RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 SLC26A8Q96RN1 970 aa18.13■□□□□ 0.49
DEPDC1B-206ENST00000512452 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
DEPDC1B-206ENST00000512452 DIP2AQ14689 1571 aa18.13■□□□□ 0.49
DEPDC1B-206ENST00000512452 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
DEPDC1B-206ENST00000512452 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
DEPDC1B-206ENST00000512452 BLMP54132 1417 aaPredicted RBP18.11■□□□□ 0.49
DEPDC1B-206ENST00000512452 NRXN1Q9ULB1 1477 aa18.1■□□□□ 0.49
DEPDC1B-206ENST00000512452 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
DEPDC1B-206ENST00000512452 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
DEPDC1B-206ENST00000512452 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
DEPDC1B-206ENST00000512452 PIK3C2BO00750 1634 aa18.09■□□□□ 0.49
DEPDC1B-206ENST00000512452 USP21Q9UK80 565 aa18.09■□□□□ 0.49
DEPDC1B-206ENST00000512452 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
DEPDC1B-206ENST00000512452 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
DEPDC1B-206ENST00000512452 SF3B2Q13435 895 aaKnown RBP18.07■□□□□ 0.48
DEPDC1B-206ENST00000512452 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
DEPDC1B-206ENST00000512452 ADAMTS2O95450 1211 aa18.05■□□□□ 0.48
DEPDC1B-206ENST00000512452 CADPS2Q86UW7 1296 aa18.05■□□□□ 0.48
DEPDC1B-206ENST00000512452 EP400Q96L91 3159 aa18.04■□□□□ 0.48
DEPDC1B-206ENST00000512452 BRINP3Q76B58 766 aa18.04■□□□□ 0.48
DEPDC1B-206ENST00000512452 C14orf37Q86TY3 774 aa18.04■□□□□ 0.48
DEPDC1B-206ENST00000512452 LRRC59Q96AG4 307 aaKnown RBP18.04■□□□□ 0.48
DEPDC1B-206ENST00000512452 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
DEPDC1B-206ENST00000512452 EIF3AQ14152 1382 aaKnown RBP18.04■□□□□ 0.48
DEPDC1B-206ENST00000512452 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
DEPDC1B-206ENST00000512452 KTN1Q86UP2 1357 aaKnown RBP18.03■□□□□ 0.48
DEPDC1B-206ENST00000512452 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
DEPDC1B-206ENST00000512452 BCL9LQ86UU0 1499 aa18.02■□□□□ 0.48
DEPDC1B-206ENST00000512452 PPLO60437 1756 aa18.02■□□□□ 0.48
DEPDC1B-206ENST00000512452 ATF3P18847 181 aa18.02■□□□□ 0.48
DEPDC1B-206ENST00000512452 TESK2Q96S53 571 aa18.02■□□□□ 0.48
DEPDC1B-206ENST00000512452 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
DEPDC1B-206ENST00000512452 TMF1P82094 1093 aa18■□□□□ 0.47
DEPDC1B-206ENST00000512452 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
DEPDC1B-206ENST00000512452 ATRNO75882 1429 aa17.98■□□□□ 0.47
DEPDC1B-206ENST00000512452 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
DEPDC1B-206ENST00000512452 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
DEPDC1B-206ENST00000512452 CDCA8Q53HL2 280 aa17.98■□□□□ 0.47
DEPDC1B-206ENST00000512452 C19orf44Q9H6X5 657 aa17.98■□□□□ 0.47
DEPDC1B-206ENST00000512452 STAG3Q9UJ98 1225 aa17.98■□□□□ 0.47
DEPDC1B-206ENST00000512452 CFAP65Q6ZU64 1925 aaKnown RBP17.98■□□□□ 0.47
DEPDC1B-206ENST00000512452 PIK3C2GO75747 1445 aa17.98■□□□□ 0.47
DEPDC1B-206ENST00000512452 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
DEPDC1B-206ENST00000512452 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
DEPDC1B-206ENST00000512452 ZNF784Q8NCA9 323 aaPredicted RBP17.97■□□□□ 0.47
DEPDC1B-206ENST00000512452 BCANQ96GW7 911 aa17.97■□□□□ 0.47
DEPDC1B-206ENST00000512452 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.46
DEPDC1B-206ENST00000512452 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
DEPDC1B-206ENST00000512452 NEXMIFQ5QGS0 1516 aa17.94■□□□□ 0.46
DEPDC1B-206ENST00000512452 VGFO15240 615 aaPredicted RBP17.93■□□□□ 0.46
DEPDC1B-206ENST00000512452 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
DEPDC1B-206ENST00000512452 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
DEPDC1B-206ENST00000512452 R3HDM1Q15032 1099 aaKnown RBP17.92■□□□□ 0.46
DEPDC1B-206ENST00000512452 POLR3GLQ9BT43 218 aa17.92■□□□□ 0.46
DEPDC1B-206ENST00000512452 C14orf93Q9H972 538 aaKnown RBP17.92■□□□□ 0.46
DEPDC1B-206ENST00000512452 TMEM131LA2VDJ0 1609 aa17.91■□□□□ 0.46
DEPDC1B-206ENST00000512452 RALBP1Q15311 655 aa17.91■□□□□ 0.46
DEPDC1B-206ENST00000512452 IDI1Q13907 227 aa17.9■□□□□ 0.46
DEPDC1B-206ENST00000512452 CFAP70Q5T0N1 1121 aa17.9■□□□□ 0.46
DEPDC1B-206ENST00000512452 GJD4Q96KN9 370 aaPredicted RBP17.9■□□□□ 0.46
DEPDC1B-206ENST00000512452 ADGRB1O14514 1584 aa17.89■□□□□ 0.45
DEPDC1B-206ENST00000512452 BAG6P46379 1132 aa17.89■□□□□ 0.45
DEPDC1B-206ENST00000512452 ASXL1Q8IXJ9 1541 aa17.88■□□□□ 0.45
DEPDC1B-206ENST00000512452 GTF3C3Q9Y5Q9 886 aa17.88■□□□□ 0.45
DEPDC1B-206ENST00000512452 CHD2O14647 1828 aaKnown RBP17.88■□□□□ 0.45
DEPDC1B-206ENST00000512452 DDX17Q92841 729 aaKnown RBP17.86■□□□□ 0.45
DEPDC1B-206ENST00000512452 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
DEPDC1B-206ENST00000512452 BRD4O60885 1362 aaPredicted RBP17.84■□□□□ 0.45
DEPDC1B-206ENST00000512452 PER1O15534 1290 aaPredicted RBP17.84■□□□□ 0.45
DEPDC1B-206ENST00000512452 PTCH1Q13635 1447 aa17.83■□□□□ 0.45
DEPDC1B-206ENST00000512452 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.45
DEPDC1B-206ENST00000512452 MYBBP1AQ9BQG0 1328 aaKnown RBP17.82■□□□□ 0.44
DEPDC1B-206ENST00000512452 CENPJQ9HC77 1338 aaPredicted RBP17.81■□□□□ 0.44
DEPDC1B-206ENST00000512452 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
DEPDC1B-206ENST00000512452 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
DEPDC1B-206ENST00000512452 MYO5BQ9ULV0 1848 aa17.79■□□□□ 0.44
DEPDC1B-206ENST00000512452 PANK3Q9H999 370 aa17.79■□□□□ 0.44
DEPDC1B-206ENST00000512452 CCDC184Q52MB2 194 aa17.78■□□□□ 0.44
DEPDC1B-206ENST00000512452 MYOM1P52179 1685 aa17.77■□□□□ 0.44
DEPDC1B-206ENST00000512452 EN1Q05925 392 aaPredicted RBP17.77■□□□□ 0.44
DEPDC1B-206ENST00000512452 TBX22Q9Y458 520 aa17.77■□□□□ 0.44
DEPDC1B-206ENST00000512452 QRICH2Q9H0J4 1663 aa17.77■□□□□ 0.43
DEPDC1B-206ENST00000512452 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
DEPDC1B-206ENST00000512452 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
DEPDC1B-206ENST00000512452 BRWD3Q6RI45 1802 aa17.76■□□□□ 0.43
DEPDC1B-206ENST00000512452 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
DEPDC1B-206ENST00000512452 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
DEPDC1B-206ENST00000512452 INSRP06213 1382 aa17.75■□□□□ 0.43
DEPDC1B-206ENST00000512452 ARHGEF28Q8N1W1 1705 aaKnown RBP17.75■□□□□ 0.43
DEPDC1B-206ENST00000512452 DCCP43146 1447 aa17.74■□□□□ 0.43
DEPDC1B-206ENST00000512452 MST1RQ04912 1400 aa17.74■□□□□ 0.43
DEPDC1B-206ENST00000512452 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.74■□□□□ 0.43
DEPDC1B-206ENST00000512452 TMC1Q8TDI8 760 aa17.74■□□□□ 0.43
DEPDC1B-206ENST00000512452 PLEKHG1Q9ULL1 1385 aa17.73■□□□□ 0.43
DEPDC1B-206ENST00000512452 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
DEPDC1B-206ENST00000512452 RIMS2Q9UQ26 1411 aa17.72■□□□□ 0.43
DEPDC1B-206ENST00000512452 LRPPRCP42704 1394 aaKnown RBP17.72■□□□□ 0.43
DEPDC1B-206ENST00000512452 NINLQ9Y2I6 1382 aa17.72■□□□□ 0.43
DEPDC1B-206ENST00000512452 KRT27Q7Z3Y8 459 aa17.72■□□□□ 0.43
DEPDC1B-206ENST00000512452 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms