RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 BCAR3O75815 825 aa13.37□□□□□ -0.27
CPNE4-209ENST00000512055 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
CPNE4-209ENST00000512055 PLCD4Q9BRC7 762 aa13.36□□□□□ -0.27
CPNE4-209ENST00000512055 AEBP2Q6ZN18 517 aaPredicted RBP13.36□□□□□ -0.27
CPNE4-209ENST00000512055 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
CPNE4-209ENST00000512055 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.36□□□□□ -0.27
CPNE4-209ENST00000512055 SLC52A1Q9NWF4 448 aa13.36□□□□□ -0.27
CPNE4-209ENST00000512055 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
CPNE4-209ENST00000512055 SYAP1Q96A49 352 aaPredicted RBP13.36□□□□□ -0.27
CPNE4-209ENST00000512055 CABP1Q9NZU7 370 aa13.36□□□□□ -0.27
CPNE4-209ENST00000512055 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
CPNE4-209ENST00000512055 SAMD9Q5K651 1589 aa13.35□□□□□ -0.27
CPNE4-209ENST00000512055 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
CPNE4-209ENST00000512055 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
CPNE4-209ENST00000512055 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
CPNE4-209ENST00000512055 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
CPNE4-209ENST00000512055 FANCAO15360 1455 aa13.35□□□□□ -0.27
CPNE4-209ENST00000512055 MAP7D2Q96T17 732 aa13.34□□□□□ -0.27
CPNE4-209ENST00000512055 CDK19Q9BWU1 502 aa13.34□□□□□ -0.27
CPNE4-209ENST00000512055 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
CPNE4-209ENST00000512055 ANKRD45Q5TZF3 282 aa13.34□□□□□ -0.27
CPNE4-209ENST00000512055 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
CPNE4-209ENST00000512055 TPM3P06753 285 aa13.33□□□□□ -0.28
CPNE4-209ENST00000512055 NPHP1O15259 732 aa13.33□□□□□ -0.28
CPNE4-209ENST00000512055 TSR2Q969E8 191 aaKnown RBP13.33□□□□□ -0.28
CPNE4-209ENST00000512055 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
CPNE4-209ENST00000512055 TPM4P67936 248 aa13.32□□□□□ -0.28
CPNE4-209ENST00000512055 PLCH2O75038 1416 aa13.32□□□□□ -0.28
CPNE4-209ENST00000512055 RDXP35241 583 aaKnown RBP13.32□□□□□ -0.28
CPNE4-209ENST00000512055 DDX19BQ9UMR2 479 aa13.31□□□□□ -0.28
CPNE4-209ENST00000512055 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
CPNE4-209ENST00000512055 RPGRIP1LQ68CZ1 1315 aa13.31□□□□□ -0.28
CPNE4-209ENST00000512055 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
CPNE4-209ENST00000512055 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
CPNE4-209ENST00000512055 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
CPNE4-209ENST00000512055 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
CPNE4-209ENST00000512055 NUP160Q12769 1436 aa13.3□□□□□ -0.28
CPNE4-209ENST00000512055 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
CPNE4-209ENST00000512055 PZPP20742 1482 aa13.3□□□□□ -0.28
CPNE4-209ENST00000512055 FBXO31Q5XUX0 539 aaPredicted RBP13.3□□□□□ -0.28
CPNE4-209ENST00000512055 IDI1Q13907 227 aa13.3□□□□□ -0.28
CPNE4-209ENST00000512055 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
CPNE4-209ENST00000512055 H0YHG0 523 aa13.3□□□□□ -0.28
CPNE4-209ENST00000512055 ZNF592Q92610 1267 aa13.3□□□□□ -0.28
CPNE4-209ENST00000512055 CCDC191Q8NCU4 936 aa13.29□□□□□ -0.28
CPNE4-209ENST00000512055 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
CPNE4-209ENST00000512055 HMMRO75330 724 aa13.29□□□□□ -0.28
CPNE4-209ENST00000512055 DHX29Q7Z478 1369 aaKnown RBP13.28□□□□□ -0.28
CPNE4-209ENST00000512055 MCCP23508 829 aa13.28□□□□□ -0.28
CPNE4-209ENST00000512055 GSE1Q14687 1217 aa13.28□□□□□ -0.28
CPNE4-209ENST00000512055 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
CPNE4-209ENST00000512055 RALGAPBQ86X10 1494 aa13.28□□□□□ -0.28
CPNE4-209ENST00000512055 CCDC66A2RUB6 948 aa13.28□□□□□ -0.28
CPNE4-209ENST00000512055 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
CPNE4-209ENST00000512055 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.28
CPNE4-209ENST00000512055 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.28
CPNE4-209ENST00000512055 C20orf194Q5TEA3 1177 aa13.27□□□□□ -0.28
CPNE4-209ENST00000512055 SKAP1Q86WV1 359 aa13.27□□□□□ -0.28
CPNE4-209ENST00000512055 NOS1P29475 1434 aa13.27□□□□□ -0.28
CPNE4-209ENST00000512055 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.29
CPNE4-209ENST00000512055 GNAI1P63096 354 aa13.27□□□□□ -0.29
CPNE4-209ENST00000512055 NEFHP12036 1026 aa13.26□□□□□ -0.29
CPNE4-209ENST00000512055 CREBRFQ8IUR6 639 aa13.26□□□□□ -0.29
CPNE4-209ENST00000512055 LNPKQ9C0E8 428 aa13.26□□□□□ -0.29
CPNE4-209ENST00000512055 PRAG1Q86YV5 1406 aa13.26□□□□□ -0.29
CPNE4-209ENST00000512055 SLFN5Q08AF3 891 aa13.26□□□□□ -0.29
CPNE4-209ENST00000512055 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
CPNE4-209ENST00000512055 SCAF11Q99590 1463 aaKnown RBP13.25□□□□□ -0.29
CPNE4-209ENST00000512055 KIF16BQ96L93 1317 aa13.25□□□□□ -0.29
CPNE4-209ENST00000512055 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
CPNE4-209ENST00000512055 NLRP6P59044 892 aa13.25□□□□□ -0.29
CPNE4-209ENST00000512055 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
CPNE4-209ENST00000512055 CEP89Q96ST8 783 aa13.25□□□□□ -0.29
CPNE4-209ENST00000512055 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
CPNE4-209ENST00000512055 PSME1Q06323 249 aa13.24□□□□□ -0.29
CPNE4-209ENST00000512055 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
CPNE4-209ENST00000512055 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
CPNE4-209ENST00000512055 KDM5BQ9UGL1 1544 aa13.24□□□□□ -0.29
CPNE4-209ENST00000512055 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
CPNE4-209ENST00000512055 ZNF526Q8TF50 670 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-209ENST00000512055 TESK2Q96S53 571 aa13.24□□□□□ -0.29
CPNE4-209ENST00000512055 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
CPNE4-209ENST00000512055 RRS1Q15050 365 aaKnown RBP13.23□□□□□ -0.29
CPNE4-209ENST00000512055 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
CPNE4-209ENST00000512055 RTEL1-TNFRSF6BF6WH68 1400 aa13.23□□□□□ -0.29
CPNE4-209ENST00000512055 KIAA1211Q6ZU35 1233 aa13.22□□□□□ -0.29
CPNE4-209ENST00000512055 NOL8Q76FK4 1167 aaKnown RBP13.22□□□□□ -0.29
CPNE4-209ENST00000512055 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
CPNE4-209ENST00000512055 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
CPNE4-209ENST00000512055 TEFQ10587 303 aa13.22□□□□□ -0.29
CPNE4-209ENST00000512055 FAM43AQ8N2R8 423 aa13.22□□□□□ -0.29
CPNE4-209ENST00000512055 C14orf93Q9H972 538 aaKnown RBP13.22□□□□□ -0.29
CPNE4-209ENST00000512055 NOB1Q9ULX3 412 aaKnown RBP13.22□□□□□ -0.29
CPNE4-209ENST00000512055 WDR63Q8IWG1 891 aa13.21□□□□□ -0.29
CPNE4-209ENST00000512055 ATAD2Q6PL18 1390 aa13.21□□□□□ -0.29
CPNE4-209ENST00000512055 SHANK2Q9UPX8 1470 aa13.21□□□□□ -0.29
CPNE4-209ENST00000512055 SULT6B1Q6IMI4 303 aa13.21□□□□□ -0.3
CPNE4-209ENST00000512055 TEX14Q8IWB6 1497 aa13.21□□□□□ -0.3
CPNE4-209ENST00000512055 FKBP5Q13451 457 aaPredicted RBP13.21□□□□□ -0.3
CPNE4-209ENST00000512055 CCDC70Q6NSX1 233 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms