RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 CROCC2H7BZ55 1655 aa11.2□□□□□ -0.62
PVT1-206ENST00000517838 SETD5Q9C0A6 1442 aa11.2□□□□□ -0.62
PVT1-206ENST00000517838 ANKRD50Q9ULJ7 1429 aa11.2□□□□□ -0.62
PVT1-206ENST00000517838 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
PVT1-206ENST00000517838 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
PVT1-206ENST00000517838 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
PVT1-206ENST00000517838 C8orf37Q96NL8 207 aa11.2□□□□□ -0.62
PVT1-206ENST00000517838 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
PVT1-206ENST00000517838 DIP2AQ14689 1571 aa11.2□□□□□ -0.62
PVT1-206ENST00000517838 CHD2O14647 1828 aaKnown RBP11.19□□□□□ -0.62
PVT1-206ENST00000517838 TMEM131LA2VDJ0 1609 aa11.19□□□□□ -0.62
PVT1-206ENST00000517838 ADGRL2O95490 1459 aa11.19□□□□□ -0.62
PVT1-206ENST00000517838 RGS12O14924 1447 aa11.18□□□□□ -0.62
PVT1-206ENST00000517838 FAM50AQ14320 339 aaKnown RBP11.18□□□□□ -0.62
PVT1-206ENST00000517838 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.18□□□□□ -0.62
PVT1-206ENST00000517838 SHPRHQ149N8 1683 aa11.17□□□□□ -0.62
PVT1-206ENST00000517838 DCCP43146 1447 aa11.17□□□□□ -0.62
PVT1-206ENST00000517838 MST1RQ04912 1400 aa11.17□□□□□ -0.62
PVT1-206ENST00000517838 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
PVT1-206ENST00000517838 ASXL1Q8IXJ9 1541 aa11.16□□□□□ -0.62
PVT1-206ENST00000517838 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
PVT1-206ENST00000517838 NGLY1Q96IV0 654 aa11.15□□□□□ -0.62
PVT1-206ENST00000517838 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
PVT1-206ENST00000517838 METP08581 1390 aa11.15□□□□□ -0.63
PVT1-206ENST00000517838 TRPM2O94759 1503 aa11.13□□□□□ -0.63
PVT1-206ENST00000517838 GCC2Q8IWJ2 1684 aa11.12□□□□□ -0.63
PVT1-206ENST00000517838 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
PVT1-206ENST00000517838 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
PVT1-206ENST00000517838 ATAD2Q6PL18 1390 aa11.12□□□□□ -0.63
PVT1-206ENST00000517838 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
PVT1-206ENST00000517838 USP21Q9UK80 565 aa11.11□□□□□ -0.63
PVT1-206ENST00000517838 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
PVT1-206ENST00000517838 ORAI2Q96SN7 254 aa11.1□□□□□ -0.63
PVT1-206ENST00000517838 TRPC5Q9UL62 973 aaPredicted RBP11.1□□□□□ -0.63
PVT1-206ENST00000517838 NUP155O75694 1391 aa11.1□□□□□ -0.63
PVT1-206ENST00000517838 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
PVT1-206ENST00000517838 ADGRL3Q9HAR2 1447 aa11.09□□□□□ -0.63
PVT1-206ENST00000517838 MYO5BQ9ULV0 1848 aa11.09□□□□□ -0.63
PVT1-206ENST00000517838 UNC13BO14795 1591 aa11.09□□□□□ -0.63
PVT1-206ENST00000517838 ZNF326Q5BKZ1 582 aaKnown RBP11.09□□□□□ -0.63
PVT1-206ENST00000517838 C1orf167Q5SNV9 1468 aa11.08□□□□□ -0.64
PVT1-206ENST00000517838 SETBP1Q9Y6X0 1596 aa11.07□□□□□ -0.64
PVT1-206ENST00000517838 ROCK1Q13464 1354 aa11.07□□□□□ -0.64
PVT1-206ENST00000517838 NHSL1Q5SYE7 1610 aa11.07□□□□□ -0.64
PVT1-206ENST00000517838 E9PCH4 1651 aa11.07□□□□□ -0.64
PVT1-206ENST00000517838 XRN1Q8IZH2 1706 aaKnown RBP11.06□□□□□ -0.64
PVT1-206ENST00000517838 NRXN3Q9Y4C0 1643 aa11.06□□□□□ -0.64
PVT1-206ENST00000517838 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
PVT1-206ENST00000517838 ATRNO75882 1429 aa11.05□□□□□ -0.64
PVT1-206ENST00000517838 ZEB1P37275 1124 aaPredicted RBP11.05□□□□□ -0.64
PVT1-206ENST00000517838 MIER1Q8N108 512 aa11.05□□□□□ -0.64
PVT1-206ENST00000517838 ROBO2Q9HCK4 1378 aa11.04□□□□□ -0.64
PVT1-206ENST00000517838 EP400Q96L91 3159 aa11.04□□□□□ -0.64
PVT1-206ENST00000517838 PTCH1Q13635 1447 aa11.04□□□□□ -0.64
PVT1-206ENST00000517838 BCL9LQ86UU0 1499 aa11.04□□□□□ -0.64
PVT1-206ENST00000517838 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
PVT1-206ENST00000517838 GJD4Q96KN9 370 aaPredicted RBP11.03□□□□□ -0.64
PVT1-206ENST00000517838 IQGAP3Q86VI3 1631 aa11.02□□□□□ -0.64
PVT1-206ENST00000517838 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
PVT1-206ENST00000517838 HAX1O00165 279 aa11.02□□□□□ -0.65
PVT1-206ENST00000517838 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
PVT1-206ENST00000517838 ITGAEP38570 1179 aa11.01□□□□□ -0.65
PVT1-206ENST00000517838 MYOM2P54296 1465 aa11□□□□□ -0.65
PVT1-206ENST00000517838 FOXO3O43524 673 aa11□□□□□ -0.65
PVT1-206ENST00000517838 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
PVT1-206ENST00000517838 ESCO1Q5FWF5 840 aa11□□□□□ -0.65
PVT1-206ENST00000517838 LAMC1P11047 1609 aa10.99□□□□□ -0.65
PVT1-206ENST00000517838 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
PVT1-206ENST00000517838 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
PVT1-206ENST00000517838 DEFB132Q7Z7B7 95 aa10.99□□□□□ -0.65
PVT1-206ENST00000517838 NPHP3Q7Z494 1330 aa10.99□□□□□ -0.65
PVT1-206ENST00000517838 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
PVT1-206ENST00000517838 NALCNQ8IZF0 1738 aa10.98□□□□□ -0.65
PVT1-206ENST00000517838 EVX2Q03828 476 aa10.97□□□□□ -0.65
PVT1-206ENST00000517838 UNC5CLQ8IV45 518 aa10.97□□□□□ -0.65
PVT1-206ENST00000517838 BLMP54132 1417 aaPredicted RBP10.97□□□□□ -0.65
PVT1-206ENST00000517838 PXDNQ92626 1479 aa10.96□□□□□ -0.65
PVT1-206ENST00000517838 HFM1A2PYH4 1435 aa10.96□□□□□ -0.65
PVT1-206ENST00000517838 PRAG1Q86YV5 1406 aa10.96□□□□□ -0.65
PVT1-206ENST00000517838 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.65
PVT1-206ENST00000517838 NUTM2FA1L443 756 aa10.95□□□□□ -0.66
PVT1-206ENST00000517838 SEPT12Q8IYM1 358 aa10.95□□□□□ -0.66
PVT1-206ENST00000517838 RALGAPBQ86X10 1494 aa10.94□□□□□ -0.66
PVT1-206ENST00000517838 RPGRIP1LQ68CZ1 1315 aa10.94□□□□□ -0.66
PVT1-206ENST00000517838 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
PVT1-206ENST00000517838 WAPLQ7Z5K2 1190 aa10.94□□□□□ -0.66
PVT1-206ENST00000517838 COL22A1Q8NFW1 1626 aaPredicted RBP10.94□□□□□ -0.66
PVT1-206ENST00000517838 SLIT2O94813 1529 aa10.94□□□□□ -0.66
PVT1-206ENST00000517838 SPATA31A3Q5VYP0 1347 aa10.93□□□□□ -0.66
PVT1-206ENST00000517838 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
PVT1-206ENST00000517838 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
PVT1-206ENST00000517838 CLTCL1P53675 1640 aa10.93□□□□□ -0.66
PVT1-206ENST00000517838 LRPPRCP42704 1394 aaKnown RBP10.92□□□□□ -0.66
PVT1-206ENST00000517838 SF3B2Q13435 895 aaKnown RBP10.92□□□□□ -0.66
PVT1-206ENST00000517838 GLI3P10071 1580 aa10.91□□□□□ -0.66
PVT1-206ENST00000517838 VPS72Q15906 364 aa10.91□□□□□ -0.66
PVT1-206ENST00000517838 KRT28Q7Z3Y7 464 aa10.91□□□□□ -0.66
PVT1-206ENST00000517838 STK26Q9P289 416 aa10.91□□□□□ -0.66
PVT1-206ENST00000517838 SPHKAPQ2M3C7 1700 aa10.91□□□□□ -0.66
PVT1-206ENST00000517838 NAIPQ13075 1403 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms