RNA–Protein interactions for RNA: ENST00000512611.5

RAPGEF6-211, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best)

Gene RAPGEF6, Length 3,683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-211ENST00000512611 RTEL1-TNFRSF6BF6WH68 1400 aa8.7□□□□□ -1.02
RAPGEF6-211ENST00000512611 NSD3Q9BZ95 1437 aa8.7□□□□□ -1.02
RAPGEF6-211ENST00000512611 GOLGA6L3A6NEY3 463 aa8.7□□□□□ -1.02
RAPGEF6-211ENST00000512611 GAS2L3Q86XJ1 694 aa8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 CEP152O94986 1710 aa8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 SCAPERQ9BY12 1400 aa8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 CD2BP2O95400 341 aaKnown RBP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 TRIM27P14373 513 aa8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 SAFB2Q14151 953 aaKnown RBP eCLIP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 MVPQ14764 893 aaKnown RBP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 ZNF692Q9BU19 519 aaPredicted RBP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 SPAG9O60271 1321 aaKnown RBP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 POLR3AO14802 1390 aaPredicted RBP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 U2AF1L5P0DN76 240 aaPredicted RBP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 U2AF1Q01081 240 aaKnown RBP eCLIP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 EXOSC9Q06265 439 aaKnown RBP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 UPF2Q9HAU5 1272 aaKnown RBP8.69□□□□□ -1.02
RAPGEF6-211ENST00000512611 RWDD1Q9H446 243 aaPredicted RBP8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 PLXNC1O60486 1568 aa8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 FBLN1P23142 703 aa8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 SSH1Q8WYL5 1049 aa8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 NAP1L5Q96NT1 182 aaPredicted RBP8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 SHPRHQ149N8 1683 aa8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 EFCAB2Q5VUJ9 269 aa8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 ITPRIPQ8IWB1 547 aa8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 RBM42Q9BTD8 480 aaKnown RBP8.68□□□□□ -1.02
RAPGEF6-211ENST00000512611 FTSJ3Q8IY81 847 aaKnown RBP8.67□□□□□ -1.02
RAPGEF6-211ENST00000512611 PTPRTO14522 1441 aa8.67□□□□□ -1.02
RAPGEF6-211ENST00000512611 KDM5AP29375 1690 aaKnown RBP8.67□□□□□ -1.02
RAPGEF6-211ENST00000512611 SPHKAPQ2M3C7 1700 aa8.67□□□□□ -1.02
RAPGEF6-211ENST00000512611 DZIP1LQ8IYY4 767 aaKnown RBP8.67□□□□□ -1.02
RAPGEF6-211ENST00000512611 NOB1Q9ULX3 412 aaKnown RBP8.67□□□□□ -1.02
RAPGEF6-211ENST00000512611 L1TD1Q5T7N2 865 aaKnown RBP8.67□□□□□ -1.02
RAPGEF6-211ENST00000512611 SMC4Q9NTJ3 1288 aa8.67□□□□□ -1.02
RAPGEF6-211ENST00000512611 TRPM2O94759 1503 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 TMEM57Q8N5G2 664 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 LNPKQ9C0E8 428 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 IQSEC2Q5JU85 1478 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 PLCH2O75038 1416 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 ZKSCAN2Q63HK3 967 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 WDR63Q8IWG1 891 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 CABP2Q9NPB3 220 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 TRIM35Q9UPQ4 493 aa8.66□□□□□ -1.02
RAPGEF6-211ENST00000512611 U2SURPO15042 1029 aaKnown RBP8.65□□□□□ -1.02
RAPGEF6-211ENST00000512611 TNPO1Q92973 898 aaKnown RBP8.65□□□□□ -1.02
RAPGEF6-211ENST00000512611 CHMP5Q9NZZ3 219 aa8.65□□□□□ -1.02
RAPGEF6-211ENST00000512611 ABCA6Q8N139 1617 aa8.65□□□□□ -1.03
RAPGEF6-211ENST00000512611 KIF2CQ99661 725 aa8.64□□□□□ -1.03
RAPGEF6-211ENST00000512611 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
RAPGEF6-211ENST00000512611 GRPEL1Q9HAV7 217 aa8.64□□□□□ -1.03
RAPGEF6-211ENST00000512611 NOS1P29475 1434 aa8.64□□□□□ -1.03
RAPGEF6-211ENST00000512611 CD109Q6YHK3 1445 aa8.64□□□□□ -1.03
RAPGEF6-211ENST00000512611 DDIT3P35638 169 aa8.64□□□□□ -1.03
RAPGEF6-211ENST00000512611 PNNQ9H307 717 aaKnown RBP8.64□□□□□ -1.03
RAPGEF6-211ENST00000512611 CLCN1P35523 988 aa8.63□□□□□ -1.03
RAPGEF6-211ENST00000512611 PLEKHF1Q96S99 279 aa8.63□□□□□ -1.03
RAPGEF6-211ENST00000512611 NINLQ9Y2I6 1382 aa8.63□□□□□ -1.03
RAPGEF6-211ENST00000512611 ZNF518AQ6AHZ1 1483 aa8.63□□□□□ -1.03
RAPGEF6-211ENST00000512611 CFAP65Q6ZU64 1925 aaKnown RBP8.63□□□□□ -1.03
RAPGEF6-211ENST00000512611 ATF7IPQ6VMQ6 1270 aa8.62□□□□□ -1.03
RAPGEF6-211ENST00000512611 THUMPD2Q9BTF0 503 aaKnown RBP8.62□□□□□ -1.03
RAPGEF6-211ENST00000512611 ZBTB40Q9NUA8 1239 aa8.62□□□□□ -1.03
RAPGEF6-211ENST00000512611 ABCC1P33527 1531 aa8.62□□□□□ -1.03
RAPGEF6-211ENST00000512611 ELL2O00472 640 aaPredicted RBP8.62□□□□□ -1.03
RAPGEF6-211ENST00000512611 TMPOP42166 694 aaKnown RBP8.62□□□□□ -1.03
RAPGEF6-211ENST00000512611 CHAMP1Q96JM3 812 aa8.62□□□□□ -1.03
RAPGEF6-211ENST00000512611 MYH16Q9H6N6 1097 aa8.62□□□□□ -1.03
RAPGEF6-211ENST00000512611 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
RAPGEF6-211ENST00000512611 HSCBQ8IWL3 235 aa8.61□□□□□ -1.03
RAPGEF6-211ENST00000512611 SMC5Q8IY18 1101 aa8.61□□□□□ -1.03
RAPGEF6-211ENST00000512611 MAP3K4Q9Y6R4 1608 aa8.61□□□□□ -1.03
RAPGEF6-211ENST00000512611 HDAC1Q13547 482 aaPredicted RBP8.61□□□□□ -1.03
RAPGEF6-211ENST00000512611 NGEFQ8N5V2 710 aa8.61□□□□□ -1.03
RAPGEF6-211ENST00000512611 MRE11P49959 708 aa8.61□□□□□ -1.03
RAPGEF6-211ENST00000512611 ATAD2Q6PL18 1390 aa8.61□□□□□ -1.03
RAPGEF6-211ENST00000512611 STK26Q9P289 416 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 MROH2AA6NES4 1674 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 ZFYVE16Q7Z3T8 1539 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 ESPNB1AK53 854 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 SSFA2P28290 1259 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 RIPK4P57078 832 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 VSIG10Q8N0Z9 540 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 NUCB1Q02818 461 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 ANKRD45Q5TZF3 282 aa8.6□□□□□ -1.03
RAPGEF6-211ENST00000512611 PKP1Q13835 747 aa8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 GGT6Q6P531 493 aa8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 SIRT2Q8IXJ6 389 aa8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 TSPYL6Q8N831 410 aa8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 GAS2L2Q8NHY3 880 aa8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 C14orf93Q9H972 538 aaKnown RBP8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 CHD1LQ86WJ1 897 aa8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 RBM25P49756 843 aaKnown RBP8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 CFAP53Q96M91 514 aa8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 DDX19BQ9UMR2 479 aa8.59□□□□□ -1.03
RAPGEF6-211ENST00000512611 HSP90AB1P08238 724 aaKnown RBP8.58□□□□□ -1.04
RAPGEF6-211ENST00000512611 STAC3Q96MF2 364 aa8.58□□□□□ -1.04
RAPGEF6-211ENST00000512611 NCOA3Q9Y6Q9 1424 aa8.58□□□□□ -1.04
RAPGEF6-211ENST00000512611 KANK1Q14678 1352 aa8.58□□□□□ -1.04
RAPGEF6-211ENST00000512611 ZMYND15Q9H091 742 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms