RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 GRIPAP1Q4V328 841 aa6.58□□□□□ -1.36
SNORA40.14-201ENST00000516543 SYMPKQ92797 1274 aaKnown RBP6.58□□□□□ -1.36
SNORA40.14-201ENST00000516543 FAM217BQ9NTX9 383 aaPredicted RBP6.58□□□□□ -1.36
SNORA40.14-201ENST00000516543 HOXA2O43364 376 aa6.57□□□□□ -1.36
SNORA40.14-201ENST00000516543 LMOD2Q6P5Q4 547 aa6.57□□□□□ -1.36
SNORA40.14-201ENST00000516543 GPCPD1Q9NPB8 672 aa6.57□□□□□ -1.36
SNORA40.14-201ENST00000516543 MMP16P51512 607 aa6.56□□□□□ -1.36
SNORA40.14-201ENST00000516543 ZNF775Q96BV0 537 aaPredicted RBP6.56□□□□□ -1.36
SNORA40.14-201ENST00000516543 USB1Q9BQ65 265 aaKnown RBP6.56□□□□□ -1.36
SNORA40.14-201ENST00000516543 AAASQ9NRG9 546 aa6.56□□□□□ -1.36
SNORA40.14-201ENST00000516543 TOR4AQ9NXH8 423 aa6.56□□□□□ -1.36
SNORA40.14-201ENST00000516543 DACH1Q9UI36 760 aa6.56□□□□□ -1.36
SNORA40.14-201ENST00000516543 CD2BP2O95400 341 aaKnown RBP6.55□□□□□ -1.36
SNORA40.14-201ENST00000516543 Q3C1V9 767 aa6.55□□□□□ -1.36
SNORA40.14-201ENST00000516543 ZBTB24O43167 697 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.14-201ENST00000516543 DXOO77932 396 aaKnown RBP6.54□□□□□ -1.36
SNORA40.14-201ENST00000516543 CLCN1P35523 988 aa6.54□□□□□ -1.36
SNORA40.14-201ENST00000516543 USP46P62068 366 aa6.53□□□□□ -1.36
SNORA40.14-201ENST00000516543 TRIM32Q13049 653 aa6.53□□□□□ -1.36
SNORA40.14-201ENST00000516543 CCDC24Q8N4L8 307 aa6.53□□□□□ -1.36
SNORA40.14-201ENST00000516543 PCDHGC3Q9UN70 934 aa6.53□□□□□ -1.36
SNORA40.14-201ENST00000516543 ZMYND10O75800 440 aa6.52□□□□□ -1.37
SNORA40.14-201ENST00000516543 SSTR3P32745 418 aaPredicted RBP6.52□□□□□ -1.37
SNORA40.14-201ENST00000516543 BARGINQ6ZT62 677 aa6.52□□□□□ -1.37
SNORA40.14-201ENST00000516543 CYP4X1Q8N118 509 aa6.52□□□□□ -1.37
SNORA40.14-201ENST00000516543 KRI1Q8N9T8 703 aaKnown RBP6.52□□□□□ -1.37
SNORA40.14-201ENST00000516543 ZC3H15Q8WU90 426 aaKnown RBP6.52□□□□□ -1.37
SNORA40.14-201ENST00000516543 NDUFV2P19404 249 aa6.51□□□□□ -1.37
SNORA40.14-201ENST00000516543 SKOR1P84550 965 aa6.51□□□□□ -1.37
SNORA40.14-201ENST00000516543 NUTM1Q86Y26 1132 aa6.51□□□□□ -1.37
SNORA40.14-201ENST00000516543 MRGPRX2Q96LB1 330 aa6.51□□□□□ -1.37
SNORA40.14-201ENST00000516543 J3QL48 77 aa6.5□□□□□ -1.37
SNORA40.14-201ENST00000516543 WNT7AO00755 349 aa6.5□□□□□ -1.37
SNORA40.14-201ENST00000516543 AVPP01185 164 aa6.5□□□□□ -1.37
SNORA40.14-201ENST00000516543 SPIRE2Q8WWL2 714 aa6.5□□□□□ -1.37
SNORA40.14-201ENST00000516543 TTC24A2A3L6 582 aaPredicted RBP6.49□□□□□ -1.37
SNORA40.14-201ENST00000516543 FDX1P10109 184 aa6.49□□□□□ -1.37
SNORA40.14-201ENST00000516543 SMPD1P17405 629 aa6.49□□□□□ -1.37
SNORA40.14-201ENST00000516543 PTCRAQ6ISU1 281 aaPredicted RBP6.49□□□□□ -1.37
SNORA40.14-201ENST00000516543 MOXD2PA6NHM9 499 aa6.48□□□□□ -1.37
SNORA40.14-201ENST00000516543 JUNDP17535 347 aa6.48□□□□□ -1.37
SNORA40.14-201ENST00000516543 TTLL12Q14166 644 aaPredicted RBP6.48□□□□□ -1.37
SNORA40.14-201ENST00000516543 GIGYF2Q6Y7W6 1299 aaKnown RBP6.48□□□□□ -1.37
SNORA40.14-201ENST00000516543 CRIPAKQ8N1N5 446 aa6.48□□□□□ -1.37
SNORA40.14-201ENST00000516543 GMPR2Q9P2T1 348 aaKnown RBP6.48□□□□□ -1.37
SNORA40.14-201ENST00000516543 C6orf229H3BNL8 230 aa6.47□□□□□ -1.37
SNORA40.14-201ENST00000516543 AXIN1O15169 862 aa6.47□□□□□ -1.37
SNORA40.14-201ENST00000516543 AMHR2Q16671 573 aa6.47□□□□□ -1.37
SNORA40.14-201ENST00000516543 RC3H1Q5TC82 1133 aaKnown RBP6.47□□□□□ -1.37
SNORA40.14-201ENST00000516543 RETREG3Q86VR2 466 aa6.47□□□□□ -1.37
SNORA40.14-201ENST00000516543 SNIP1Q8TAD8 396 aaKnown RBP6.46□□□□□ -1.38
SNORA40.14-201ENST00000516543 NUDT12Q9BQG2 462 aa6.46□□□□□ -1.38
SNORA40.14-201ENST00000516543 HPS1Q92902 700 aa6.45□□□□□ -1.38
SNORA40.14-201ENST00000516543 BEGAINQ9BUH8 593 aa6.45□□□□□ -1.38
SNORA40.14-201ENST00000516543 MS4A1P11836 297 aa6.44□□□□□ -1.38
SNORA40.14-201ENST00000516543 SMCPP49901 116 aaPredicted RBP6.44□□□□□ -1.38
SNORA40.14-201ENST00000516543 CTC1Q2NKJ3 1217 aa6.44□□□□□ -1.38
SNORA40.14-201ENST00000516543 PARP9Q8IXQ6 854 aa6.44□□□□□ -1.38
SNORA40.14-201ENST00000516543 TRIM66O15016 1216 aa6.43□□□□□ -1.38
SNORA40.14-201ENST00000516543 PCDHB15Q9Y5E8 787 aa6.43□□□□□ -1.38
SNORA40.14-201ENST00000516543 WNT7BP56706 349 aa6.42□□□□□ -1.38
SNORA40.14-201ENST00000516543 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
SNORA40.14-201ENST00000516543 PRR7Q8TB68 274 aa6.42□□□□□ -1.38
SNORA40.14-201ENST00000516543 TBC1D2Q9BYX2 928 aa6.42□□□□□ -1.38
SNORA40.14-201ENST00000516543 C11orf95C9JLR9 678 aaPredicted RBP6.41□□□□□ -1.38
SNORA40.14-201ENST00000516543 SIAH2O43255 324 aa6.41□□□□□ -1.38
SNORA40.14-201ENST00000516543 CCNYL3P0C7X3 344 aa6.41□□□□□ -1.38
SNORA40.14-201ENST00000516543 SH3BP2P78314 561 aa6.41□□□□□ -1.38
SNORA40.14-201ENST00000516543 LINC01559Q495D7 138 aa6.41□□□□□ -1.38
SNORA40.14-201ENST00000516543 ATP13A2Q9NQ11 1180 aa6.41□□□□□ -1.38
SNORA40.14-201ENST00000516543 ALDH1A1P00352 501 aa6.4□□□□□ -1.38
SNORA40.14-201ENST00000516543 SNRPBP14678 240 aaKnown RBP6.4□□□□□ -1.38
SNORA40.14-201ENST00000516543 MTMR2Q13614 643 aa6.4□□□□□ -1.38
SNORA40.14-201ENST00000516543 UNC93B1Q9H1C4 597 aa6.4□□□□□ -1.38
SNORA40.14-201ENST00000516543 EVA1BQ9NVM1 165 aa6.4□□□□□ -1.38
SNORA40.14-201ENST00000516543 CFAP99D6REC4 459 aa6.39□□□□□ -1.39
SNORA40.14-201ENST00000516543 PTPRNQ16849 979 aa6.39□□□□□ -1.39
SNORA40.14-201ENST00000516543 RSBN1LQ6PCB5 846 aaPredicted RBP6.39□□□□□ -1.39
SNORA40.14-201ENST00000516543 TREML4Q6UXN2 200 aa6.39□□□□□ -1.39
SNORA40.14-201ENST00000516543 EHBP1Q8NDI1 1231 aa6.39□□□□□ -1.39
SNORA40.14-201ENST00000516543 BAP1Q92560 729 aa6.39□□□□□ -1.39
SNORA40.14-201ENST00000516543 KCNH2Q12809 1159 aa6.38□□□□□ -1.39
SNORA40.14-201ENST00000516543 CABLES1Q8TDN4 633 aa6.38□□□□□ -1.39
SNORA40.14-201ENST00000516543 AK7Q96M32 723 aa6.38□□□□□ -1.39
SNORA40.14-201ENST00000516543 TLL2Q9Y6L7 1015 aa6.38□□□□□ -1.39
SNORA40.14-201ENST00000516543 HRCP23327 699 aa6.37□□□□□ -1.39
SNORA40.14-201ENST00000516543 CSPP1Q1MSJ5 1256 aa6.37□□□□□ -1.39
SNORA40.14-201ENST00000516543 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
SNORA40.14-201ENST00000516543 SLC24A3Q9HC58 644 aa6.37□□□□□ -1.39
SNORA40.14-201ENST00000516543 SPTLC1O15269 473 aa6.36□□□□□ -1.39
SNORA40.14-201ENST00000516543 BMP1P13497 986 aa6.36□□□□□ -1.39
SNORA40.14-201ENST00000516543 PDE4DQ08499 809 aa6.36□□□□□ -1.39
SNORA40.14-201ENST00000516543 NFX1Q12986 1120 aaKnown RBP6.36□□□□□ -1.39
SNORA40.14-201ENST00000516543 LIMD1Q9UGP4 676 aa6.36□□□□□ -1.39
SNORA40.14-201ENST00000516543 PER1O15534 1290 aaPredicted RBP6.35□□□□□ -1.39
SNORA40.14-201ENST00000516543 DESI1Q6ICB0 168 aa6.35□□□□□ -1.39
SNORA40.14-201ENST00000516543 LYPD8Q6UX82 237 aa6.35□□□□□ -1.39
SNORA40.14-201ENST00000516543 RIC3Q7Z5B4 369 aa6.35□□□□□ -1.39
SNORA40.14-201ENST00000516543 ZNF511Q8NB15 262 aa6.35□□□□□ -1.39
SNORA40.14-201ENST00000516543 TRIM47Q96LD4 638 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms