RNA–Protein interactions for RNA: ENST00000516601.1

RNU5B-3P-201, Transcript of RNA, U5B small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU5B-3P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5B-3P-201ENST00000516601 BRICD5Q6PL45 260 aa6.54□□□□□ -1.36
RNU5B-3P-201ENST00000516601 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
RNU5B-3P-201ENST00000516601 HPS1Q92902 700 aa6.54□□□□□ -1.36
RNU5B-3P-201ENST00000516601 TRIM47Q96LD4 638 aa6.54□□□□□ -1.36
RNU5B-3P-201ENST00000516601 TRIM32Q13049 653 aa6.53□□□□□ -1.36
RNU5B-3P-201ENST00000516601 TSHZ2Q9NRE2 1034 aa6.53□□□□□ -1.36
RNU5B-3P-201ENST00000516601 DAXXQ9UER7 740 aaPredicted RBP6.52□□□□□ -1.37
RNU5B-3P-201ENST00000516601 GCGRP47871 477 aa6.51□□□□□ -1.37
RNU5B-3P-201ENST00000516601 RBM26Q5T8P6 1007 aaKnown RBP6.51□□□□□ -1.37
RNU5B-3P-201ENST00000516601 SENP2Q9HC62 589 aa6.51□□□□□ -1.37
RNU5B-3P-201ENST00000516601 MSS51Q4VC12 460 aa6.5□□□□□ -1.37
RNU5B-3P-201ENST00000516601 GMPRP36959 345 aa6.49□□□□□ -1.37
RNU5B-3P-201ENST00000516601 VEGFBP49765 207 aa6.49□□□□□ -1.37
RNU5B-3P-201ENST00000516601 HIC1Q14526 733 aa6.49□□□□□ -1.37
RNU5B-3P-201ENST00000516601 PHOX2BQ99453 314 aa6.49□□□□□ -1.37
RNU5B-3P-201ENST00000516601 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
RNU5B-3P-201ENST00000516601 SALL2Q9Y467 1007 aaPredicted RBP6.48□□□□□ -1.37
RNU5B-3P-201ENST00000516601 BMP1P13497 986 aa6.47□□□□□ -1.37
RNU5B-3P-201ENST00000516601 SKOR1P84550 965 aa6.47□□□□□ -1.37
RNU5B-3P-201ENST00000516601 RC3H1Q5TC82 1133 aaKnown RBP6.47□□□□□ -1.37
RNU5B-3P-201ENST00000516601 CCDC24Q8N4L8 307 aa6.47□□□□□ -1.37
RNU5B-3P-201ENST00000516601 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
RNU5B-3P-201ENST00000516601 GNPATO15228 680 aa6.46□□□□□ -1.38
RNU5B-3P-201ENST00000516601 MMP16P51512 607 aa6.46□□□□□ -1.38
RNU5B-3P-201ENST00000516601 KIFC2Q96AC6 838 aa6.46□□□□□ -1.38
RNU5B-3P-201ENST00000516601 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
RNU5B-3P-201ENST00000516601 GPR37O15354 613 aa6.45□□□□□ -1.38
RNU5B-3P-201ENST00000516601 HLA-CQ95604 372 aa6.45□□□□□ -1.38
RNU5B-3P-201ENST00000516601 ALDH1A1P00352 501 aa6.44□□□□□ -1.38
RNU5B-3P-201ENST00000516601 SULF1Q8IWU6 871 aa6.44□□□□□ -1.38
RNU5B-3P-201ENST00000516601 ZSCAN1Q8NBB4 408 aa6.44□□□□□ -1.38
RNU5B-3P-201ENST00000516601 SLC16A10Q8TF71 515 aa6.44□□□□□ -1.38
RNU5B-3P-201ENST00000516601 NXF1Q9UBU9 619 aaKnown RBP6.44□□□□□ -1.38
RNU5B-3P-201ENST00000516601 DXOO77932 396 aaKnown RBP6.43□□□□□ -1.38
RNU5B-3P-201ENST00000516601 TRIM46Q7Z4K8 759 aa6.43□□□□□ -1.38
RNU5B-3P-201ENST00000516601 REPIN1Q9BWE0 567 aaKnown RBP6.43□□□□□ -1.38
RNU5B-3P-201ENST00000516601 ERBB4Q15303 1308 aa6.43□□□□□ -1.38
RNU5B-3P-201ENST00000516601 FAM181BA6NEQ2 426 aa6.42□□□□□ -1.38
RNU5B-3P-201ENST00000516601 Q3C1V9 767 aa6.42□□□□□ -1.38
RNU5B-3P-201ENST00000516601 USB1Q9BQ65 265 aaKnown RBP6.42□□□□□ -1.38
RNU5B-3P-201ENST00000516601 GRIPAP1Q4V328 841 aa6.41□□□□□ -1.38
RNU5B-3P-201ENST00000516601 IRF7Q92985 503 aa6.4□□□□□ -1.38
RNU5B-3P-201ENST00000516601 TESPA1A2RU30 521 aaPredicted RBP6.39□□□□□ -1.39
RNU5B-3P-201ENST00000516601 CAPN5O15484 640 aaPredicted RBP6.39□□□□□ -1.39
RNU5B-3P-201ENST00000516601 GUCA2AQ02747 115 aa6.39□□□□□ -1.39
RNU5B-3P-201ENST00000516601 H3BM21 787 aa6.38□□□□□ -1.39
RNU5B-3P-201ENST00000516601 SIAH2O43255 324 aa6.38□□□□□ -1.39
RNU5B-3P-201ENST00000516601 CD46P15529 392 aa6.38□□□□□ -1.39
RNU5B-3P-201ENST00000516601 WNT7BP56706 349 aa6.38□□□□□ -1.39
RNU5B-3P-201ENST00000516601 PTCRAQ6ISU1 281 aaPredicted RBP6.38□□□□□ -1.39
RNU5B-3P-201ENST00000516601 P3H3Q8IVL6 736 aa6.38□□□□□ -1.39
RNU5B-3P-201ENST00000516601 SYMPKQ92797 1274 aaKnown RBP6.38□□□□□ -1.39
RNU5B-3P-201ENST00000516601 KDM4AO75164 1064 aa6.37□□□□□ -1.39
RNU5B-3P-201ENST00000516601 SOBPA7XYQ1 873 aa6.36□□□□□ -1.39
RNU5B-3P-201ENST00000516601 EHBP1Q8NDI1 1231 aa6.36□□□□□ -1.39
RNU5B-3P-201ENST00000516601 ZFP42Q96MM3 310 aa6.36□□□□□ -1.39
RNU5B-3P-201ENST00000516601 WASF2Q9Y6W5 498 aa6.36□□□□□ -1.39
RNU5B-3P-201ENST00000516601 SUZ12Q15022 739 aaKnown RBP6.35□□□□□ -1.39
RNU5B-3P-201ENST00000516601 JUNDP17535 347 aa6.34□□□□□ -1.39
RNU5B-3P-201ENST00000516601 NPAS3Q8IXF0 933 aa6.34□□□□□ -1.39
RNU5B-3P-201ENST00000516601 HOXA2O43364 376 aa6.33□□□□□ -1.4
RNU5B-3P-201ENST00000516601 SMYD5Q6GMV2 418 aa6.33□□□□□ -1.4
RNU5B-3P-201ENST00000516601 NUDT12Q9BQG2 462 aa6.33□□□□□ -1.4
RNU5B-3P-201ENST00000516601 TLL2Q9Y6L7 1015 aa6.33□□□□□ -1.4
RNU5B-3P-201ENST00000516601 SH3BP2P78314 561 aa6.32□□□□□ -1.4
RNU5B-3P-201ENST00000516601 MDM2Q00987 491 aaPredicted RBP6.32□□□□□ -1.4
RNU5B-3P-201ENST00000516601 LINC01559Q495D7 138 aa6.31□□□□□ -1.4
RNU5B-3P-201ENST00000516601 GPIHBP1Q8IV16 184 aa6.31□□□□□ -1.4
RNU5B-3P-201ENST00000516601 KCTD17Q8N5Z5 321 aa6.31□□□□□ -1.4
RNU5B-3P-201ENST00000516601 PURBQ96QR8 312 aaKnown RBP6.31□□□□□ -1.4
RNU5B-3P-201ENST00000516601 USP46P62068 366 aa6.29□□□□□ -1.4
RNU5B-3P-201ENST00000516601 NNTQ13423 1086 aa6.28□□□□□ -1.4
RNU5B-3P-201ENST00000516601 MRPL14Q6P1L8 145 aaKnown RBP6.28□□□□□ -1.4
RNU5B-3P-201ENST00000516601 GSK3AP49840 483 aa6.27□□□□□ -1.41
RNU5B-3P-201ENST00000516601 RETREG3Q86VR2 466 aa6.27□□□□□ -1.41
RNU5B-3P-201ENST00000516601 BAP1Q92560 729 aa6.27□□□□□ -1.41
RNU5B-3P-201ENST00000516601 CCNYL3P0C7X3 344 aa6.26□□□□□ -1.41
RNU5B-3P-201ENST00000516601 TIMP2P16035 220 aa6.26□□□□□ -1.41
RNU5B-3P-201ENST00000516601 WDR4P57081 412 aaKnown RBP6.26□□□□□ -1.41
RNU5B-3P-201ENST00000516601 UNC93B1Q9H1C4 597 aa6.26□□□□□ -1.41
RNU5B-3P-201ENST00000516601 PCDHGC3Q9UN70 934 aa6.26□□□□□ -1.41
RNU5B-3P-201ENST00000516601 C6orf229H3BNL8 230 aa6.25□□□□□ -1.41
RNU5B-3P-201ENST00000516601 MS4A1P11836 297 aa6.25□□□□□ -1.41
RNU5B-3P-201ENST00000516601 MAP2K5Q13163 448 aa6.25□□□□□ -1.41
RNU5B-3P-201ENST00000516601 SCARF1Q14162 830 aa6.25□□□□□ -1.41
RNU5B-3P-201ENST00000516601 VSIG8P0DPA2 414 aa6.24□□□□□ -1.41
RNU5B-3P-201ENST00000516601 C6orf118Q5T5N4 469 aa6.24□□□□□ -1.41
RNU5B-3P-201ENST00000516601 IRF6O14896 467 aa6.23□□□□□ -1.41
RNU5B-3P-201ENST00000516601 FDX1P10109 184 aa6.23□□□□□ -1.41
RNU5B-3P-201ENST00000516601 KCNMA1Q12791 1236 aa6.23□□□□□ -1.41
RNU5B-3P-201ENST00000516601 NUTM1Q86Y26 1132 aa6.23□□□□□ -1.41
RNU5B-3P-201ENST00000516601 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
RNU5B-3P-201ENST00000516601 ADH1CP00326 375 aa6.22□□□□□ -1.41
RNU5B-3P-201ENST00000516601 ZNF511Q8NB15 262 aa6.22□□□□□ -1.41
RNU5B-3P-201ENST00000516601 KLF16Q9BXK1 252 aaPredicted RBP6.22□□□□□ -1.41
RNU5B-3P-201ENST00000516601 FAM217BQ9NTX9 383 aaPredicted RBP6.22□□□□□ -1.41
RNU5B-3P-201ENST00000516601 EVA1BQ9NVM1 165 aa6.22□□□□□ -1.41
RNU5B-3P-201ENST00000516601 PLEKHG3A1L390 1219 aa6.21□□□□□ -1.42
RNU5B-3P-201ENST00000516601 MAN1A2O60476 641 aa6.21□□□□□ -1.42
RNU5B-3P-201ENST00000516601 PPFIA3O75145 1194 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms