RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 SLC27A5Q9Y2P5 690 aa8.61□□□□□ -1.03
PDLIM5-218ENST00000513341 GCGRP47871 477 aa8.6□□□□□ -1.03
PDLIM5-218ENST00000513341 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
PDLIM5-218ENST00000513341 MMP16P51512 607 aa8.58□□□□□ -1.04
PDLIM5-218ENST00000513341 RDH13Q8NBN7 331 aa8.58□□□□□ -1.04
PDLIM5-218ENST00000513341 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-218ENST00000513341 TRIM32Q13049 653 aa8.57□□□□□ -1.04
PDLIM5-218ENST00000513341 SULF1Q8IWU6 871 aa8.57□□□□□ -1.04
PDLIM5-218ENST00000513341 NPAS3Q8IXF0 933 aa8.57□□□□□ -1.04
PDLIM5-218ENST00000513341 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
PDLIM5-218ENST00000513341 MRGPRX2Q96LB1 330 aa8.56□□□□□ -1.04
PDLIM5-218ENST00000513341 GRIPAP1Q4V328 841 aa8.55□□□□□ -1.04
PDLIM5-218ENST00000513341 Q3C1V9 767 aa8.54□□□□□ -1.04
PDLIM5-218ENST00000513341 SLC16A10Q8TF71 515 aa8.54□□□□□ -1.04
PDLIM5-218ENST00000513341 DDX11L8A8MPP1 907 aa8.53□□□□□ -1.04
PDLIM5-218ENST00000513341 J3QL48 77 aa8.53□□□□□ -1.04
PDLIM5-218ENST00000513341 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
PDLIM5-218ENST00000513341 GNPATO15228 680 aa8.52□□□□□ -1.05
PDLIM5-218ENST00000513341 WNT7BP56706 349 aa8.52□□□□□ -1.05
PDLIM5-218ENST00000513341 RNF19BQ6ZMZ0 732 aa8.52□□□□□ -1.05
PDLIM5-218ENST00000513341 HPS1Q92902 700 aa8.52□□□□□ -1.05
PDLIM5-218ENST00000513341 FECHP22830 423 aa8.51□□□□□ -1.05
PDLIM5-218ENST00000513341 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-218ENST00000513341 NXF1Q9UBU9 619 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-218ENST00000513341 CCDC180Q9P1Z9 1646 aa8.51□□□□□ -1.05
PDLIM5-218ENST00000513341 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-218ENST00000513341 SEMA3EO15041 775 aa8.48□□□□□ -1.05
PDLIM5-218ENST00000513341 GPR37O15354 613 aa8.48□□□□□ -1.05
PDLIM5-218ENST00000513341 ZSCAN1Q8NBB4 408 aa8.48□□□□□ -1.05
PDLIM5-218ENST00000513341 RC3H1Q5TC82 1133 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-218ENST00000513341 IRF7Q92985 503 aa8.47□□□□□ -1.05
PDLIM5-218ENST00000513341 USB1Q9BQ65 265 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-218ENST00000513341 GMPRP36959 345 aa8.45□□□□□ -1.06
PDLIM5-218ENST00000513341 SKOR1P84550 965 aa8.45□□□□□ -1.06
PDLIM5-218ENST00000513341 SMYD5Q6GMV2 418 aa8.45□□□□□ -1.06
PDLIM5-218ENST00000513341 TESPA1A2RU30 521 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-218ENST00000513341 PHOX2BQ99453 314 aa8.44□□□□□ -1.06
PDLIM5-218ENST00000513341 TSHZ2Q9NRE2 1034 aa8.44□□□□□ -1.06
PDLIM5-218ENST00000513341 H3BM21 787 aa8.43□□□□□ -1.06
PDLIM5-218ENST00000513341 SIAH2O43255 324 aa8.42□□□□□ -1.06
PDLIM5-218ENST00000513341 CD46P15529 392 aa8.42□□□□□ -1.06
PDLIM5-218ENST00000513341 USP46P62068 366 aa8.41□□□□□ -1.06
PDLIM5-218ENST00000513341 SUZ12Q15022 739 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-218ENST00000513341 AMER1Q5JTC6 1135 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-218ENST00000513341 RBM26Q5T8P6 1007 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-218ENST00000513341 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
PDLIM5-218ENST00000513341 NLRP7Q8WX94 980 aa8.4□□□□□ -1.06
PDLIM5-218ENST00000513341 ALDH1A1P00352 501 aa8.39□□□□□ -1.07
PDLIM5-218ENST00000513341 KDM4AO75164 1064 aa8.38□□□□□ -1.07
PDLIM5-218ENST00000513341 CAPN5O15484 640 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-218ENST00000513341 CCDC24Q8N4L8 307 aa8.36□□□□□ -1.07
PDLIM5-218ENST00000513341 ERBB4Q15303 1308 aa8.35□□□□□ -1.07
PDLIM5-218ENST00000513341 VSIG8P0DPA2 414 aa8.35□□□□□ -1.07
PDLIM5-218ENST00000513341 JUNDP17535 347 aa8.35□□□□□ -1.07
PDLIM5-218ENST00000513341 MPNDQ8N594 471 aa8.34□□□□□ -1.07
PDLIM5-218ENST00000513341 EHBP1Q8NDI1 1231 aa8.34□□□□□ -1.07
PDLIM5-218ENST00000513341 BMP1P13497 986 aa8.33□□□□□ -1.08
PDLIM5-218ENST00000513341 WASF2Q9Y6W5 498 aa8.33□□□□□ -1.08
PDLIM5-218ENST00000513341 HOXA2O43364 376 aa8.32□□□□□ -1.08
PDLIM5-218ENST00000513341 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
PDLIM5-218ENST00000513341 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
PDLIM5-218ENST00000513341 NUDT12Q9BQG2 462 aa8.3□□□□□ -1.08
PDLIM5-218ENST00000513341 PTCRAQ6ISU1 281 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-218ENST00000513341 RETREG3Q86VR2 466 aa8.29□□□□□ -1.08
PDLIM5-218ENST00000513341 VEGFBP49765 207 aa8.28□□□□□ -1.08
PDLIM5-218ENST00000513341 SH3BP2P78314 561 aa8.28□□□□□ -1.08
PDLIM5-218ENST00000513341 GPIHBP1Q8IV16 184 aa8.27□□□□□ -1.09
PDLIM5-218ENST00000513341 HLA-CQ95604 372 aa8.27□□□□□ -1.09
PDLIM5-218ENST00000513341 PLEKHG3A1L390 1219 aa8.26□□□□□ -1.09
PDLIM5-218ENST00000513341 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
PDLIM5-218ENST00000513341 MRPL14Q6P1L8 145 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-218ENST00000513341 RB1CC1Q8TDY2 1594 aa8.26□□□□□ -1.09
PDLIM5-218ENST00000513341 GSK3AP49840 483 aa8.25□□□□□ -1.09
PDLIM5-218ENST00000513341 SCARF1Q14162 830 aa8.25□□□□□ -1.09
PDLIM5-218ENST00000513341 CCNYL3P0C7X3 344 aa8.24□□□□□ -1.09
PDLIM5-218ENST00000513341 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-218ENST00000513341 RTN4Q9NQC3 1192 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-218ENST00000513341 PTPRNQ16849 979 aa8.23□□□□□ -1.09
PDLIM5-218ENST00000513341 IRF6O14896 467 aa8.22□□□□□ -1.09
PDLIM5-218ENST00000513341 KLF16Q9BXK1 252 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-218ENST00000513341 EVA1BQ9NVM1 165 aa8.22□□□□□ -1.09
PDLIM5-218ENST00000513341 ADH1CP00326 375 aa8.21□□□□□ -1.1
PDLIM5-218ENST00000513341 MS4A1P11836 297 aa8.21□□□□□ -1.1
PDLIM5-218ENST00000513341 TIMP2P16035 220 aa8.21□□□□□ -1.1
PDLIM5-218ENST00000513341 GUCA2AQ02747 115 aa8.21□□□□□ -1.1
PDLIM5-218ENST00000513341 NNTQ13423 1086 aa8.21□□□□□ -1.1
PDLIM5-218ENST00000513341 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-218ENST00000513341 UNC93B1Q9H1C4 597 aa8.21□□□□□ -1.1
PDLIM5-218ENST00000513341 MDM2Q00987 491 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-218ENST00000513341 MINK1Q8N4C8 1332 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-218ENST00000513341 ZNF511Q8NB15 262 aa8.19□□□□□ -1.1
PDLIM5-218ENST00000513341 TLL2Q9Y6L7 1015 aa8.19□□□□□ -1.1
PDLIM5-218ENST00000513341 KCNH2Q12809 1159 aa8.18□□□□□ -1.1
PDLIM5-218ENST00000513341 DESI1Q6ICB0 168 aa8.18□□□□□ -1.1
PDLIM5-218ENST00000513341 PURBQ96QR8 312 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-218ENST00000513341 GPCPD1Q9NPB8 672 aa8.18□□□□□ -1.1
PDLIM5-218ENST00000513341 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-218ENST00000513341 FDX1P10109 184 aa8.17□□□□□ -1.1
PDLIM5-218ENST00000513341 CLCN1P35523 988 aa8.17□□□□□ -1.1
PDLIM5-218ENST00000513341 WDR4P57081 412 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms