RNA–Protein interactions for RNA: ENST00000515070.1

ABCC3-215, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-215ENST00000515070 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
ABCC3-215ENST00000515070 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
ABCC3-215ENST00000515070 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
ABCC3-215ENST00000515070 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.5□□□□□ -0.41
ABCC3-215ENST00000515070 MST1RQ04912 1400 aa12.49□□□□□ -0.41
ABCC3-215ENST00000515070 GPRASP1Q5JY77 1395 aa12.49□□□□□ -0.41
ABCC3-215ENST00000515070 PLEKHH1Q9ULM0 1364 aa12.48□□□□□ -0.41
ABCC3-215ENST00000515070 HSPA1LP34931 641 aa12.48□□□□□ -0.41
ABCC3-215ENST00000515070 NBPF8Q3BBV2 869 aa12.48□□□□□ -0.41
ABCC3-215ENST00000515070 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
ABCC3-215ENST00000515070 CDC42BPGQ6DT37 1551 aa12.47□□□□□ -0.41
ABCC3-215ENST00000515070 C1orf167Q5SNV9 1468 aa12.47□□□□□ -0.41
ABCC3-215ENST00000515070 CARD11Q9BXL7 1154 aa12.47□□□□□ -0.41
ABCC3-215ENST00000515070 CENPJQ9HC77 1338 aaPredicted RBP12.46□□□□□ -0.41
ABCC3-215ENST00000515070 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.41
ABCC3-215ENST00000515070 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
ABCC3-215ENST00000515070 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
ABCC3-215ENST00000515070 ESCO1Q5FWF5 840 aa12.44□□□□□ -0.42
ABCC3-215ENST00000515070 NALCNQ8IZF0 1738 aa12.44□□□□□ -0.42
ABCC3-215ENST00000515070 ANKARQ7Z5J8 1434 aa12.44□□□□□ -0.42
ABCC3-215ENST00000515070 NPHP3Q7Z494 1330 aa12.43□□□□□ -0.42
ABCC3-215ENST00000515070 MINK1Q8N4C8 1332 aaPredicted RBP12.43□□□□□ -0.42
ABCC3-215ENST00000515070 ROBO1Q9Y6N7 1651 aa12.43□□□□□ -0.42
ABCC3-215ENST00000515070 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
ABCC3-215ENST00000515070 TRPM1Q7Z4N2 1603 aa12.43□□□□□ -0.42
ABCC3-215ENST00000515070 ADGRB2O60241 1585 aa12.43□□□□□ -0.42
ABCC3-215ENST00000515070 ORAI2Q96SN7 254 aa12.42□□□□□ -0.42
ABCC3-215ENST00000515070 SBNO2Q9Y2G9 1366 aa12.42□□□□□ -0.42
ABCC3-215ENST00000515070 HIRIP3Q9BW71 556 aaPredicted RBP12.41□□□□□ -0.42
ABCC3-215ENST00000515070 CDK19Q9BWU1 502 aa12.41□□□□□ -0.42
ABCC3-215ENST00000515070 JCADQ9P266 1359 aa12.41□□□□□ -0.42
ABCC3-215ENST00000515070 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
ABCC3-215ENST00000515070 EVC2Q86UK5 1308 aa12.4□□□□□ -0.42
ABCC3-215ENST00000515070 PSME1Q06323 249 aa12.4□□□□□ -0.42
ABCC3-215ENST00000515070 PHF8Q9UPP1 1060 aa12.4□□□□□ -0.42
ABCC3-215ENST00000515070 CCDC61Q9Y6R9 512 aa12.4□□□□□ -0.42
ABCC3-215ENST00000515070 SOS2Q07890 1332 aaPredicted RBP12.39□□□□□ -0.43
ABCC3-215ENST00000515070 NUDT16Q96DE0 195 aaKnown RBP12.39□□□□□ -0.43
ABCC3-215ENST00000515070 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
ABCC3-215ENST00000515070 ARHGEF28Q8N1W1 1705 aaKnown RBP12.39□□□□□ -0.43
ABCC3-215ENST00000515070 SPATA31A6Q5VVP1 1343 aa12.38□□□□□ -0.43
ABCC3-215ENST00000515070 TULP4Q9NRJ4 1543 aa12.38□□□□□ -0.43
ABCC3-215ENST00000515070 NUTM2FA1L443 756 aa12.38□□□□□ -0.43
ABCC3-215ENST00000515070 FOXO3O43524 673 aa12.38□□□□□ -0.43
ABCC3-215ENST00000515070 SRPK2P78362 688 aaKnown RBP12.38□□□□□ -0.43
ABCC3-215ENST00000515070 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
ABCC3-215ENST00000515070 PLEKHG3A1L390 1219 aa12.36□□□□□ -0.43
ABCC3-215ENST00000515070 CDCA8Q53HL2 280 aa12.35□□□□□ -0.43
ABCC3-215ENST00000515070 KRT28Q7Z3Y7 464 aa12.35□□□□□ -0.43
ABCC3-215ENST00000515070 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
ABCC3-215ENST00000515070 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
ABCC3-215ENST00000515070 ATAD2Q6PL18 1390 aa12.34□□□□□ -0.43
ABCC3-215ENST00000515070 ST20-MTHFSA0A0A6YYL1 179 aa12.34□□□□□ -0.43
ABCC3-215ENST00000515070 KIF1AQ12756 1690 aa12.34□□□□□ -0.43
ABCC3-215ENST00000515070 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
ABCC3-215ENST00000515070 COL16A1Q07092 1604 aaPredicted RBP12.33□□□□□ -0.43
ABCC3-215ENST00000515070 NHSL1Q5SYE7 1610 aa12.33□□□□□ -0.43
ABCC3-215ENST00000515070 SBNO1A3KN83 1393 aa12.33□□□□□ -0.44
ABCC3-215ENST00000515070 BRD4O60885 1362 aaPredicted RBP12.33□□□□□ -0.44
ABCC3-215ENST00000515070 USP47Q96K76 1375 aa12.33□□□□□ -0.44
ABCC3-215ENST00000515070 PMFBP1Q8TBY8 1022 aa12.33□□□□□ -0.44
ABCC3-215ENST00000515070 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
ABCC3-215ENST00000515070 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
ABCC3-215ENST00000515070 ATP7BP35670 1465 aa12.33□□□□□ -0.44
ABCC3-215ENST00000515070 TMF1P82094 1093 aa12.32□□□□□ -0.44
ABCC3-215ENST00000515070 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
ABCC3-215ENST00000515070 TESK2Q96S53 571 aa12.32□□□□□ -0.44
ABCC3-215ENST00000515070 SPATA31A3Q5VYP0 1347 aa12.32□□□□□ -0.44
ABCC3-215ENST00000515070 POLR3AO14802 1390 aaPredicted RBP12.31□□□□□ -0.44
ABCC3-215ENST00000515070 ARHGEF10O15013 1369 aa12.31□□□□□ -0.44
ABCC3-215ENST00000515070 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
ABCC3-215ENST00000515070 PXDNQ92626 1479 aa12.31□□□□□ -0.44
ABCC3-215ENST00000515070 PNPLA6Q8IY17 1366 aa12.3□□□□□ -0.44
ABCC3-215ENST00000515070 QRICH2Q9H0J4 1663 aa12.3□□□□□ -0.44
ABCC3-215ENST00000515070 ACEP12821 1306 aa12.3□□□□□ -0.44
ABCC3-215ENST00000515070 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
ABCC3-215ENST00000515070 PPIP5K1Q6PFW1 1433 aa12.29□□□□□ -0.44
ABCC3-215ENST00000515070 CABP1Q9NZU7 370 aa12.29□□□□□ -0.44
ABCC3-215ENST00000515070 USP32Q8NFA0 1604 aa12.29□□□□□ -0.44
ABCC3-215ENST00000515070 XPCQ01831 940 aaPredicted RBP12.28□□□□□ -0.44
ABCC3-215ENST00000515070 PHF23Q9BUL5 403 aaPredicted RBP12.28□□□□□ -0.44
ABCC3-215ENST00000515070 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
ABCC3-215ENST00000515070 SHPRHQ149N8 1683 aa12.27□□□□□ -0.45
ABCC3-215ENST00000515070 MEX3CQ5U5Q3 659 aaKnown RBP12.27□□□□□ -0.45
ABCC3-215ENST00000515070 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.45
ABCC3-215ENST00000515070 ITSN1Q15811 1721 aa12.27□□□□□ -0.45
ABCC3-215ENST00000515070 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
ABCC3-215ENST00000515070 DISP3Q9P2K9 1392 aa12.26□□□□□ -0.45
ABCC3-215ENST00000515070 LMOD2Q6P5Q4 547 aa12.25□□□□□ -0.45
ABCC3-215ENST00000515070 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
ABCC3-215ENST00000515070 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
ABCC3-215ENST00000515070 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
ABCC3-215ENST00000515070 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
ABCC3-215ENST00000515070 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
ABCC3-215ENST00000515070 ZNF772Q68DY9 489 aaPredicted RBP12.24□□□□□ -0.45
ABCC3-215ENST00000515070 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
ABCC3-215ENST00000515070 TMC1Q8TDI8 760 aa12.24□□□□□ -0.45
ABCC3-215ENST00000515070 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
ABCC3-215ENST00000515070 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
ABCC3-215ENST00000515070 NLRP13Q86W25 1043 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms