RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 SPATA31D1Q6ZQQ2 1576 aa12.92□□□□□ -0.34
NR1I3-230ENST00000511944 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
NR1I3-230ENST00000511944 SLC52A1Q9NWF4 448 aa12.92□□□□□ -0.34
NR1I3-230ENST00000511944 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
NR1I3-230ENST00000511944 POTEFA5A3E0 1075 aa12.91□□□□□ -0.34
NR1I3-230ENST00000511944 SOX12O15370 315 aa12.91□□□□□ -0.34
NR1I3-230ENST00000511944 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
NR1I3-230ENST00000511944 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
NR1I3-230ENST00000511944 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
NR1I3-230ENST00000511944 LAMC1P11047 1609 aa12.91□□□□□ -0.34
NR1I3-230ENST00000511944 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
NR1I3-230ENST00000511944 SYNMO15061 1565 aa12.9□□□□□ -0.34
NR1I3-230ENST00000511944 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
NR1I3-230ENST00000511944 KIF1BO60333 1816 aa12.9□□□□□ -0.34
NR1I3-230ENST00000511944 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
NR1I3-230ENST00000511944 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-230ENST00000511944 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-230ENST00000511944 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-230ENST00000511944 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
NR1I3-230ENST00000511944 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
NR1I3-230ENST00000511944 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
NR1I3-230ENST00000511944 IER5LQ5T953 404 aa12.87□□□□□ -0.35
NR1I3-230ENST00000511944 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
NR1I3-230ENST00000511944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.87□□□□□ -0.35
NR1I3-230ENST00000511944 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
NR1I3-230ENST00000511944 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
NR1I3-230ENST00000511944 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
NR1I3-230ENST00000511944 DCAF11Q8TEB1 546 aa12.86□□□□□ -0.35
NR1I3-230ENST00000511944 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
NR1I3-230ENST00000511944 TRPM1Q7Z4N2 1603 aa12.86□□□□□ -0.35
NR1I3-230ENST00000511944 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
NR1I3-230ENST00000511944 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 PPP1R37O75864 691 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 NLRP6P59044 892 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 PDCD7Q8N8D1 485 aaKnown RBP12.85□□□□□ -0.35
NR1I3-230ENST00000511944 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 METRNQ9UJH8 293 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 UGGT1Q9NYU2 1555 aa12.85□□□□□ -0.35
NR1I3-230ENST00000511944 ZMYM3Q14202 1370 aa12.84□□□□□ -0.35
NR1I3-230ENST00000511944 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
NR1I3-230ENST00000511944 C7P10643 843 aa12.83□□□□□ -0.36
NR1I3-230ENST00000511944 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
NR1I3-230ENST00000511944 TMEM131LA2VDJ0 1609 aa12.82□□□□□ -0.36
NR1I3-230ENST00000511944 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
NR1I3-230ENST00000511944 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
NR1I3-230ENST00000511944 PPLO60437 1756 aa12.81□□□□□ -0.36
NR1I3-230ENST00000511944 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
NR1I3-230ENST00000511944 RGL3Q3MIN7 710 aa12.8□□□□□ -0.36
NR1I3-230ENST00000511944 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
NR1I3-230ENST00000511944 ROCK2O75116 1388 aaKnown RBP12.8□□□□□ -0.36
NR1I3-230ENST00000511944 FER1L4A9Z1Z3 1794 aa12.79□□□□□ -0.36
NR1I3-230ENST00000511944 TNRQ92752 1358 aa12.79□□□□□ -0.36
NR1I3-230ENST00000511944 USP47Q96K76 1375 aa12.79□□□□□ -0.36
NR1I3-230ENST00000511944 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
NR1I3-230ENST00000511944 IDI1Q13907 227 aa12.78□□□□□ -0.36
NR1I3-230ENST00000511944 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
NR1I3-230ENST00000511944 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.37
NR1I3-230ENST00000511944 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
NR1I3-230ENST00000511944 SEC24BO95487 1268 aa12.76□□□□□ -0.37
NR1I3-230ENST00000511944 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
NR1I3-230ENST00000511944 PLCG2P16885 1265 aa12.76□□□□□ -0.37
NR1I3-230ENST00000511944 MLECQ14165 292 aa12.76□□□□□ -0.37
NR1I3-230ENST00000511944 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
NR1I3-230ENST00000511944 A2ML1A8K2U0 1454 aa12.76□□□□□ -0.37
NR1I3-230ENST00000511944 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-230ENST00000511944 C3P01024 1663 aa12.75□□□□□ -0.37
NR1I3-230ENST00000511944 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
NR1I3-230ENST00000511944 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
NR1I3-230ENST00000511944 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
NR1I3-230ENST00000511944 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
NR1I3-230ENST00000511944 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
NR1I3-230ENST00000511944 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
NR1I3-230ENST00000511944 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-230ENST00000511944 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
NR1I3-230ENST00000511944 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
NR1I3-230ENST00000511944 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
NR1I3-230ENST00000511944 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
NR1I3-230ENST00000511944 SBNO2Q9Y2G9 1366 aa12.71□□□□□ -0.37
NR1I3-230ENST00000511944 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
NR1I3-230ENST00000511944 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
NR1I3-230ENST00000511944 C14orf93Q9H972 538 aaKnown RBP12.71□□□□□ -0.37
NR1I3-230ENST00000511944 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
NR1I3-230ENST00000511944 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
NR1I3-230ENST00000511944 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
NR1I3-230ENST00000511944 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
NR1I3-230ENST00000511944 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
NR1I3-230ENST00000511944 SLIT1O75093 1534 aa12.69□□□□□ -0.38
NR1I3-230ENST00000511944 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
NR1I3-230ENST00000511944 ZNF142P52746 1687 aaPredicted RBP12.68□□□□□ -0.38
NR1I3-230ENST00000511944 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
NR1I3-230ENST00000511944 TMEM2Q9UHN6 1383 aa12.68□□□□□ -0.38
NR1I3-230ENST00000511944 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
NR1I3-230ENST00000511944 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
NR1I3-230ENST00000511944 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
NR1I3-230ENST00000511944 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
NR1I3-230ENST00000511944 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms