RNA–Protein interactions for RNA: ENST00000514528.5

MATR3-225, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-225ENST00000514528 ATRNO75882 1429 aa25.65■■□□□ 1.7
MATR3-225ENST00000514528 USP21Q9UK80 565 aa25.64■■□□□ 1.7
MATR3-225ENST00000514528 PXDNQ92626 1479 aa25.64■■□□□ 1.69
MATR3-225ENST00000514528 TRPC5Q9UL62 973 aaPredicted RBP25.63■■□□□ 1.69
MATR3-225ENST00000514528 ATAD2Q6PL18 1390 aa25.62■■□□□ 1.69
MATR3-225ENST00000514528 TECPR2O15040 1411 aa25.62■■□□□ 1.69
MATR3-225ENST00000514528 EP400Q96L91 3159 aa25.61■■□□□ 1.69
MATR3-225ENST00000514528 PPLO60437 1756 aa25.61■■□□□ 1.69
MATR3-225ENST00000514528 NPHP3Q7Z494 1330 aa25.61■■□□□ 1.69
MATR3-225ENST00000514528 BCL9LQ86UU0 1499 aa25.6■■□□□ 1.69
MATR3-225ENST00000514528 SLC4A1APQ9BWU0 796 aaKnown RBP25.59■■□□□ 1.69
MATR3-225ENST00000514528 SPATA31E1Q6ZUB1 1445 aa25.56■■□□□ 1.68
MATR3-225ENST00000514528 ADGRF5Q8IZF2 1346 aa25.56■■□□□ 1.68
MATR3-225ENST00000514528 ESCO1Q5FWF5 840 aa25.55■■□□□ 1.68
MATR3-225ENST00000514528 LRPPRCP42704 1394 aaKnown RBP25.54■■□□□ 1.68
MATR3-225ENST00000514528 ABCC11Q96J66 1382 aa25.54■■□□□ 1.68
MATR3-225ENST00000514528 FOXO3O43524 673 aa25.51■■□□□ 1.67
MATR3-225ENST00000514528 ANKRD30BQ9BXX2 1392 aa25.5■■□□□ 1.67
MATR3-225ENST00000514528 WAPLQ7Z5K2 1190 aa25.49■■□□□ 1.67
MATR3-225ENST00000514528 PIK3C2GO75747 1445 aa25.48■■□□□ 1.67
MATR3-225ENST00000514528 PLEKHH1Q9ULM0 1364 aa25.48■■□□□ 1.67
MATR3-225ENST00000514528 FOXD1Q16676 465 aa25.48■■□□□ 1.67
MATR3-225ENST00000514528 CCDC144AA2RUR9 1427 aa25.47■■□□□ 1.67
MATR3-225ENST00000514528 XPCQ01831 940 aaPredicted RBP25.47■■□□□ 1.67
MATR3-225ENST00000514528 GJD4Q96KN9 370 aaPredicted RBP25.47■■□□□ 1.67
MATR3-225ENST00000514528 SLIT2O94813 1529 aa25.47■■□□□ 1.67
MATR3-225ENST00000514528 CCDC125Q86Z20 511 aa25.46■■□□□ 1.67
MATR3-225ENST00000514528 SPATA31A3Q5VYP0 1347 aa25.45■■□□□ 1.66
MATR3-225ENST00000514528 KNDC1Q76NI1 1749 aa25.45■■□□□ 1.66
MATR3-225ENST00000514528 IFT172Q9UG01 1749 aa25.44■■□□□ 1.66
MATR3-225ENST00000514528 MARF1Q9Y4F3 1742 aaKnown RBP25.44■■□□□ 1.66
MATR3-225ENST00000514528 SIRT1Q96EB6 747 aa25.44■■□□□ 1.66
MATR3-225ENST00000514528 STK26Q9P289 416 aa25.43■■□□□ 1.66
MATR3-225ENST00000514528 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.43■■□□□ 1.66
MATR3-225ENST00000514528 TMEM132EQ6IEE7 984 aa25.42■■□□□ 1.66
MATR3-225ENST00000514528 YTHDC2Q9H6S0 1430 aaKnown RBP25.42■■□□□ 1.66
MATR3-225ENST00000514528 UNC5CLQ8IV45 518 aa25.41■■□□□ 1.66
MATR3-225ENST00000514528 RALGAPBQ86X10 1494 aa25.4■■□□□ 1.66
MATR3-225ENST00000514528 FMN2Q9NZ56 1722 aa25.4■■□□□ 1.66
MATR3-225ENST00000514528 GLI3P10071 1580 aa25.4■■□□□ 1.66
MATR3-225ENST00000514528 RGL3Q3MIN7 710 aa25.4■■□□□ 1.66
MATR3-225ENST00000514528 NUTM2FA1L443 756 aa25.39■■□□□ 1.66
MATR3-225ENST00000514528 ZRANB1Q9UGI0 708 aa25.39■■□□□ 1.66
MATR3-225ENST00000514528 KIF1AQ12756 1690 aa25.39■■□□□ 1.65
MATR3-225ENST00000514528 MPHOSPH9Q99550 1183 aa25.38■■□□□ 1.65
MATR3-225ENST00000514528 NRXN1Q9ULB1 1477 aa25.38■■□□□ 1.65
MATR3-225ENST00000514528 USP32Q8NFA0 1604 aa25.36■■□□□ 1.65
MATR3-225ENST00000514528 C14orf93Q9H972 538 aaKnown RBP25.35■■□□□ 1.65
MATR3-225ENST00000514528 KRT28Q7Z3Y7 464 aa25.34■■□□□ 1.65
MATR3-225ENST00000514528 BLMP54132 1417 aaPredicted RBP25.34■■□□□ 1.65
MATR3-225ENST00000514528 TNS3Q68CZ2 1445 aa25.34■■□□□ 1.65
MATR3-225ENST00000514528 ONECUT3O60422 494 aaPredicted RBP25.32■■□□□ 1.64
MATR3-225ENST00000514528 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
MATR3-225ENST00000514528 PHF8Q9UPP1 1060 aa25.31■■□□□ 1.64
MATR3-225ENST00000514528 VPS72Q15906 364 aa25.3■■□□□ 1.64
MATR3-225ENST00000514528 PSME1Q06323 249 aa25.26■■□□□ 1.63
MATR3-225ENST00000514528 CFAP70Q5T0N1 1121 aa25.25■■□□□ 1.63
MATR3-225ENST00000514528 SEPT12Q8IYM1 358 aa25.25■■□□□ 1.63
MATR3-225ENST00000514528 DHX57Q6P158 1386 aaKnown RBP25.25■■□□□ 1.63
MATR3-225ENST00000514528 DLC1Q96QB1 1528 aa25.24■■□□□ 1.63
MATR3-225ENST00000514528 ANKARQ7Z5J8 1434 aa25.24■■□□□ 1.63
MATR3-225ENST00000514528 ARHGEF10O15013 1369 aa25.24■■□□□ 1.63
MATR3-225ENST00000514528 CABLES1Q8TDN4 633 aa25.24■■□□□ 1.63
MATR3-225ENST00000514528 NWD2Q9ULI1 1742 aa25.23■■□□□ 1.63
MATR3-225ENST00000514528 PRAM1Q96QH2 718 aa25.22■■□□□ 1.63
MATR3-225ENST00000514528 ABCA3Q99758 1704 aa25.21■■□□□ 1.63
MATR3-225ENST00000514528 ACIN1Q9UKV3 1341 aaKnown RBP25.21■■□□□ 1.63
MATR3-225ENST00000514528 DEFB132Q7Z7B7 95 aa25.21■■□□□ 1.63
MATR3-225ENST00000514528 ADGRB2O60241 1585 aa25.21■■□□□ 1.63
MATR3-225ENST00000514528 PLCH1Q4KWH8 1693 aa25.2■■□□□ 1.62
MATR3-225ENST00000514528 BRWD3Q6RI45 1802 aa25.19■■□□□ 1.62
MATR3-225ENST00000514528 ADGRB1O14514 1584 aa25.19■■□□□ 1.62
MATR3-225ENST00000514528 FAM83GA6ND36 823 aa25.19■■□□□ 1.62
MATR3-225ENST00000514528 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
MATR3-225ENST00000514528 KRT27Q7Z3Y8 459 aa25.16■■□□□ 1.62
MATR3-225ENST00000514528 HAP1P54257 671 aaPredicted RBP25.15■■□□□ 1.62
MATR3-225ENST00000514528 SAFB2Q14151 953 aaKnown RBP eCLIP25.14■■□□□ 1.62
MATR3-225ENST00000514528 TRPM3Q9HCF6 1732 aaPredicted RBP25.14■■□□□ 1.61
MATR3-225ENST00000514528 PMFBP1Q8TBY8 1022 aa25.13■■□□□ 1.61
MATR3-225ENST00000514528 NRAPQ86VF7 1730 aa25.12■■□□□ 1.61
MATR3-225ENST00000514528 PRR36Q9H6K5 1346 aa25.12■■□□□ 1.61
MATR3-225ENST00000514528 SF3B2Q13435 895 aaKnown RBP25.11■■□□□ 1.61
MATR3-225ENST00000514528 ALS2Q96Q42 1657 aa25.1■■□□□ 1.61
MATR3-225ENST00000514528 POGKQ9P215 609 aa25.1■■□□□ 1.61
MATR3-225ENST00000514528 LRP5O75197 1615 aa25.09■■□□□ 1.61
MATR3-225ENST00000514528 LMOD2Q6P5Q4 547 aa25.09■■□□□ 1.61
MATR3-225ENST00000514528 CCDC9Q9Y3X0 531 aaKnown RBP25.09■■□□□ 1.61
MATR3-225ENST00000514528 TULP4Q9NRJ4 1543 aa25.08■■□□□ 1.61
MATR3-225ENST00000514528 EIF3AQ14152 1382 aaKnown RBP25.07■■□□□ 1.6
MATR3-225ENST00000514528 BTG4Q9NY30 223 aa25.07■■□□□ 1.6
MATR3-225ENST00000514528 FAM98CQ17RN3 349 aaKnown RBP25.06■■□□□ 1.6
MATR3-225ENST00000514528 GPRASP1Q5JY77 1395 aa25.05■■□□□ 1.6
MATR3-225ENST00000514528 PLEKHG5O94827 1062 aa25.05■■□□□ 1.6
MATR3-225ENST00000514528 SPATA31A5Q5VU36 1347 aa25.05■■□□□ 1.6
MATR3-225ENST00000514528 SPATA31A7Q8IWB4 1347 aa25.05■■□□□ 1.6
MATR3-225ENST00000514528 COL14A1Q05707 1796 aaKnown RBP25.05■■□□□ 1.6
MATR3-225ENST00000514528 WASLO00401 505 aaPredicted RBP25.04■■□□□ 1.6
MATR3-225ENST00000514528 HIRIP3Q9BW71 556 aaPredicted RBP25.04■■□□□ 1.6
MATR3-225ENST00000514528 TRAK1Q9UPV9 953 aa25.04■■□□□ 1.6
MATR3-225ENST00000514528 DISP2A7MBM2 1401 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms