RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 IFNLR1Q8IU57 520 aaPredicted RBP12.81□□□□□ -0.36
SDHC-208ENST00000513009 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
SDHC-208ENST00000513009 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
SDHC-208ENST00000513009 BCANQ96GW7 911 aa12.8□□□□□ -0.36
SDHC-208ENST00000513009 TBX22Q9Y458 520 aa12.8□□□□□ -0.36
SDHC-208ENST00000513009 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
SDHC-208ENST00000513009 RIMS2Q9UQ26 1411 aa12.79□□□□□ -0.36
SDHC-208ENST00000513009 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
SDHC-208ENST00000513009 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
SDHC-208ENST00000513009 SPATA31A6Q5VVP1 1343 aa12.79□□□□□ -0.36
SDHC-208ENST00000513009 SHPRHQ149N8 1683 aa12.79□□□□□ -0.36
SDHC-208ENST00000513009 ANKRD50Q9ULJ7 1429 aa12.79□□□□□ -0.36
SDHC-208ENST00000513009 LRP6O75581 1613 aa12.78□□□□□ -0.36
SDHC-208ENST00000513009 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.78□□□□□ -0.36
SDHC-208ENST00000513009 UNC13BO14795 1591 aa12.77□□□□□ -0.36
SDHC-208ENST00000513009 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
SDHC-208ENST00000513009 PIK3R4Q99570 1358 aa12.77□□□□□ -0.37
SDHC-208ENST00000513009 ADAMTS13Q76LX8 1427 aa12.77□□□□□ -0.37
SDHC-208ENST00000513009 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.76□□□□□ -0.37
SDHC-208ENST00000513009 E9PCH4 1651 aa12.75□□□□□ -0.37
SDHC-208ENST00000513009 ZNF772Q68DY9 489 aaPredicted RBP12.75□□□□□ -0.37
SDHC-208ENST00000513009 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
SDHC-208ENST00000513009 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
SDHC-208ENST00000513009 C19orf44Q9H6X5 657 aa12.75□□□□□ -0.37
SDHC-208ENST00000513009 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
SDHC-208ENST00000513009 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
SDHC-208ENST00000513009 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
SDHC-208ENST00000513009 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
SDHC-208ENST00000513009 TRPM2O94759 1503 aa12.72□□□□□ -0.37
SDHC-208ENST00000513009 ATMINO43313 823 aaPredicted RBP12.72□□□□□ -0.37
SDHC-208ENST00000513009 ATF3P18847 181 aa12.72□□□□□ -0.37
SDHC-208ENST00000513009 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
SDHC-208ENST00000513009 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
SDHC-208ENST00000513009 IQGAP3Q86VI3 1631 aa12.72□□□□□ -0.37
SDHC-208ENST00000513009 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
SDHC-208ENST00000513009 DCCP43146 1447 aa12.71□□□□□ -0.37
SDHC-208ENST00000513009 MEX3CQ5U5Q3 659 aaKnown RBP12.71□□□□□ -0.37
SDHC-208ENST00000513009 LHX8Q68G74 356 aa12.71□□□□□ -0.37
SDHC-208ENST00000513009 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
SDHC-208ENST00000513009 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
SDHC-208ENST00000513009 CHGAP10645 457 aaKnown RBP12.69□□□□□ -0.38
SDHC-208ENST00000513009 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
SDHC-208ENST00000513009 BRINP3Q76B58 766 aa12.69□□□□□ -0.38
SDHC-208ENST00000513009 PTPRUQ92729 1446 aa12.69□□□□□ -0.38
SDHC-208ENST00000513009 RXRBP28702 533 aa12.68□□□□□ -0.38
SDHC-208ENST00000513009 TRIM52Q96A61 297 aa12.68□□□□□ -0.38
SDHC-208ENST00000513009 AMOTL2Q9Y2J4 779 aa12.68□□□□□ -0.38
SDHC-208ENST00000513009 PCDHB13Q9Y5F0 798 aa12.68□□□□□ -0.38
SDHC-208ENST00000513009 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
SDHC-208ENST00000513009 SETD5Q9C0A6 1442 aa12.68□□□□□ -0.38
SDHC-208ENST00000513009 SETBP1Q9Y6X0 1596 aa12.68□□□□□ -0.38
SDHC-208ENST00000513009 ROCK1Q13464 1354 aa12.68□□□□□ -0.38
SDHC-208ENST00000513009 ASXL1Q8IXJ9 1541 aa12.67□□□□□ -0.38
SDHC-208ENST00000513009 NUTM2DQ5VT03 806 aaPredicted RBP12.67□□□□□ -0.38
SDHC-208ENST00000513009 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
SDHC-208ENST00000513009 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
SDHC-208ENST00000513009 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
SDHC-208ENST00000513009 MST1RQ04912 1400 aa12.65□□□□□ -0.38
SDHC-208ENST00000513009 PYGBP11216 843 aa12.65□□□□□ -0.38
SDHC-208ENST00000513009 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
SDHC-208ENST00000513009 TIE1P35590 1138 aa12.64□□□□□ -0.39
SDHC-208ENST00000513009 GSE1Q14687 1217 aa12.64□□□□□ -0.39
SDHC-208ENST00000513009 SPHKAPQ2M3C7 1700 aa12.64□□□□□ -0.39
SDHC-208ENST00000513009 AFF2P51816 1311 aa12.63□□□□□ -0.39
SDHC-208ENST00000513009 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
SDHC-208ENST00000513009 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
SDHC-208ENST00000513009 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
SDHC-208ENST00000513009 LRRC59Q96AG4 307 aaKnown RBP12.63□□□□□ -0.39
SDHC-208ENST00000513009 NUP155O75694 1391 aa12.62□□□□□ -0.39
SDHC-208ENST00000513009 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
SDHC-208ENST00000513009 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
SDHC-208ENST00000513009 LAMC1P11047 1609 aa12.61□□□□□ -0.39
SDHC-208ENST00000513009 METP08581 1390 aa12.6□□□□□ -0.39
SDHC-208ENST00000513009 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
SDHC-208ENST00000513009 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
SDHC-208ENST00000513009 RGS12O14924 1447 aa12.6□□□□□ -0.39
SDHC-208ENST00000513009 TTLL13PA6NNM8 815 aa12.59□□□□□ -0.39
SDHC-208ENST00000513009 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
SDHC-208ENST00000513009 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
SDHC-208ENST00000513009 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
SDHC-208ENST00000513009 SLC39A7Q92504 469 aa12.57□□□□□ -0.4
SDHC-208ENST00000513009 C8orf37Q96NL8 207 aa12.57□□□□□ -0.4
SDHC-208ENST00000513009 QTRT2Q9H974 415 aaKnown RBP12.57□□□□□ -0.4
SDHC-208ENST00000513009 C7P10643 843 aa12.56□□□□□ -0.4
SDHC-208ENST00000513009 KIF1BO60333 1816 aa12.55□□□□□ -0.4
SDHC-208ENST00000513009 CLTCL1P53675 1640 aa12.55□□□□□ -0.4
SDHC-208ENST00000513009 PTCH1Q13635 1447 aa12.55□□□□□ -0.4
SDHC-208ENST00000513009 C1orf167Q5SNV9 1468 aa12.55□□□□□ -0.4
SDHC-208ENST00000513009 ZNF326Q5BKZ1 582 aaKnown RBP12.55□□□□□ -0.4
SDHC-208ENST00000513009 DDX17Q92841 729 aaKnown RBP12.55□□□□□ -0.4
SDHC-208ENST00000513009 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
SDHC-208ENST00000513009 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
SDHC-208ENST00000513009 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
SDHC-208ENST00000513009 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
SDHC-208ENST00000513009 SOS2Q07890 1332 aaPredicted RBP12.54□□□□□ -0.4
SDHC-208ENST00000513009 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
SDHC-208ENST00000513009 ATAD2Q6PL18 1390 aa12.53□□□□□ -0.4
SDHC-208ENST00000513009 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
SDHC-208ENST00000513009 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
SDHC-208ENST00000513009 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms