RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 ADAMTS13Q76LX8 1427 aa31.73■■■□□ 2.67
SLIT3-204ENST00000518140 EID1Q9Y6B2 187 aa31.73■■■□□ 2.67
SLIT3-204ENST00000518140 HNRNPUQ00839 825 aaKnown RBP eCLIP31.72■■■□□ 2.67
SLIT3-204ENST00000518140 PLEKHG1Q9ULL1 1385 aa31.72■■■□□ 2.67
SLIT3-204ENST00000518140 ARHGAP23Q9P227 1491 aa31.71■■■□□ 2.67
SLIT3-204ENST00000518140 SLIT1O75093 1534 aa31.71■■■□□ 2.67
SLIT3-204ENST00000518140 PUS7Q96PZ0 661 aaKnown RBP31.71■■■□□ 2.67
SLIT3-204ENST00000518140 SLC26A8Q96RN1 970 aa31.7■■■□□ 2.67
SLIT3-204ENST00000518140 PNISRQ8TF01 805 aaKnown RBP31.69■■■□□ 2.66
SLIT3-204ENST00000518140 SRPK2P78362 688 aaKnown RBP31.69■■■□□ 2.66
SLIT3-204ENST00000518140 DLC1Q96QB1 1528 aa31.69■■■□□ 2.66
SLIT3-204ENST00000518140 BRD4O60885 1362 aaPredicted RBP31.68■■■□□ 2.66
SLIT3-204ENST00000518140 NLRP13Q86W25 1043 aa31.68■■■□□ 2.66
SLIT3-204ENST00000518140 CDK19Q9BWU1 502 aa31.65■■■□□ 2.66
SLIT3-204ENST00000518140 CEP170BQ9Y4F5 1589 aaPredicted RBP31.63■■■□□ 2.65
SLIT3-204ENST00000518140 MED14O60244 1454 aa31.62■■■□□ 2.65
SLIT3-204ENST00000518140 NPC1L1Q9UHC9 1359 aa31.61■■■□□ 2.65
SLIT3-204ENST00000518140 NSD3Q9BZ95 1437 aa31.59■■■□□ 2.65
SLIT3-204ENST00000518140 TECPR2O15040 1411 aa31.58■■■□□ 2.65
SLIT3-204ENST00000518140 PPP2R1AP30153 589 aa31.58■■■□□ 2.65
SLIT3-204ENST00000518140 SIRT1Q96EB6 747 aa31.58■■■□□ 2.65
SLIT3-204ENST00000518140 ROBO2Q9HCK4 1378 aa31.58■■■□□ 2.65
SLIT3-204ENST00000518140 PTPRUQ92729 1446 aa31.56■■■□□ 2.64
SLIT3-204ENST00000518140 TBX22Q9Y458 520 aa31.55■■■□□ 2.64
SLIT3-204ENST00000518140 FAM135BQ49AJ0 1406 aa31.55■■■□□ 2.64
SLIT3-204ENST00000518140 ANKRD36BQ8N2N9 1353 aa31.54■■■□□ 2.64
SLIT3-204ENST00000518140 ATAD2Q6PL18 1390 aa31.53■■■□□ 2.64
SLIT3-204ENST00000518140 KNDC1Q76NI1 1749 aa31.51■■■□□ 2.64
SLIT3-204ENST00000518140 CPS1P31327 1500 aa31.51■■■□□ 2.64
SLIT3-204ENST00000518140 SENP3-EIF4A1A0A087X0R7 540 aa31.51■■■□□ 2.63
SLIT3-204ENST00000518140 WASLO00401 505 aaPredicted RBP31.5■■■□□ 2.63
SLIT3-204ENST00000518140 CABP1Q9NZU7 370 aa31.5■■■□□ 2.63
SLIT3-204ENST00000518140 AMOTL2Q9Y2J4 779 aa31.5■■■□□ 2.63
SLIT3-204ENST00000518140 A0A1W2PP64 1363 aa31.49■■■□□ 2.63
SLIT3-204ENST00000518140 SETD1BQ9UPS6 1966 aaKnown RBP31.49■■■□□ 2.63
SLIT3-204ENST00000518140 NINLQ9Y2I6 1382 aa31.47■■■□□ 2.63
SLIT3-204ENST00000518140 CD163L1Q9NR16 1453 aa31.46■■■□□ 2.63
SLIT3-204ENST00000518140 ANKLE2Q86XL3 938 aa31.46■■■□□ 2.63
SLIT3-204ENST00000518140 ZNF142P52746 1687 aaPredicted RBP31.44■■■□□ 2.62
SLIT3-204ENST00000518140 CGNL1Q0VF96 1302 aa31.43■■■□□ 2.62
SLIT3-204ENST00000518140 NCKAP5LQ9HCH0 1330 aa31.43■■■□□ 2.62
SLIT3-204ENST00000518140 TERF2IPQ9NYB0 399 aa31.42■■■□□ 2.62
SLIT3-204ENST00000518140 MORC1Q86VD1 984 aa31.42■■■□□ 2.62
SLIT3-204ENST00000518140 ZBED9Q6R2W3 1325 aa31.41■■■□□ 2.62
SLIT3-204ENST00000518140 TNNT2P45379 298 aaPredicted RBP31.41■■■□□ 2.62
SLIT3-204ENST00000518140 NUDT16Q96DE0 195 aaKnown RBP31.39■■■□□ 2.62
SLIT3-204ENST00000518140 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.39■■■□□ 2.62
SLIT3-204ENST00000518140 DIP2AQ14689 1571 aa31.37■■■□□ 2.61
SLIT3-204ENST00000518140 USP32Q8NFA0 1604 aa31.37■■■□□ 2.61
SLIT3-204ENST00000518140 HDGFL2Q7Z4V5 671 aaPredicted RBP31.36■■■□□ 2.61
SLIT3-204ENST00000518140 PRR36Q9H6K5 1346 aa31.36■■■□□ 2.61
SLIT3-204ENST00000518140 KCNA6P17658 529 aa31.35■■■□□ 2.61
SLIT3-204ENST00000518140 GGNBP2Q9H3C7 697 aa31.33■■■□□ 2.61
SLIT3-204ENST00000518140 ADAMTS8Q9UP79 889 aa31.33■■■□□ 2.61
SLIT3-204ENST00000518140 PPIP5K1Q6PFW1 1433 aa31.33■■■□□ 2.61
SLIT3-204ENST00000518140 FYB1O15117 783 aa31.33■■■□□ 2.61
SLIT3-204ENST00000518140 NUTM2FA1L443 756 aa31.32■■■□□ 2.6
SLIT3-204ENST00000518140 CCDC61Q9Y6R9 512 aa31.32■■■□□ 2.6
SLIT3-204ENST00000518140 PTCH1Q13635 1447 aa31.31■■■□□ 2.6
SLIT3-204ENST00000518140 NSD2O96028 1365 aa31.28■■■□□ 2.6
SLIT3-204ENST00000518140 ATP7BP35670 1465 aa31.27■■■□□ 2.6
SLIT3-204ENST00000518140 XRN1Q8IZH2 1706 aaKnown RBP31.27■■■□□ 2.6
SLIT3-204ENST00000518140 PIK3R4Q99570 1358 aa31.27■■■□□ 2.6
SLIT3-204ENST00000518140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.26■■■□□ 2.6
SLIT3-204ENST00000518140 ADGRB2O60241 1585 aa31.26■■■□□ 2.6
SLIT3-204ENST00000518140 CPSF1Q10570 1443 aaKnown RBP31.26■■■□□ 2.59
SLIT3-204ENST00000518140 WDR43Q15061 677 aaKnown RBP eCLIP31.25■■■□□ 2.59
SLIT3-204ENST00000518140 SALL2Q9Y467 1007 aaPredicted RBP31.25■■■□□ 2.59
SLIT3-204ENST00000518140 MTHFSP49914 203 aa31.23■■■□□ 2.59
SLIT3-204ENST00000518140 NPHP4O75161 1426 aaPredicted RBP31.23■■■□□ 2.59
SLIT3-204ENST00000518140 BLMP54132 1417 aaPredicted RBP31.22■■■□□ 2.59
SLIT3-204ENST00000518140 SUPT16HQ9Y5B9 1047 aaKnown RBP31.22■■■□□ 2.59
SLIT3-204ENST00000518140 RBM33Q96EV2 1170 aaKnown RBP31.21■■■□□ 2.59
SLIT3-204ENST00000518140 POLR3AO14802 1390 aaPredicted RBP31.2■■■□□ 2.59
SLIT3-204ENST00000518140 INSRP06213 1382 aa31.19■■■□□ 2.58
SLIT3-204ENST00000518140 KDM4FA0A1W2PPD8 638 aa31.19■■■□□ 2.58
SLIT3-204ENST00000518140 CDC42BPGQ6DT37 1551 aa31.17■■■□□ 2.58
SLIT3-204ENST00000518140 CHD2O14647 1828 aaKnown RBP31.16■■■□□ 2.58
SLIT3-204ENST00000518140 ZRANB1Q9UGI0 708 aa31.15■■■□□ 2.58
SLIT3-204ENST00000518140 PLEKHG3A1L390 1219 aa31.15■■■□□ 2.58
SLIT3-204ENST00000518140 NME9Q86XW9 330 aa31.15■■■□□ 2.58
SLIT3-204ENST00000518140 EDC4Q6P2E9 1401 aaKnown RBP31.14■■■□□ 2.58
SLIT3-204ENST00000518140 ACEP12821 1306 aa31.14■■■□□ 2.57
SLIT3-204ENST00000518140 FBLN1P23142 703 aa31.13■■■□□ 2.57
SLIT3-204ENST00000518140 CCDC146Q8IYE0 955 aa31.12■■■□□ 2.57
SLIT3-204ENST00000518140 ZNF692Q9BU19 519 aaPredicted RBP31.12■■■□□ 2.57
SLIT3-204ENST00000518140 PMFBP1Q8TBY8 1022 aa31.1■■■□□ 2.57
SLIT3-204ENST00000518140 NKTRP30414 1462 aaKnown RBP31.1■■■□□ 2.57
SLIT3-204ENST00000518140 HSPA2P54652 639 aa31.09■■■□□ 2.57
SLIT3-204ENST00000518140 TOPAZ1Q8N9V7 1692 aa31.09■■■□□ 2.57
SLIT3-204ENST00000518140 KIF20BQ96Q89 1820 aa31.09■■■□□ 2.57
SLIT3-204ENST00000518140 ANKRD26Q9UPS8 1709 aa31.08■■■□□ 2.57
SLIT3-204ENST00000518140 MYT1Q01538 1121 aa31.07■■■□□ 2.56
SLIT3-204ENST00000518140 SMG6Q86US8 1419 aaKnown RBP31.07■■■□□ 2.56
SLIT3-204ENST00000518140 AKAP12Q02952 1782 aa31.06■■■□□ 2.56
SLIT3-204ENST00000518140 CFAP53Q96M91 514 aa31.06■■■□□ 2.56
SLIT3-204ENST00000518140 MON2Q7Z3U7 1717 aa31.06■■■□□ 2.56
SLIT3-204ENST00000518140 NUDCQ9Y266 331 aa31.05■■■□□ 2.56
SLIT3-204ENST00000518140 SHPRHQ149N8 1683 aa31.04■■■□□ 2.56
SLIT3-204ENST00000518140 FKBP8Q14318 412 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms