202ENST00000518882 BRPF3Q9ULD4 1205 aa21.3■■□□□ 1
PCDHGA11-202ENST00000518882 WDR63Q8IWG1 891 aa21.28■■□□□ 1
PCDHGA11-202ENST00000518882 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
PCDHGA11-202ENST00000518882 GLI2P10070 1586 aa21.26■□□□□ 0.99
PCDHGA11-202ENST00000518882 ARHGEF28Q8N1W1 1705 aaKnown RBP21.25■□□□□ 0.99
PCDHGA11-202ENST00000518882 PMFBP1Q8TBY8 1022 aa21.25■□□□□ 0.99
PCDHGA11-202ENST00000518882 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
PCDHGA11-202ENST00000518882 CCDC27Q2M243 656 aa21.24■□□□□ 0.99
PCDHGA11-202ENST00000518882 GGT6Q6P531 493 aa21.24■□□□□ 0.99
PCDHGA11-202ENST00000518882 SIGLEC1Q9BZZ2 1709 aa21.23■□□□□ 0.99
PCDHGA11-202ENST00000518882 HECW2Q9P2P5 1572 aa21.23■□□□□ 0.99
PCDHGA11-202ENST00000518882 ADGRB2O60241 1585 aa21.22■□□□□ 0.99
PCDHGA11-202ENST00000518882 CFAP53Q96M91 514 aa21.22■□□□□ 0.99
PCDHGA11-202ENST00000518882 PDZRN3Q9UPQ7 1066 aa21.22■□□□□ 0.99
PCDHGA11-202ENST00000518882 NUTM2DQ5VT03 806 aaPredicted RBP21.21■□□□□ 0.99
PCDHGA11-202ENST00000518882 AAMPQ13685 434 aa21.21■□□□□ 0.99
PCDHGA11-202ENST00000518882 ANKRD36BQ8N2N9 1353 aa21.2■□□□□ 0.98
PCDHGA11-202ENST00000518882 CAMSAP1Q5T5Y3 1602 aa21.2■□□□□ 0.98
PCDHGA11-202ENST00000518882 ABCC3O15438 1527 aa21.19■□□□□ 0.98
PCDHGA11-202ENST00000518882 U2AF1L5P0DN76 240 aaPredicted RBP21.19■□□□□ 0.98
PCDHGA11-202ENST00000518882 U2AF1Q01081 240 aaKnown RBP eCLIP21.19■□□□□ 0.98
PCDHGA11-202ENST00000518882 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
PCDHGA11-202ENST00000518882 ANO8Q9HCE9 1232 aaPredicted RBP21.18■□□□□ 0.98
PCDHGA11-202ENST00000518882 RPGRIP1LQ68CZ1 1315 aa21.18■□□□□ 0.98
PCDHGA11-202ENST00000518882 EVC2Q86UK5 1308 aa21.18■□□□□ 0.98
PCDHGA11-202ENST00000518882 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
PCDHGA11-202ENST00000518882 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
PCDHGA11-202ENST00000518882 NEXMIFQ5QGS0 1516 aa21.17■□□□□ 0.98
PCDHGA11-202ENST00000518882 MVPQ14764 893 aaKnown RBP21.16■□□□□ 0.98
PCDHGA11-202ENST00000518882 SLKQ9H2G2 1235 aaPredicted RBP21.16■□□□□ 0.98
PCDHGA11-202ENST00000518882 ZMYM3Q14202 1370 aa21.16■□□□□ 0.98
PCDHGA11-202ENST00000518882 PIK3C2BO00750 1634 aa21.16■□□□□ 0.98
PCDHGA11-202ENST00000518882 BECN1Q14457 450 aa21.16■□□□□ 0.98
PCDHGA11-202ENST00000518882 TSR2Q969E8 191 aaKnown RBP21.16■□□□□ 0.98
PCDHGA11-202ENST00000518882 NSD2O96028 1365 aa21.16■□□□□ 0.98
PCDHGA11-202ENST00000518882 MLH3Q9UHC1 1453 aa21.16■□□□□ 0.98
PCDHGA11-202ENST00000518882 TBC1D32Q96NH3 1257 aa21.15■□□□□ 0.98
PCDHGA11-202ENST00000518882 RWDD1Q9H446 243 aaPredicted RBP21.15■□□□□ 0.98
PCDHGA11-202ENST00000518882 PUS7Q96PZ0 661 aaKnown RBP21.14■□□□□ 0.97
PCDHGA11-202ENST00000518882 CD109Q6YHK3 1445 aa21.14■□□□□ 0.97
PCDHGA11-202ENST00000518882 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
PCDHGA11-202ENST00000518882 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
PCDHGA11-202ENST00000518882 ANTXR1Q9H6X2 564 aa21.13■□□□□ 0.97
PCDHGA11-202ENST00000518882 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
PCDHGA11-202ENST00000518882 CFAP74Q9C0B2 1584 aa21.12■□□□□ 0.97
PCDHGA11-202ENST00000518882 A0A1W2PP64 1363 aa21.11■□□□□ 0.97
PCDHGA11-202ENST00000518882 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
PCDHGA11-202ENST00000518882 PLEKHF1Q96S99 279 aa21.11■□□□□ 0.97
PCDHGA11-202ENST00000518882 POGKQ9P215 609 aa21.11■□□□□ 0.97
PCDHGA11-202ENST00000518882 FTSJ3Q8IY81 847 aaKnown RBP21.11■□□□□ 0.97
PCDHGA11-202ENST00000518882 UPF2Q9HAU5 1272 aaKnown RBP21.11■□□□□ 0.97
PCDHGA11-202ENST00000518882 TBC1D2Q9BYX2 928 aa21.1■□□□□ 0.97
PCDHGA11-202ENST00000518882 COL3A1P02461 1466 aaPredicted RBP21.1■□□□□ 0.97
PCDHGA11-202ENST00000518882 EXOSC9Q06265 439 aaKnown RBP21.09■□□□□ 0.97
PCDHGA11-202ENST00000518882 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
PCDHGA11-202ENST00000518882 ABCC11Q96J66 1382 aa21.09■□□□□ 0.97
PCDHGA11-202ENST00000518882 VGFO15240 615 aaPredicted RBP21.09■□□□□ 0.97
PCDHGA11-202ENST00000518882 TRIM35Q9UPQ4 493 aa21.09■□□□□ 0.97
PCDHGA11-202ENST00000518882 MYO5BQ9ULV0 1848 aa21.09■□□□□ 0.97
PCDHGA11-202ENST00000518882 U2SURPO15042 1029 aaKnown RBP21.08■□□□□ 0.97
PCDHGA11-202ENST00000518882 GGNBP2Q9H3C7 697 aa21.08■□□□□ 0.97
PCDHGA11-202ENST00000518882 TRIM27P14373 513 aa21.08■□□□□ 0.96
PCDHGA11-202ENST00000518882 TMPOP42166 694 aaKnown RBP21.08■□□□□ 0.96
PCDHGA11-202ENST00000518882 SMC4Q9NTJ3 1288 aa21.08■□□□□ 0.96
PCDHGA11-202ENST00000518882 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
PCDHGA11-202ENST00000518882 SSH1Q8WYL5 1049 aa21.06■□□□□ 0.96
PCDHGA11-202ENST00000518882 CT47B1P0C2W7 299 aaPredicted RBP21.06■□□□□ 0.96
PCDHGA11-202ENST00000518882 STK26Q9P289 416 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms